Cow genome map

Conread name: Ova1-OVRM10173D01

Conread position: 250-677
Cow position: chr16:39384935-39385366 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 298
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 48, 24

Conread position: 256-533
Cow position: chr16:17288328-17288617 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 27, 75

Conread position: 276-679
Cow position: chr16:819820-820209 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 277
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 28, 106

Conread position: 278-446
Cow position: chr16:16057598-16057420 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 278-454
Cow position: chr16:53087030-53086846 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 147
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 22, 0

Conread position: 278-465
Cow position: chr16:50113250-50113446 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 47

Conread position: 278-479
Cow position: chr16:42752434-42752644 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 22, 160

Conread position: 278-509
Cow position: chr16:4981809-4981574 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 162

Conread position: 278-527
Cow position: chr16:20559691-20559952 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 139

Conread position: 278-532
Cow position: chr16:832021-831760 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 196
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 22, 248

Conread position: 278-532
Cow position: chr16:56783173-56783426 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 189
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 96, 21

Conread position: 278-533
Cow position: chr16:8439059-8438806 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 22, 111

Conread position: 278-533
Cow position: chr16:16177380-16177638 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 193
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 22, 52

Conread position: 278-533
Cow position: chr16:46552367-46552638 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 60

Conread position: 278-533
Cow position: chr16:48398683-48398426 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 22, 51

Conread position: 278-533
Cow position: chr16:51710560-51710308 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 46

Conread position: 278-614
Cow position: chr16:39394147-39394462 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 244
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 22, 46

Conread position: 278-614
Cow position: chr16:45173987-45173660 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 248
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 94, 46

Conread position: 278-672
Cow position: chr16:600503-600905 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 280
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 22, 53

Conread position: 278-673
Cow position: chr16:30311545-30311155 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 282
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 22, 58

Conread position: 278-675
Cow position: chr16:42079278-42078884 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 279
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 22, 55

Conread position: 278-675
Cow position: chr16:49126623-49126232 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 281
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 23, 55

Conread position: 278-676
Cow position: chr16:3288593-3288977 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 288
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 16, 56

Conread position: 278-676
Cow position: chr16:4712463-4712859 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 46

Conread position: 278-676
Cow position: chr16:50418128-50417730 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 268
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 20, 107

Conread position: 278-677
Cow position: chr16:40333761-40333368 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 270
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 51

Conread position: 278-677
Cow position: chr16:50190028-50189631 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 290
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 22, 52

Conread position: 278-678
Cow position: chr16:14758276-14758693 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 285
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 96, 51

Conread position: 278-679
Cow position: chr16:237806-238226 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 288
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 52

Conread position: 278-679
Cow position: chr16:5416198-5415797 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 285
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 22, 65

Conread position: 278-679
Cow position: chr16:7498630-7499021 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 265
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 20, 269

Conread position: 278-679
Cow position: chr16:7541858-7542247 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 272
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 99

Conread position: 278-679
Cow position: chr16:14029063-14028667 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 288
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 23, 232

Conread position: 278-679
Cow position: chr16:16402774-16402360 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 276

Conread position: 278-679
Cow position: chr16:17142491-17142899 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 202

Conread position: 278-679
Cow position: chr16:18141764-18141368 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 292
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 22, 51

Conread position: 278-679
Cow position: chr16:18354385-18353996 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 286
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 22, 82

Conread position: 278-679
Cow position: chr16:35187809-35188215 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 84

Conread position: 278-679
Cow position: chr16:42242569-42242155 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 244

Conread position: 278-679
Cow position: chr16:46223421-46222993 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 287
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 22, 50

Conread position: 278-679
Cow position: chr16:51400186-51399785 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 292
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 21, 52

Conread position: 279-536
Cow position: chr16:11100233-11099974 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 21, 208

Conread position: 279-677
Cow position: chr16:39474576-39474189 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 278
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 21, 59

Conread position: 279-679
Cow position: chr16:16096301-16096697 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 279
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 21, 145

Conread position: 280-533
Cow position: chr16:12472679-12472424 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 20, 27

Conread position: 280-679
Cow position: chr16:26500726-26501117 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 56

Conread position: 281-676
Cow position: chr16:4910969-4910569 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 287
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 18, 49

