Cow genome map
| Conread name: | Ova1-OVRM10163B02 |
| Conread position: | 272-562 |
| Cow position: | chr6:45338138-45338417 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 37, 159 |
| Conread position: | 312-462 |
| Cow position: | chr6:27906622-27906473 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 114, 85 |
| Conread position: | 325-554 |
| Cow position: | chr6:11087197-11086970 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 74, 193 |
| Conread position: | 326-462 |
| Cow position: | chr6:18788866-18789003 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 43, 129 |
| Conread position: | 326-468 |
| Cow position: | chr6:27047605-27047744 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 326-565 |
| Cow position: | chr6:22602019-22602254 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 176, 0 |
| Conread position: | 326-565 |
| Cow position: | chr6:23899082-23899317 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 22, 66 |
| Conread position: | 331-448 |
| Cow position: | chr6:8814327-8814209 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 332-448 |
| Cow position: | chr6:60062886-60063001 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 332-533 |
| Cow position: | chr6:14716672-14716860 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 332-562 |
| Cow position: | chr6:4066320-4066549 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 60, 26 |
| Conread position: | 332-563 |
| Cow position: | chr6:60174639-60174871 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 62, 124 |
| Conread position: | 332-565 |
| Cow position: | chr6:19012399-19012172 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 57, 81 |
| Conread position: | 332-565 |
| Cow position: | chr6:26207346-26207582 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 19 |
| Conread position: | 332-565 |
| Cow position: | chr6:49166801-49167041 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 129 |
| Conread position: | 332-565 |
| Cow position: | chr6:61642757-61642986 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 332-573 |
| Cow position: | chr6:26224049-26224286 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 61, 71 |
| Conread position: | 332-603 |
| Cow position: | chr6:60258484-60258757 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 203 |
| Conread position: | 333-589 |
| Cow position: | chr6:44820067-44819816 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 190 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 142, 97 |
| Conread position: | 334-563 |
| Cow position: | chr6:16550736-16550961 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 147, 141 |
| Conread position: | 335-557 |
| Cow position: | chr6:67736619-67736404 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 169, 44 |
| Conread position: | 337-564 |
| Cow position: | chr6:58035595-58035822 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 55, 11 |
| Conread position: | 339-534 |
| Cow position: | chr6:42932123-42932316 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 346-562 |
| Cow position: | chr6:20676020-20676234 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 61, 55 |
| Conread position: | 361-529 |
| Cow position: | chr6:26938114-26937951 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 31, 123 |
| Conread position: | 371-577 |
| Cow position: | chr6:44686475-44686279 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 373-572 |
| Cow position: | chr6:49544672-49544478 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 88, 81 |
| Conread position: | 379-572 |
| Cow position: | chr6:2869878-2870068 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 96, 102 |
| Conread position: | 386-518 |
| Cow position: | chr6:5668066-5667935 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 388-557 |
| Cow position: | chr6:1012807-1012643 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 117, 17 |
Show alignments to all cow chromosomes.