Cow genome map
| Conread name: | Ova1-OVRM10173D01 |
| Conread position: | 243-676 |
| Cow position: | chr1:41181373-41181809 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 306 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 18, 44 |
| Conread position: | 244-677 |
| Cow position: | chr1:52039168-52039597 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 96 |
| Conread position: | 254-668 |
| Cow position: | chr1:36613731-36613319 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 293 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 46, 73 |
| Conread position: | 263-677 |
| Cow position: | chr1:93499178-93499588 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 277 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 109, 33 |
| Conread position: | 264-678 |
| Cow position: | chr1:86113851-86113439 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 37, 11 |
| Conread position: | 271-533 |
| Cow position: | chr1:53208141-53207868 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 274-672 |
| Cow position: | chr1:31765830-31765427 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 273 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 25, 56 |
| Conread position: | 277-532 |
| Cow position: | chr1:22826734-22826995 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 95, 52 |
| Conread position: | 277-619 |
| Cow position: | chr1:67577643-67577967 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 245 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 23, 53 |
| Conread position: | 277-678 |
| Cow position: | chr1:57698892-57698482 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 288 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 20, 49 |
| Conread position: | 277-679 |
| Cow position: | chr1:82504535-82504943 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 297 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 278-445 |
| Cow position: | chr1:71818939-71818763 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 278-455 |
| Cow position: | chr1:53041136-53040952 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 45 |
| Conread position: | 278-465 |
| Cow position: | chr1:35785606-35785796 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 94, 59 |
| Conread position: | 278-483 |
| Cow position: | chr1:84170069-84170278 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 278-501 |
| Cow position: | chr1:34397232-34397013 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 157, 94 |
| Conread position: | 278-508 |
| Cow position: | chr1:99628256-99628013 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 22, 69 |
| Conread position: | 278-532 |
| Cow position: | chr1:95017950-95017690 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 23, 150 |
| Conread position: | 278-533 |
| Cow position: | chr1:1981544-1981283 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 22, 46 |
| Conread position: | 278-533 |
| Cow position: | chr1:2075759-2075501 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 94, 51 |
| Conread position: | 278-533 |
| Cow position: | chr1:9437979-9437722 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 23, 55 |
| Conread position: | 278-533 |
| Cow position: | chr1:37309949-37309684 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 22, 71 |
| Conread position: | 278-533 |
| Cow position: | chr1:61721804-61721539 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 64 |
| Conread position: | 278-534 |
| Cow position: | chr1:44083633-44083899 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 26, 138 |
| Conread position: | 278-658 |
| Cow position: | chr1:56718882-56719257 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 46 |
| Conread position: | 278-662 |
| Cow position: | chr1:71691381-71691761 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 56 |
| Conread position: | 278-666 |
| Cow position: | chr1:80336674-80336291 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 285 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 94, 21 |
| Conread position: | 278-668 |
| Cow position: | chr1:94226981-94226596 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 61 |
| Conread position: | 278-671 |
| Cow position: | chr1:68253158-68253550 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 23, 55 |
| Conread position: | 278-672 |
| Cow position: | chr1:21678719-21679112 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 267 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 22, 58 |
| Conread position: | 278-674 |
| Cow position: | chr1:57969510-57969092 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 23, 318 |
| Conread position: | 278-675 |
| Cow position: | chr1:67821650-67821248 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 288 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 20, 55 |
| Conread position: | 278-676 |
| Cow position: | chr1:21577380-21577773 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 278-676 |
| Cow position: | chr1:44164643-44165046 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 78, 108 |
| Conread position: | 278-676 |
| Cow position: | chr1:56228819-56229209 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 291 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 22, 46 |
| Conread position: | 278-676 |
| Cow position: | chr1:76223124-76222726 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 281 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 22, 55 |
| Conread position: | 278-676 |
| Cow position: | chr1:92370794-92370395 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 70 |
| Conread position: | 278-677 |
| Cow position: | chr1:665938-666330 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 46 |
| Conread position: | 278-677 |
| Cow position: | chr1:41696628-41697023 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 20, 55 |
| Conread position: | 278-677 |
