Cow genome map
| Conread name: | Ova1-OVRM10163B02 |
| Conread position: | 296-565 |
| Cow position: | chr25:18010029-18009773 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 130, 12 |
| Conread position: | 325-565 |
| Cow position: | chr25:6260873-6260636 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 223, 164 |
| Conread position: | 326-572 |
| Cow position: | chr25:22569498-22569742 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 190, 0 |
| Conread position: | 328-569 |
| Cow position: | chr25:26951433-26951194 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 328-573 |
| Cow position: | chr25:6130937-6131185 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 331-521 |
| Cow position: | chr25:22809317-22809504 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 174, 66 |
| Conread position: | 331-521 |
| Cow position: | chr25:22816564-22816751 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 174, 66 |
| Conread position: | 332-471 |
| Cow position: | chr25:5779388-5779522 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 332-483 |
| Cow position: | chr25:21956324-21956174 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 332-544 |
| Cow position: | chr25:8544007-8544218 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 332-564 |
| Cow position: | chr25:36035206-36035439 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 187 |
| Conread position: | 332-572 |
| Cow position: | chr25:7222044-7221806 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 151 |
| Conread position: | 332-572 |
| Cow position: | chr25:26243734-26243500 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 335-461 |
| Cow position: | chr25:6067079-6066954 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 335-572 |
| Cow position: | chr25:22585486-22585258 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 33, 111 |
| Conread position: | 336-568 |
| Cow position: | chr25:9152-8916 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 171 |
| Conread position: | 339-563 |
| Cow position: | chr25:16805799-16805583 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 165, 36 |
| Conread position: | 340-563 |
| Cow position: | chr25:5783517-5783723 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 10, 19 |
| Conread position: | 349-572 |
| Cow position: | chr25:11256311-11256093 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 59, 7 |
| Conread position: | 353-573 |
| Cow position: | chr25:16155136-16155349 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 19, 135 |
| Conread position: | 367-576 |
| Cow position: | chr25:36075896-36075688 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 149, 99 |
| Conread position: | 379-565 |
| Cow position: | chr25:24605054-24604870 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 133, 15 |
| Conread position: | 379-569 |
| Cow position: | chr25:27495697-27495888 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 169, 154 |
| Conread position: | 388-564 |
| Cow position: | chr25:31246983-31246809 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 124, 27 |
| Conread position: | 389-530 |
| Cow position: | chr25:14530856-14530717 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 64 |
| Conread position: | 390-563 |
| Cow position: | chr25:10292204-10292376 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 115, 24 |
| Conread position: | 390-564 |
| Cow position: | chr25:24580525-24580698 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 41, 109 |
| Conread position: | 408-565 |
| Cow position: | chr25:15456162-15456005 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 422-565 |
| Cow position: | chr25:16164338-16164477 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 83, 105 |
| Conread position: | 422-573 |
| Cow position: | chr25:11321358-11321209 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 424-564 |
| Cow position: | chr25:15656834-15656980 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 433-564 |
| Cow position: | chr25:21653613-21653482 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 79, 105 |
Show alignments to all cow chromosomes.