Cow genome map
| Conread name: | Ova1-OVRM10173D01 |
| Conread position: | 251-534 |
| Cow position: | chr14:13464758-13465036 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 53, 25 |
| Conread position: | 277-679 |
| Cow position: | chr14:43046631-43046230 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 23, 165 |
| Conread position: | 278-450 |
| Cow position: | chr14:20827441-20827261 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 71, 17 |
| Conread position: | 278-451 |
| Cow position: | chr14:34984323-34984140 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 278-454 |
| Cow position: | chr14:4991744-4991558 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 278-467 |
| Cow position: | chr14:44083775-44083973 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 22, 139 |
| Conread position: | 278-508 |
| Cow position: | chr14:34355001-34355241 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 22, 217 |
| Conread position: | 278-512 |
| Cow position: | chr14:22982377-22982128 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 278-532 |
| Cow position: | chr14:18811632-18811895 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 20, 46 |
| Conread position: | 278-533 |
| Cow position: | chr14:13427287-13427042 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 18, 63 |
| Conread position: | 278-533 |
| Cow position: | chr14:21534564-21534817 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 25, 49 |
| Conread position: | 278-533 |
| Cow position: | chr14:22074538-22074799 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 278-533 |
| Cow position: | chr14:33834575-33834317 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 22, 51 |
| Conread position: | 278-533 |
| Cow position: | chr14:36776086-36775823 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 22, 55 |
| Conread position: | 278-533 |
| Cow position: | chr14:46304816-46305083 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 20, 154 |
| Conread position: | 278-533 |
| Cow position: | chr14:49563182-49563446 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 22, 71 |
| Conread position: | 278-536 |
| Cow position: | chr14:39774573-39774835 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 22, 50 |
| Conread position: | 278-663 |
| Cow position: | chr14:44237217-44237608 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 283 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 278-672 |
| Cow position: | chr14:28796151-28795763 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 259 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 87, 77 |
| Conread position: | 278-673 |
| Cow position: | chr14:40230155-40230551 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 22, 53 |
| Conread position: | 278-675 |
| Cow position: | chr14:28988173-28987781 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 278-676 |
| Cow position: | chr14:6599469-6599868 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 285 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 18, 55 |
| Conread position: | 278-676 |
| Cow position: | chr14:20069034-20069431 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 279 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 22, 134 |
| Conread position: | 278-676 |
| Cow position: | chr14:44382715-44383119 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 20, 227 |
| Conread position: | 278-676 |
| Cow position: | chr14:44741903-44742299 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 21, 219 |
| Conread position: | 278-677 |
| Cow position: | chr14:14326624-14327025 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 27, 21 |
| Conread position: | 278-677 |
| Cow position: | chr14:39779229-39778839 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 50 |
| Conread position: | 278-677 |
| Cow position: | chr14:46735799-46735388 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 274 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 21, 50 |
| Conread position: | 278-679 |
| Cow position: | chr14:5836419-5835991 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 305 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 21, 63 |
| Conread position: | 278-679 |
| Cow position: | chr14:14621697-14622098 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 69 |
| Conread position: | 278-679 |
| Cow position: | chr14:20600869-20600468 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 251 |
| Conread position: | 278-679 |
| Cow position: | chr14:25779585-25779179 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 269 |
| Conread position: | 278-679 |
| Cow position: | chr14:28378844-28378442 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 283 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 278-679 |
| Cow position: | chr14:33538445-33538841 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 55 |
| Conread position: | 278-679 |
| Cow position: | chr14:34199350-34199767 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 170 |
| Conread position: | 278-679 |
| Cow position: | chr14:41756740-41756341 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 270 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 51, 85 |
| Conread position: | 279-678 |
| Cow position: | chr14:41471486-41471889 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 19, 69 |
| Conread position: | 279-679 |
| Cow position: | chr14:22381072-22381470 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 282 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 22, 51 |
| Conread position: | 280-548 |
| Cow position: | chr14:26160434-26160716 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 20, 191 |
| Conread position: | 280-593 |
| Cow position: | chr14:19512907-19513214 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 20, 50 |
| Conread position: | 280-663 |
| Cow position: | chr14:24581419-24581023 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 274 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 20, 113 |