| Cow position: | chr1:53308830-53308429 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 39 |
| Conread position: | 278-677 |
| Cow position: | chr1:53397551-53397950 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 292 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 22, 49 |
| Conread position: | 278-677 |
| Cow position: | chr1:74822017-74822414 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 292 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 22, 63 |
| Conread position: | 278-677 |
| Cow position: | chr1:79844036-79844431 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 278-677 |
| Cow position: | chr1:84255325-84255728 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 20, 55 |
| Conread position: | 278-677 |
| Cow position: | chr1:95499930-95499529 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 293 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 26, 55 |
| Conread position: | 278-679 |
| Cow position: | chr1:15311433-15311836 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 69 |
| Conread position: | 278-679 |
| Cow position: | chr1:20001187-20000785 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 9, 132 |
| Conread position: | 278-679 |
| Cow position: | chr1:24235950-24235552 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 285 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 18, 42 |
| Conread position: | 278-679 |
| Cow position: | chr1:44769547-44769145 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 63 |
| Conread position: | 278-679 |
| Cow position: | chr1:48731269-48730861 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 286 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 22, 183 |
| Conread position: | 278-679 |
| Cow position: | chr1:49795570-49795967 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 269 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 22, 112 |
| Conread position: | 278-679 |
| Cow position: | chr1:53424754-53425143 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 289 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 16, 177 |
| Conread position: | 278-679 |
| Cow position: | chr1:54258139-54258529 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 287 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 20, 47 |
| Conread position: | 278-679 |
| Cow position: | chr1:55163493-55163882 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 293 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 26, 18 |
| Conread position: | 278-679 |
| Cow position: | chr1:55429416-55428992 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 52 |
| Conread position: | 278-679 |
| Cow position: | chr1:57639934-57639550 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 278-679 |
| Cow position: | chr1:75966977-75967398 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 290 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 22, 72 |
| Conread position: | 278-679 |
| Cow position: | chr1:81180414-81180005 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 94, 21 |
| Conread position: | 278-679 |
| Cow position: | chr1:82338249-82337814 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 299 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 278-679 |
| Cow position: | chr1:95176502-95176902 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 290 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 21, 51 |
| Conread position: | 279-533 |
| Cow position: | chr1:30034119-30034372 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 21, 51 |
| Conread position: | 279-533 |
| Cow position: | chr1:38418646-38418902 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 21, 51 |
| Conread position: | 279-672 |
| Cow position: | chr1:99136861-99136471 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 283 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 93, 53 |
| Conread position: | 279-677 |
| Cow position: | chr1:61564361-61564761 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 64 |
| Conread position: | 279-678 |
| Cow position: | chr1:101551018-101551421 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 255 |
| Conread position: | 279-679 |
| Cow position: | chr1:22728617-22729018 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 288 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 20, 54 |
| Conread position: | 279-679 |
| Cow position: | chr1:54199812-54199415 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 272 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 25, 209 |
| Conread position: | 280-447 |
| Cow position: | chr1:52054654-52054832 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 20, 67 |
| Conread position: | 280-454 |
| Cow position: | chr1:55146109-55146291 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 19, 79 |
| Conread position: | 280-482 |
| Cow position: | chr1:85142385-85142174 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 10 |
| Conread position: | 280-526 |
| Cow position: | chr1:12419895-12419638 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 18, 26 |
| Conread position: | 280-668 |
| Cow position: | chr1:88338258-88338644 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 216 |
| Conread position: | 280-678 |
| Cow position: | chr1:53520471-53520878 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 284 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 20, 183 |
| Conread position: | 280-678 |
| Cow position: | chr1:55357717-55357319 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 305 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 20, 182 |
| Conread position: | 280-679 |
| Cow position: | chr1:11873785-11873395 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 277 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 20, 107 |
| Conread position: | 280-679 |
| Cow position: | chr1:15547040-15547438 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 276 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 21, 50 |
