Cow genome map


           Conread name:
           Ova1-OVRM10173D01
        

               Conread position:
               235-615
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               275
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               9, 27
               

               Conread position:
               249-679
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               295
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               50, 31
               

               Conread position:
               263-539
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               17, 35
               

               Conread position:
               267-677
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               300
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               33, 66
               

               Conread position:
               278-369
               

               Cow position:
               
               

               Alignm length:
               93
               

               Alignm identity:
               80
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               278-465
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               96, 23
               

               Conread position:
               278-471
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               91, 62
               

               Conread position:
               278-503
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               278-525
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               21, 250
               

               Conread position:
               278-530
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               278-532
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               22, 55
               

               Conread position:
               278-533
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               200
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               22, 149
               

               Conread position:
               278-533
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               22, 70
               

               Conread position:
               278-533
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               22, 46
               

               Conread position:
               278-533
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               22, 106
               

               Conread position:
               278-540
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               278-628
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               251
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               22, 271
               

               Conread position:
               278-672
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               276
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               21, 50
               

               Conread position:
               278-672
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 52
               

               Conread position:
               278-672
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               281
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               21, 52
               

               Conread position:
               278-677
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               283
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               21, 55
               

               Conread position:
               278-677
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               286
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               278-679
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               290
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               20, 285
               

               Conread position:
               278-679
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 13
               

               Conread position:
               278-679
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 185
               

               Conread position:
               278-679
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               278-679
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               285
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               278-679
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               288
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               22, 47
               

               Conread position:
               278-679
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               13, 53
               

               Conread position:
               278-679
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               260
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               22, 60
               

               Conread position:
               278-679
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               282
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               30, 52
               

               Conread position:
               278-679
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               280
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               280-472
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               18, 148
               

               Conread position:
               280-513
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 29
               

               Conread position:
               280-676
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               293
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               23, 28
               

               Conread position:
               285-488
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               15, 58
               

               Conread position:
               285-677
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               16, 95
               

               Conread position:
               286-669
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 247
               

               Conread position:
               299-679
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               73, 128
               

               Conread position:
               303-679
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               280
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               71, 39
               

               Conread position:
               303-679
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 29
               

               Conread position:
               305-677
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               272
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               67, 27
               

               Conread position:
               306-676
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               61, 144
               

               Conread position:
               306-679
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               68, 23
               

               Conread position:
               306-679
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               260
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               68, 112
               

               Conread position:
               312-534
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               62, 13
               

               Conread position:
               323-679
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               256
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               51, 122
               

               Conread position:
               332-676
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               42, 10
               

               Conread position:
               350-677
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               22, 133
               

               Conread position:
               381-679
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               218
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               6, 85
               

               Conread position:
               386-532
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               386-532
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               386-543
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               386-674
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               97, 31
               

               Conread position:
               386-677
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               99, 159
               

               Conread position:
               388-533
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               390-532
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               132, 123
               

               Conread position:
               390-533
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               132, 123
               

               Conread position:
               397-533
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               398-679
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               57, 78
               

               Conread position:
               403-679
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               77, 142
               

               Conread position:
               422-546
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               58, 96
               

               Conread position:
               425-677
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               56, 120
               

               Conread position:
               434-679
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               20, 92
               

               Conread position:
               442-676
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               100, 140
               

               Conread position:
               446-677
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               446-679
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               38, 99
               

               Conread position:
               449-679
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               31, 86
               

               Conread position:
               449-679
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               64, 8
               

               Conread position:
               451-679
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               30, 94
               

               Conread position:
               454-679
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               30, 120
               

               Conread position:
               456-679
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               23, 93
               

               Conread position:
               457-677
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               92, 101
               

               Conread position:
               457-679
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               24, 82
               

               Conread position:
               539-679
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               66, 38
               
Show alignments to all cow chromosomes.