Cow genome map

Conread name: Ova1-OVRM10173D01

Conread position: 263-536
Cow position: chr13:21135286-21135567 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 37, 240

Conread position: 278-442
Cow position: chr13:58742704-58742877 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 21, 45

Conread position: 278-454
Cow position: chr13:9734374-9734190 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 63

Conread position: 278-454
Cow position: chr13:42201088-42200903 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 22, 30

Conread position: 278-455
Cow position: chr13:53069933-53069743 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 278-512
Cow position: chr13:11795136-11794894 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 55

Conread position: 278-532
Cow position: chr13:185935-185674 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 202
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 22, 202

Conread position: 278-533
Cow position: chr13:24729373-24729114 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 22, 52

Conread position: 278-533
Cow position: chr13:35525787-35526052 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 14, 56

Conread position: 278-533
Cow position: chr13:36352564-36352805 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 22, 52

Conread position: 278-533
Cow position: chr13:42085238-42084975 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 21, 46

Conread position: 278-533
Cow position: chr13:47007313-47007571 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 21, 60

Conread position: 278-533
Cow position: chr13:47313321-47313072 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 52

Conread position: 278-614
Cow position: chr13:8195532-8195181 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 243
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 20, 52

Conread position: 278-631
Cow position: chr13:25453595-25453249 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 256
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 22, 55

Conread position: 278-661
Cow position: chr13:57493759-57494145 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 270
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 22, 55

Conread position: 278-664
Cow position: chr13:21402365-21402756 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 281
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 22, 58

Conread position: 278-674
Cow position: chr13:12233027-12233422 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 294
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 20, 180

Conread position: 278-674
Cow position: chr13:20377917-20378306 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 277
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 52

Conread position: 278-676
Cow position: chr13:34941232-34941624 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 49

Conread position: 278-677
Cow position: chr13:17800498-17800101 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 272
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 21, 30

Conread position: 278-677
Cow position: chr13:19426273-19426669 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 270
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 22, 66

Conread position: 278-677
Cow position: chr13:20665966-20666358 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 268
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 22, 109

Conread position: 278-677
Cow position: chr13:34282105-34281703 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 284
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 22, 46

Conread position: 278-677
Cow position: chr13:61976543-61976938 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 264
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 23, 58

Conread position: 278-678
Cow position: chr13:60429657-60430049 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 282
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 23, 52

Conread position: 278-679
Cow position: chr13:6974596-6974185 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 273

Conread position: 278-679
Cow position: chr13:16015240-16014838 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 285
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 21, 52

Conread position: 278-679
Cow position: chr13:20563416-20563020 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 295
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 22, 52

Conread position: 278-679
Cow position: chr13:24754315-24753907 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 316

Conread position: 278-679
Cow position: chr13:25248713-25249130 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 71

Conread position: 278-679
Cow position: chr13:25531365-25531763 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 28

Conread position: 278-679
Cow position: chr13:32017117-32017501 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 52

Conread position: 278-679
Cow position: chr13:34052171-34052565 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 40

Conread position: 278-679
Cow position: chr13:37516715-37517112 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 46

Conread position: 278-679
Cow position: chr13:40722259-40722686 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 278
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 21, 39

Conread position: 278-679
Cow position: chr13:43762596-43762195 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 281
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 22, 52

Conread position: 278-679
Cow position: chr13:45353455-45353068 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 264
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 51

Conread position: 278-679
Cow position: chr13:46182198-46181816 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 281
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 22, 51

Conread position: 278-679
Cow position: chr13:48945130-48944695 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 293
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 23, 71

Conread position: 278-679
Cow position: chr13:51941159-51940761 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 35

Conread position: 278-679
Cow position: chr13:54237762-54237380 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 274
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 22, 52

Conread position: 278-679
Cow position: chr13:60690292-60690702 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 306
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 22, 55

Conread position: 279-446
Cow position: chr13:38013102-38012925 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 280-533
Cow position: chr13:20879413-20879669 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 20, 70

Conread position: 280-669
Cow position: chr13:40943666-40943279 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 267
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 20, 67

Conread position: 280-669
Cow position: chr13:52585602-52585987 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 268
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 28, 50

Conread position: 280-677
Cow position: chr13:34262960-34263341 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 273
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 92, 49

Conread position: 280-677
Cow position: chr13:37483841-37484245 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 285
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 20, 45