| Conread position: | 280-679 |
| Cow position: | chr1:31499190-31499589 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 286 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 28, 267 |
| Conread position: | 280-679 |
| Cow position: | chr1:84240475-84240859 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 287 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 20, 63 |
| Conread position: | 281-618 |
| Cow position: | chr1:40062016-40062349 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 252 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 19, 49 |
| Conread position: | 281-666 |
| Cow position: | chr1:42874377-42874001 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 282 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 19, 52 |
| Conread position: | 281-677 |
| Cow position: | chr1:71946794-71946410 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 275 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 19, 53 |
| Conread position: | 282-679 |
| Cow position: | chr1:23634325-23633944 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 287 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 18, 42 |
| Conread position: | 283-444 |
| Cow position: | chr1:52994549-52994720 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 283-679 |
| Cow position: | chr1:19465632-19466023 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 17, 243 |
| Conread position: | 285-534 |
| Cow position: | chr1:8130125-8129875 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 13, 48 |
| Conread position: | 286-533 |
| Cow position: | chr1:56225047-56225302 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 195 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 15, 165 |
| Conread position: | 286-533 |
| Cow position: | chr1:100813210-100812952 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 194 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 287-533 |
| Cow position: | chr1:24202153-24201912 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 14, 46 |
| Conread position: | 289-533 |
| Cow position: | chr1:88028869-88029110 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 10, 41 |
| Conread position: | 290-679 |
| Cow position: | chr1:78795174-78794775 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 288 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 10, 40 |
| Conread position: | 297-454 |
| Cow position: | chr1:73216413-73216253 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 67, 61 |
| Conread position: | 297-677 |
| Cow position: | chr1:63391185-63390806 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 266 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 73, 43 |
| Conread position: | 298-679 |
| Cow position: | chr1:102350181-102349787 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 74, 28 |
| Conread position: | 303-468 |
| Cow position: | chr1:23999950-23999794 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 303-679 |
| Cow position: | chr1:3340518-3340902 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 40 |
| Conread position: | 306-533 |
| Cow position: | chr1:22823536-22823764 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 68, 19 |
| Conread position: | 306-679 |
| Cow position: | chr1:8349718-8349350 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 272 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 43, 123 |
| Conread position: | 307-512 |
| Cow position: | chr1:45244107-45244314 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 56, 51 |
| Conread position: | 307-666 |
| Cow position: | chr1:57646271-57646623 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 65, 185 |
| Conread position: | 307-679 |
| Cow position: | chr1:13638065-13637698 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 65, 24 |
| Conread position: | 309-537 |
| Cow position: | chr1:46821606-46821843 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 61, 110 |
| Conread position: | 315-679 |
| Cow position: | chr1:93810022-93810397 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 38, 33 |
| Conread position: | 325-648 |
| Cow position: | chr1:35844319-35843992 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 18, 103 |
| Conread position: | 325-670 |
| Cow position: | chr1:44136841-44136508 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 47, 14 |
| Conread position: | 327-677 |
| Cow position: | chr1:31348820-31348475 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 6 |
| Conread position: | 327-677 |
| Cow position: | chr1:82884772-82884425 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 47, 11 |
| Conread position: | 334-532 |
| Cow position: | chr1:98412569-98412767 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 40, 101 |
| Conread position: | 334-533 |
| Cow position: | chr1:29462465-29462679 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 38, 82 |
| Conread position: | 334-676 |
| Cow position: | chr1:3035372-3035029 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 95 |
| Conread position: | 334-679 |
| Cow position: | chr1:34159453-34159802 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 38, 114 |
| Conread position: | 334-679 |
| Cow position: | chr1:53374052-53374398 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 248 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 38, 221 |
| Conread position: | 334-679 |
| Cow position: | chr1:72069208-72068872 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 38, 204 |
| Conread position: | 335-533 |
| Cow position: | chr1:41138734-41138528 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 35, 76 |
| Conread position: | 369-533 |
| Cow position: | chr1:63311225-63311390 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 386-534 |
| Cow position: | chr1:60986648-60986799 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 386-672 |
