Cow genome map
| Conread name: | Ova1-OVRM10163B02 |
| Conread position: | 324-565 |
| Cow position: | chrX:38741146-38740909 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 130 |
| Conread position: | 326-485 |
| Cow position: | chrX:6999608-6999449 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 87, 73 |
| Conread position: | 326-565 |
| Cow position: | chrX:832314-832080 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 22, 65 |
| Conread position: | 328-484 |
| Cow position: | chrX:34635519-34635675 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 329-564 |
| Cow position: | chrX:38674909-38674673 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 22 |
| Conread position: | 330-564 |
| Cow position: | chrX:19738139-19737916 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 214, 7 |
| Conread position: | 331-565 |
| Cow position: | chrX:33159070-33158835 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 332-478 |
| Cow position: | chrX:31910710-31910861 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 332-529 |
| Cow position: | chrX:40315863-40315666 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 61, 39 |
| Conread position: | 332-541 |
| Cow position: | chrX:19046065-19046258 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 332-564 |
| Cow position: | chrX:27529608-27529380 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 122 |
| Conread position: | 332-564 |
| Cow position: | chrX:34767790-34768040 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 332-568 |
| Cow position: | chrX:12834981-12834755 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 16, 20 |
| Conread position: | 332-572 |
| Cow position: | chrX:3450796-3451037 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 17, 28 |
| Conread position: | 332-572 |
| Cow position: | chrX:34704449-34704680 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 205, 42 |
| Conread position: | 332-586 |
| Cow position: | chrX:1742930-1743190 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 42, 101 |
| Conread position: | 332-595 |
| Cow position: | chrX:35981697-35981440 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 333-556 |
| Cow position: | chrX:29815819-29815598 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 334-542 |
| Cow position: | chrX:25180430-25180225 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 161 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 335-565 |
| Cow position: | chrX:3513271-3513499 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 71, 63 |
| Conread position: | 336-488 |
| Cow position: | chrX:10062244-10062092 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 336-538 |
| Cow position: | chrX:37251484-37251283 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 39, 162 |
| Conread position: | 336-564 |
| Cow position: | chrX:16893598-16893374 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 337-564 |
| Cow position: | chrX:38129237-38129469 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 55, 140 |
| Conread position: | 339-448 |
| Cow position: | chrX:23320511-23320402 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 346-557 |
| Cow position: | chrX:34213818-34213611 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 76, 35 |
| Conread position: | 353-572 |
| Cow position: | chrX:29145481-29145266 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 74, 61 |
| Conread position: | 382-514 |
| Cow position: | chrX:29539082-29538950 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-573 |
| Cow position: | chrX:36874174-36873990 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 131, 105 |
| Conread position: | 398-584 |
| Cow position: | chrX:25179639-25179460 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 399-529 |
| Cow position: | chrX:34626619-34626749 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 416-573 |
| Cow position: | chrX:33008535-33008382 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 452-564 |
| Cow position: | chrX:31911096-31911208 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.