Conread position: 281-677
Cow position: chr16:53509425-53509024 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 278
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 18, 43

Conread position: 282-676
Cow position: chr16:23990926-23990525 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 275
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 18, 36

Conread position: 283-677
Cow position: chr16:6379542-6379149 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 269
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 47

Conread position: 285-679
Cow position: chr16:2223837-2223441 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 271
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 16, 43

Conread position: 286-533
Cow position: chr16:50516338-50516077 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 195
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 18, 45

Conread position: 291-677
Cow position: chr16:16425032-16424645 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 268
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 9, 42

Conread position: 303-677
Cow position: chr16:49141972-49141606 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 263
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 69, 29

Conread position: 305-533
Cow position: chr16:54578760-54578987 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 67, 27

Conread position: 306-530
Cow position: chr16:44676480-44676704 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 66, 17

Conread position: 308-676
Cow position: chr16:31159987-31159614 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 278
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 23, 29

Conread position: 319-479
Cow position: chr16:15905455-15905286 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 107

Conread position: 334-679
Cow position: chr16:25965120-25965463 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 235
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 114

Conread position: 334-679
Cow position: chr16:30143603-30143244 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 237
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 40, 277

Conread position: 335-628
Cow position: chr16:51578799-51578517 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 39, 74

Conread position: 335-677
Cow position: chr16:25170005-25170352 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 247
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 37, 91

Conread position: 343-678
Cow position: chr16:24825687-24826031 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 249
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 31, 203

Conread position: 350-677
Cow position: chr16:32132161-32132484 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 228
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 66

Conread position: 385-679
Cow position: chr16:4144731-4145025 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 204
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 59, 105

Conread position: 385-679
Cow position: chr16:47510303-47510015 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 56, 143

Conread position: 386-618
Cow position: chr16:30715164-30715386 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 93, 136

Conread position: 386-672
Cow position: chr16:4626722-4626439 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 187, 158

Conread position: 386-672
Cow position: chr16:21450526-21450800 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 93, 52

Conread position: 386-679
Cow position: chr16:8448990-8448687 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 218
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 93, 195

Conread position: 386-679
Cow position: chr16:11775375-11775088 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 100, 8

Conread position: 386-679
Cow position: chr16:13791177-13791476 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 219
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 61, 160

Conread position: 386-679
Cow position: chr16:43804171-43804452 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 213
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 98, 60

Conread position: 387-533
Cow position: chr16:48956479-48956617 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 387-618
Cow position: chr16:54228056-54227834 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 151

Conread position: 387-678
Cow position: chr16:15808645-15808934 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 197
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 72

Conread position: 388-676
Cow position: chr16:7083059-7082776 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 192
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 91, 157

Conread position: 391-676
Cow position: chr16:18496488-18496205 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 201
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 88, 42

Conread position: 396-677
Cow position: chr16:1549192-1548916 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 196, 79

Conread position: 403-679
Cow position: chr16:37379959-37380229 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 188
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 67, 36

Conread position: 407-676
Cow position: chr16:51869332-51869598 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 72, 16

Conread position: 409-676
Cow position: chr16:14360802-14361064 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 5

Conread position: 421-666
Cow position: chr16:29379962-29380204 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 5

Conread position: 431-676
Cow position: chr16:34168312-34168555 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 48, 114

Conread position: 431-677
Cow position: chr16:47820288-47820525 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 53, 104

Conread position: 433-679
Cow position: chr16:15960575-15960331 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 172, 101

Conread position: 440-679
Cow position: chr16:25287964-25287727 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 139, 109

Conread position: 446-672
Cow position: chr16:47662445-47662667 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 99

Conread position: 446-677
Cow position: chr16:5363621-5363854 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 126

Conread position: 449-663
Cow position: chr16:25484103-25484309 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 65, 72

Conread position: 449-679
Cow position: chr16:4372761-4372534 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 74

Conread position: 449-679
Cow position: chr16:53613034-53613264 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 65, 72

Conread position: 456-679
Cow position: chr16:20025186-20025407 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 28, 127

Conread position: 456-679
Cow position: chr16:48385659-48385440 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 65

Conread position: 457-679
Cow position: chr16:22008888-22009120 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 109

Show alignments to all cow chromosomes.