Cow genome map
| Conread name: | Ova1-OVRM10163B02 |
| Conread position: | 325-569 |
| Cow position: | chr9:23518887-23518652 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 224, 6 |
| Conread position: | 328-432 |
| Cow position: | chr9:5147534-5147430 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 331-547 |
| Cow position: | chr9:56294089-56294294 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 331-568 |
| Cow position: | chr9:36396749-36396986 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 17 |
| Conread position: | 332-472 |
| Cow position: | chr9:31297703-31297841 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 39, 79 |
| Conread position: | 332-506 |
| Cow position: | chr9:46990389-46990225 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 332-546 |
| Cow position: | chr9:25794375-25794583 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 19, 25 |
| Conread position: | 332-550 |
| Cow position: | chr9:7798549-7798764 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 332-551 |
| Cow position: | chr9:25574542-25574748 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 332-562 |
| Cow position: | chr9:10290379-10290150 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 170, 79 |
| Conread position: | 332-564 |
| Cow position: | chr9:6126967-6126746 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 177 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 332-564 |
| Cow position: | chr9:6134099-6133872 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 332-564 |
| Cow position: | chr9:51279835-51280067 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 60, 43 |
| Conread position: | 332-566 |
| Cow position: | chr9:9733439-9733207 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 44, 110 |
| Conread position: | 332-572 |
| Cow position: | chr9:45406722-45406955 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 215, 47 |
| Conread position: | 332-576 |
| Cow position: | chr9:44609781-44610018 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 333-573 |
| Cow position: | chr9:41954037-41954269 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 122 |
| Conread position: | 334-562 |
| Cow position: | chr9:36426073-36426300 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 42, 56 |
| Conread position: | 335-563 |
| Cow position: | chr9:46090651-46090438 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 335-565 |
| Cow position: | chr9:50822604-50822377 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 211, 76 |
| Conread position: | 335-583 |
| Cow position: | chr9:63662311-63662072 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 337-487 |
| Cow position: | chr9:25800369-25800515 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 337-541 |
| Cow position: | chr9:61851727-61851515 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 337-565 |
| Cow position: | chr9:21499745-21499526 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 175, 46 |
| Conread position: | 339-599 |
| Cow position: | chr9:15223890-15223632 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 341-572 |
| Cow position: | chr9:6590059-6590292 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 344-533 |
| Cow position: | chr9:36681733-36681913 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 172, 31 |
| Conread position: | 359-555 |
| Cow position: | chr9:10160364-10160173 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 88, 132 |
| Conread position: | 382-608 |
| Cow position: | chr9:5478707-5478922 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 387-560 |
| Cow position: | chr9:54107932-54107763 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 125, 27 |
| Conread position: | 393-564 |
| Cow position: | chr9:26528557-26528726 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 8, 130 |
| Conread position: | 408-568 |
| Cow position: | chr9:51276173-51276012 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 69, 0 |
Show alignments to all cow chromosomes.