Conread position: 280-679
Cow position: chr13:34261678-34261255 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 287
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 20, 205

Conread position: 281-447
Cow position: chr13:57444631-57444803 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 19, 146

Conread position: 281-532
Cow position: chr13:48378171-48378406 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 17, 47

Conread position: 281-613
Cow position: chr13:13261437-13261104 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 246
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 19, 52

Conread position: 281-679
Cow position: chr13:61170303-61170696 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 292
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 19, 46

Conread position: 282-679
Cow position: chr13:51902038-51901617 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 23

Conread position: 283-679
Cow position: chr13:5752001-5752401 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 82

Conread position: 285-533
Cow position: chr13:5910301-5910550 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 130

Conread position: 285-676
Cow position: chr13:12546488-12546883 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 284
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 15, 45

Conread position: 291-533
Cow position: chr13:46525047-46525277 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 9, 26

Conread position: 303-533
Cow position: chr13:9900702-9900467 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 188
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 71, 9

Conread position: 303-679
Cow position: chr13:20649589-20649959 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 263
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 51, 26

Conread position: 306-512
Cow position: chr13:24285954-24285748 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 34, 20

Conread position: 324-677
Cow position: chr13:562753-563116 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 257
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 50, 102

Conread position: 328-503
Cow position: chr13:27018995-27018809 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 334-536
Cow position: chr13:1570839-1570630 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 92

Conread position: 334-677
Cow position: chr13:31814239-31813904 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 242
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 38, 103

Conread position: 337-679
Cow position: chr13:10988703-10989051 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 238
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 37, 156

Conread position: 339-679
Cow position: chr13:17158495-17158850 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 251
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 35, 220

Conread position: 350-677
Cow position: chr13:17855730-17855400 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 237
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 22, 83

Conread position: 350-679
Cow position: chr13:1042598-1042941 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 24, 0

Conread position: 384-677
Cow position: chr13:15172093-15172384 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 207
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 9, 72

Conread position: 386-533
Cow position: chr13:889871-890014 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 98, 49

Conread position: 386-676
Cow position: chr13:17613659-17613371 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 93, 159

Conread position: 386-677
Cow position: chr13:18835499-18835219 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 98, 159

Conread position: 386-677
Cow position: chr13:27524949-27525238 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 214, 158

Conread position: 386-678
Cow position: chr13:21039290-21039576 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 195
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 187, 55

Conread position: 386-679
Cow position: chr13:2774431-2774152 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 219
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 31

Conread position: 386-679
Cow position: chr13:5091349-5091641 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 98, 34

Conread position: 386-679
Cow position: chr13:12448675-12448970 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 212
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 61, 115

Conread position: 386-679
Cow position: chr13:42229632-42229346 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 127, 63

Conread position: 390-679
Cow position: chr13:6153470-6153758 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 196
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 90, 161

Conread position: 393-659
Cow position: chr13:14927543-14927280 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 91, 66

Conread position: 393-669
Cow position: chr13:13089329-13089062 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 200
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 120, 124

Conread position: 402-533
Cow position: chr13:25817810-25817678 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 402-679
Cow position: chr13:25537938-25537651 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 79, 103

Conread position: 409-663
Cow position: chr13:38485117-38484872 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 203, 30

Conread position: 416-679
Cow position: chr13:9265529-9265804 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 184
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 153

Conread position: 424-679
Cow position: chr13:18244129-18243886 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 60, 7

Conread position: 433-677
Cow position: chr13:15041206-15041447 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 112

Conread position: 446-677
Cow position: chr13:48037873-48037648 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 76

Conread position: 446-679
Cow position: chr13:26261541-26261774 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 89

Conread position: 446-679
Cow position: chr13:43184620-43184847 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 11

Conread position: 449-677
Cow position: chr13:42200868-42200646 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 130, 95

Conread position: 449-679
Cow position: chr13:25927042-25926818 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 96

Conread position: 450-676
Cow position: chr13:23166848-23167069 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 154
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 117, 94

Conread position: 450-679
Cow position: chr13:38012610-38012382 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 95

Conread position: 456-679
Cow position: chr13:24776534-24776307 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 59

Conread position: 457-679
Cow position: chr13:15974852-15974637 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 78

Conread position: 458-679
Cow position: chr13:2462991-2463208 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 149
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 6, 0

Show alignments to all cow chromosomes.