| Cow position: | chr1:83982697-83982410 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 107, 63 |
| Conread position: | 386-677 |
| Cow position: | chr1:7350217-7350507 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 98, 136 |
| Conread position: | 386-677 |
| Cow position: | chr1:20204704-20204992 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 74, 160 |
| Conread position: | 386-677 |
| Cow position: | chr1:21508070-21508356 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 126, 90 |
| Conread position: | 386-677 |
| Cow position: | chr1:57901058-57900775 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 93, 60 |
| Conread position: | 386-677 |
| Cow position: | chr1:74947466-74947158 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 69, 85 |
| Conread position: | 386-678 |
| Cow position: | chr1:69695327-69695026 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 93, 51 |
| Conread position: | 386-679 |
| Cow position: | chr1:45289192-45288905 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 97, 70 |
| Conread position: | 386-679 |
| Cow position: | chr1:69539376-69539664 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 35, 31 |
| Conread position: | 386-679 |
| Cow position: | chr1:73960379-73960672 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 87, 152 |
| Conread position: | 386-679 |
| Cow position: | chr1:95215497-95215214 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 98, 26 |
| Conread position: | 386-679 |
| Cow position: | chr1:100705815-100706100 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 127, 22 |
| Conread position: | 387-533 |
| Cow position: | chr1:69264502-69264648 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 126, 134 |
| Conread position: | 387-617 |
| Cow position: | chr1:81579439-81579662 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 34, 30 |
| Conread position: | 387-679 |
| Cow position: | chr1:31934187-31934479 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 24, 164 |
| Conread position: | 388-533 |
| Cow position: | chr1:37726692-37726548 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 18, 52 |
| Conread position: | 393-677 |
| Cow position: | chr1:84282747-84283039 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 92, 155 |
| Conread position: | 394-533 |
| Cow position: | chr1:91370789-91370649 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 394-679 |
| Cow position: | chr1:79663977-79663702 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 90, 61 |
| Conread position: | 395-679 |
| Cow position: | chr1:22448896-22448620 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 181, 89 |
| Conread position: | 396-679 |
| Cow position: | chr1:18937144-18936868 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 86, 66 |
| Conread position: | 406-663 |
| Cow position: | chr1:33811633-33811880 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 78, 116 |
| Conread position: | 415-679 |
| Cow position: | chr1:1991722-1991455 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 44, 133 |
| Conread position: | 415-679 |
| Cow position: | chr1:90640733-90640998 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 99, 106 |
| Conread position: | 420-670 |
| Cow position: | chr1:24528884-24528650 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 420-672 |
| Cow position: | chr1:64678413-64678655 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 62, 19 |
| Conread position: | 422-676 |
| Cow position: | chr1:34000620-34000876 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 57, 121 |
| Conread position: | 422-679 |
| Cow position: | chr1:4027576-4027834 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 57, 212 |
| Conread position: | 424-679 |
| Cow position: | chr1:46940142-46939892 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 56, 15 |
| Conread position: | 431-615 |
| Cow position: | chr1:84786495-84786668 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 175, 103 |
| Conread position: | 432-649 |
| Cow position: | chr1:32631195-32631404 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 81, 43 |
| Conread position: | 433-677 |
| Cow position: | chr1:89510206-89509959 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 145, 111 |
| Conread position: | 446-677 |
| Cow position: | chr1:80899847-80900082 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 120, 98 |
| Conread position: | 446-678 |
| Cow position: | chr1:41252664-41252441 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 38, 76 |
| Conread position: | 446-679 |
| Cow position: | chr1:45535441-45535672 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 38, 46 |
| Conread position: | 446-679 |
| Cow position: | chr1:95327414-95327184 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 105 |
| Conread position: | 449-672 |
| Cow position: | chr1:51628760-51628539 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 31, 86 |
| Conread position: | 449-679 |
| Cow position: | chr1:79165350-79165118 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 35, 87 |
| Conread position: | 451-679 |
| Cow position: | chr1:68827161-68826938 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 452-676 |
| Cow position: | chr1:77657811-77658031 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 112, 100 |
| Conread position: | 452-679 |
| Cow position: | chr1:52994769-52994987 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 153, 90 |
| Conread position: | 458-679 |
| Cow position: | chr1:55146552-55146769 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 27, 87 |
| Conread position: | 464-679 |
| Cow position: | chr1:20799629-20799852 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 20, 80 |
| Conread position: | 541-675 |
| Cow position: | chr1:26896010-26895864 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
Show alignments to all cow chromosomes.