| Conread position: | 280-676 |
| Cow position: | chr14:6490225-6490625 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 284 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 90, 17 |
| Conread position: | 280-679 |
| Cow position: | chr14:8754808-8754410 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 47 |
| Conread position: | 280-679 |
| Cow position: | chr14:10912502-10912883 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 20, 47 |
| Conread position: | 281-663 |
| Cow position: | chr14:25885981-25885607 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 19, 49 |
| Conread position: | 281-673 |
| Cow position: | chr14:7647552-7647940 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 19, 253 |
| Conread position: | 281-678 |
| Cow position: | chr14:42918584-42918172 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 291 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 17, 270 |
| Conread position: | 281-679 |
| Cow position: | chr14:24992292-24991904 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 18, 49 |
| Conread position: | 281-679 |
| Cow position: | chr14:46489777-46490178 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 19, 78 |
| Conread position: | 282-679 |
| Cow position: | chr14:45605576-45605173 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 274 |
| Conread position: | 290-679 |
| Cow position: | chr14:36554687-36555074 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 271 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 10, 40 |
| Conread position: | 291-679 |
| Cow position: | chr14:9020498-9020109 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 9, 142 |
| Conread position: | 303-532 |
| Cow position: | chr14:42785399-42785163 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 71, 46 |
| Conread position: | 303-679 |
| Cow position: | chr14:19862984-19863351 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 122 |
| Conread position: | 306-675 |
| Cow position: | chr14:20009865-20010223 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 250 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 68, 23 |
| Conread position: | 306-677 |
| Cow position: | chr14:22989488-22989118 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 66, 28 |
| Conread position: | 312-649 |
| Cow position: | chr14:28566050-28565722 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 47, 59 |
| Conread position: | 313-679 |
| Cow position: | chr14:39616458-39616811 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 256 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 61, 144 |
| Conread position: | 315-678 |
| Cow position: | chr14:19618308-19618667 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 268 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 59, 105 |
| Conread position: | 319-679 |
| Cow position: | chr14:19222328-19221963 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 175 |
| Conread position: | 319-679 |
| Cow position: | chr14:38921370-38921033 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 68, 43 |
| Conread position: | 335-679 |
| Cow position: | chr14:20640190-20640545 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 246 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 39, 222 |
| Conread position: | 336-677 |
| Cow position: | chr14:26432820-26433156 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 38, 52 |
| Conread position: | 350-677 |
| Cow position: | chr14:21285038-21284707 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 237 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 24, 97 |
| Conread position: | 368-679 |
| Cow position: | chr14:24786316-24786023 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 10, 27 |
| Conread position: | 385-533 |
| Cow position: | chr14:31130017-31130166 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 386-633 |
| Cow position: | chr14:37151269-37151515 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 64, 158 |
| Conread position: | 386-673 |
| Cow position: | chr14:11982024-11981729 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 96, 159 |
| Conread position: | 386-676 |
| Cow position: | chr14:20016337-20016620 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 93, 37 |
| Conread position: | 388-533 |
| Cow position: | chr14:23080156-23080299 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 96, 51 |
| Conread position: | 388-533 |
| Cow position: | chr14:37640601-37640455 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 391-676 |
| Cow position: | chr14:17013874-17013589 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 88, 134 |
| Conread position: | 392-677 |
| Cow position: | chr14:48427441-48427157 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 92, 153 |
| Conread position: | 394-544 |
| Cow position: | chr14:41179858-41179707 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 395-677 |
| Cow position: | chr14:19633542-19633263 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 89, 54 |
| Conread position: | 436-679 |
| Cow position: | chr14:22967072-22966834 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 137, 106 |
| Conread position: | 437-677 |
| Cow position: | chr14:49021584-49021819 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 137, 77 |
| Conread position: | 457-679 |
| Cow position: | chr14:19624390-19624167 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 27, 88 |
| Conread position: | 457-679 |
| Cow position: | chr14:33773753-33773968 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 149, 34 |
| Conread position: | 458-679 |
| Cow position: | chr14:14187632-14187414 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 26, 64 |
| Conread position: | 478-679 |
| Cow position: | chr14:19129789-19129591 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 98, 66 |
Show alignments to all cow chromosomes.