Cow genome map
| Conread name: | Ova1-OVRM10163B02 |
| Conread position: | 326-572 |
| Cow position: | chr8:54009598-54009831 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 326-573 |
| Cow position: | chr8:48978708-48978470 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 188 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 328-448 |
| Cow position: | chr8:51241564-51241444 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 329-545 |
| Cow position: | chr8:7676662-7676873 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 100, 94 |
| Conread position: | 331-572 |
| Cow position: | chr8:1626266-1626507 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 34 |
| Conread position: | 332-485 |
| Cow position: | chr8:30550271-30550424 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 21 |
| Conread position: | 332-559 |
| Cow position: | chr8:21056453-21056667 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 173, 47 |
| Conread position: | 332-572 |
| Cow position: | chr8:26082686-26082451 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 168, 55 |
| Conread position: | 332-572 |
| Cow position: | chr8:40324700-40324458 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 332-573 |
| Cow position: | chr8:49793207-49793450 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 85, 144 |
| Conread position: | 332-581 |
| Cow position: | chr8:50704834-50704574 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 80, 152 |
| Conread position: | 332-595 |
| Cow position: | chr8:6569094-6569351 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 333-564 |
| Cow position: | chr8:27827593-27827366 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 333-565 |
| Cow position: | chr8:35511751-35511536 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 334-557 |
| Cow position: | chr8:55930053-55930275 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 17, 43 |
| Conread position: | 334-572 |
| Cow position: | chr8:13847377-13847140 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 0 |
| Conread position: | 335-565 |
| Cow position: | chr8:4127514-4127745 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 55, 80 |
| Conread position: | 339-564 |
| Cow position: | chr8:12840696-12840485 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 54, 20 |
| Conread position: | 340-472 |
| Cow position: | chr8:4052529-4052656 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 345-563 |
| Cow position: | chr8:26829748-26829534 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 115, 45 |
| Conread position: | 346-491 |
| Cow position: | chr8:38367653-38367508 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 346-548 |
| Cow position: | chr8:52022801-52022607 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 353-557 |
| Cow position: | chr8:13324144-13324338 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 201, 13 |
| Conread position: | 353-572 |
| Cow position: | chr8:5519002-5519216 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 358-572 |
| Cow position: | chr8:9294684-9294469 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 191, 175 |
| Conread position: | 386-485 |
| Cow position: | chr8:45858188-45858287 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 389-564 |
| Cow position: | chr8:54315889-54315718 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 58, 41 |
| Conread position: | 395-562 |
| Cow position: | chr8:5655021-5655191 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 395-564 |
| Cow position: | chr8:30563635-30563812 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 110, 18 |
| Conread position: | 399-572 |
| Cow position: | chr8:25582226-25582061 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 60, 0 |
Show alignments to all cow chromosomes.