Cow genome map
| Conread name: | Ova1-OVRM10173D01 |
| Conread position: | 235-615 |
| Cow position: | chr15:29542569-29542198 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 275 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 9, 27 |
| Conread position: | 249-679 |
| Cow position: | chr15:4138685-4138261 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 295 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 50, 31 |
| Conread position: | 263-539 |
| Cow position: | chr15:33228630-33228353 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 17, 35 |
| Conread position: | 267-677 |
| Cow position: | chr15:24044552-24044966 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 300 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 33, 66 |
| Conread position: | 278-369 |
| Cow position: | chr15:45220700-45220608 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 80 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 278-465 |
| Cow position: | chr15:53116982-53116792 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 96, 23 |
| Conread position: | 278-471 |
| Cow position: | chr15:33526004-33525811 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 91, 62 |
| Conread position: | 278-503 |
| Cow position: | chr15:32878028-32878264 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 278-525 |
| Cow position: | chr15:23775423-23775683 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 21, 250 |
| Conread position: | 278-530 |
| Cow position: | chr15:5692240-5691983 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 278-532 |
| Cow position: | chr15:10442063-10442321 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 22, 55 |
| Conread position: | 278-533 |
| Cow position: | chr15:16583177-16583442 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 200 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 22, 149 |
| Conread position: | 278-533 |
| Cow position: | chr15:28039273-28039025 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 22, 70 |
| Conread position: | 278-533 |
| Cow position: | chr15:38876149-38876418 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 46 |
| Conread position: | 278-533 |
| Cow position: | chr15:52197786-52198044 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 22, 106 |
| Conread position: | 278-540 |
| Cow position: | chr15:14757625-14757904 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 278-628 |
| Cow position: | chr15:7191727-7192072 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 251 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 22, 271 |
| Conread position: | 278-672 |
| Cow position: | chr15:15881449-15881064 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 21, 50 |
| Conread position: | 278-672 |
| Cow position: | chr15:21831895-21832292 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 278-672 |
| Cow position: | chr15:33285396-33285014 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 281 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 278-677 |
| Cow position: | chr15:143704-144105 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 283 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 21, 55 |
| Conread position: | 278-677 |
| Cow position: | chr15:1329577-1329972 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 286 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 278-679 |
| Cow position: | chr15:13285577-13285147 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 290 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 20, 285 |
| Conread position: | 278-679 |
| Cow position: | chr15:16112936-16112530 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 13 |
| Conread position: | 278-679 |
| Cow position: | chr15:19403515-19403109 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 185 |
| Conread position: | 278-679 |
| Cow position: | chr15:20458773-20459176 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 278-679 |
| Cow position: | chr15:22168592-22168186 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 285 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 278-679 |
| Cow position: | chr15:25208238-25208634 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 288 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 22, 47 |
| Conread position: | 278-679 |
| Cow position: | chr15:36392192-36391803 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 13, 53 |
| Conread position: | 278-679 |
| Cow position: | chr15:37716410-37716802 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 260 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 22, 60 |
| Conread position: | 278-679 |
| Cow position: | chr15:47842739-47843119 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 282 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 30, 52 |
| Conread position: | 278-679 |
| Cow position: | chr15:51632518-51632909 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 280 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 280-472 |
| Cow position: | chr15:10454380-10454181 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 18, 148 |
| Conread position: | 280-513 |
| Cow position: | chr15:7953760-7954013 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 18, 29 |
| Conread position: | 280-676 |
| Cow position: | chr15:33681189-33680784 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 293 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 23, 28 |
| Conread position: | 285-488 |
| Cow position: | chr15:8937842-8938050 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 15, 58 |
| Conread position: | 285-677 |
| Cow position: | chr15:10336269-10335887 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 16, 95 |
| Conread position: | 286-669 |
| Cow position: | chr15:9267535-9267914 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 247 |
| Conread position: | 299-679 |
| Cow position: | chr15:29792413-29792781 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 73, 128 |
| Conread position: | 303-679 |
| Cow position: | chr15:794510-794886 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 280 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 71, 39 |
| Conread position: | 303-679 |
| Cow position: | chr15:20352345-20351959 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 29 |
| Conread position: | 305-677 |
| Cow position: | chr15:6530337-6530717 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 67, 27 |
| Conread position: | 306-676 |
| Cow position: | chr15:23265052-23265407 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 144 |
| Conread position: | 306-679 |
| Cow position: | chr15:9870915-9871285 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 68, 23 |
| Conread position: | 306-679 |
| Cow position: | chr15:20369966-20370329 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 68, 112 |
| Conread position: | 312-534 |
| Cow position: | chr15:10607560-10607785 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 62, 13 |
| Conread position: | 323-679 |
| Cow position: | chr15:21388682-21389040 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 256 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 51, 122 |
| Conread position: | 332-676 |
| Cow position: | chr15:34104744-34104402 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 42, 10 |
| Conread position: | 350-677 |
| Cow position: | chr15:20390828-20391144 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 133 |
| Conread position: | 381-679 |
| Cow position: | chr15:13387504-13387208 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 218 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 6, 85 |
| Conread position: | 386-532 |
| Cow position: | chr15:12199609-12199756 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 386-532 |
| Cow position: | chr15:46611335-46611189 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 386-543 |
| Cow position: | chr15:16543047-16543205 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 386-674 |
| Cow position: | chr15:17233601-17233325 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 97, 31 |
| Conread position: | 386-677 |
| Cow position: | chr15:47990345-47990635 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 99, 159 |
| Conread position: | 388-533 |
| Cow position: | chr15:53353140-53353283 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 390-532 |
| Cow position: | chr15:42529027-42528885 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 132, 123 |
| Conread position: | 390-533 |
| Cow position: | chr15:42536411-42536268 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 132, 123 |
| Conread position: | 397-533 |
| Cow position: | chr15:5930983-5930845 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 398-679 |
| Cow position: | chr15:22938931-22939194 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 57, 78 |
| Conread position: | 403-679 |
| Cow position: | chr15:5571236-5571510 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 77, 142 |
| Conread position: | 422-546 |
| Cow position: | chr15:26404650-26404525 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 96 |
| Conread position: | 425-677 |
| Cow position: | chr15:16307794-16307544 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 56, 120 |
| Conread position: | 434-679 |
| Cow position: | chr15:11362809-11363049 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 20, 92 |
| Conread position: | 442-676 |
| Cow position: | chr15:4093564-4093801 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 100, 140 |
| Conread position: | 446-677 |
| Cow position: | chr15:1298093-1297868 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 446-679 |
| Cow position: | chr15:40343607-40343377 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 99 |
| Conread position: | 449-679 |
| Cow position: | chr15:27972861-27973089 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 86 |
| Conread position: | 449-679 |
| Cow position: | chr15:45323135-45322916 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 64, 8 |
| Conread position: | 451-679 |
| Cow position: | chr15:21894134-21893910 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 94 |
| Conread position: | 454-679 |
| Cow position: | chr15:21803308-21803532 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 120 |
| Conread position: | 456-679 |
| Cow position: | chr15:35642367-35642147 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 23, 93 |
| Conread position: | 457-677 |
| Cow position: | chr15:2669249-2669036 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 92, 101 |
| Conread position: | 457-679 |
| Cow position: | chr15:38883502-38883280 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 24, 82 |
| Conread position: | 539-679 |
| Cow position: | chr15:5632955-5632811 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 66, 38 |
Show alignments to all cow chromosomes.