Cow genome map
| Conread name: | Ova1-OVRM10163B02 |
| Conread position: | 312-564 |
| Cow position: | chr3:19236513-19236263 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 92, 11 |
| Conread position: | 320-579 |
| Cow position: | chr3:23938396-23938657 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 64, 138 |
| Conread position: | 327-561 |
| Cow position: | chr3:22703081-22702858 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 327-573 |
| Cow position: | chr3:36415937-36416184 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 221, 206 |
| Conread position: | 328-460 |
| Cow position: | chr3:58594685-58594553 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 28, 127 |
| Conread position: | 328-572 |
| Cow position: | chr3:7837479-7837711 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 332-550 |
| Cow position: | chr3:26586205-26586413 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 332-563 |
| Cow position: | chr3:19230135-19229917 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 180, 19 |
| Conread position: | 332-564 |
| Cow position: | chr3:14185476-14185246 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 60, 87 |
| Conread position: | 332-564 |
| Cow position: | chr3:28926189-28926401 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 332-565 |
| Cow position: | chr3:4126863-4127088 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 332-565 |
| Cow position: | chr3:37256012-37256239 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 332-565 |
| Cow position: | chr3:69220186-69220409 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 332-572 |
| Cow position: | chr3:52026586-52026819 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 19 |
| Conread position: | 332-573 |
| Cow position: | chr3:75077028-75077252 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 332-575 |
| Cow position: | chr3:27387700-27387957 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 66, 181 |
| Conread position: | 333-564 |
| Cow position: | chr3:3643460-3643689 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 333-565 |
| Cow position: | chr3:7865348-7865121 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 15, 58 |
| Conread position: | 334-572 |
| Cow position: | chr3:63270879-63270649 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 214, 30 |
| Conread position: | 339-564 |
| Cow position: | chr3:22699730-22699513 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 136, 12 |
| Conread position: | 340-572 |
| Cow position: | chr3:61462821-61463050 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 30 |
| Conread position: | 352-486 |
| Cow position: | chr3:35151154-35151021 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 353-480 |
| Cow position: | chr3:36543791-36543918 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 375-572 |
| Cow position: | chr3:2682746-2682934 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 165, 29 |
| Conread position: | 375-572 |
| Cow position: | chr3:68544147-68544337 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 181, 77 |
| Conread position: | 378-565 |
| Cow position: | chr3:5052334-5052149 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 151 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 379-585 |
| Cow position: | chr3:74797382-74797587 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 164 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 199, 44 |
| Conread position: | 389-552 |
| Cow position: | chr3:9255388-9255228 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 116, 25 |
| Conread position: | 390-565 |
| Cow position: | chr3:45839625-45839453 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 397-551 |
| Cow position: | chr3:7829836-7829991 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 78, 82 |
| Conread position: | 423-568 |
| Cow position: | chr3:67815576-67815431 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 82, 109 |
| Conread position: | 424-572 |
| Cow position: | chr3:33568050-33568194 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 446-599 |
| Cow position: | chr3:58594330-58594176 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 134, 88 |
Show alignments to all cow chromosomes.