Cow genome map

Conread name: Ova1-OVRM10173D01

Conread position: 263-517
Cow position: chr18:17757389-17757126 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 111, 14

Conread position: 275-674
Cow position: chr18:55552492-55552895 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 10

Conread position: 276-678
Cow position: chr18:6290306-6290713 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 284
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 24, 9

Conread position: 278-417
Cow position: chr18:6610296-6610155 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 278-489
Cow position: chr18:24635548-24635772 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 278-494
Cow position: chr18:9900425-9900631 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 26, 71

Conread position: 278-512
Cow position: chr18:29768436-29768680 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 0

Conread position: 278-531
Cow position: chr18:23659031-23658773 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 200
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 22, 52

Conread position: 278-533
Cow position: chr18:7076298-7076551 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 22, 55

Conread position: 278-533
Cow position: chr18:8967532-8967786 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 22, 144

Conread position: 278-533
Cow position: chr18:9974797-9974538 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 196
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 22, 55

Conread position: 278-543
Cow position: chr18:48451202-48451467 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 26, 69

Conread position: 278-573
Cow position: chr18:23137688-23137386 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 218
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 22, 149

Conread position: 278-617
Cow position: chr18:22790539-22790215 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 22, 46

Conread position: 278-641
Cow position: chr18:81291-81647 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 247
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 22, 55

Conread position: 278-641
Cow position: chr18:6878099-6877737 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 258
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 21, 52

Conread position: 278-659
Cow position: chr18:11866877-11867248 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 271
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 22, 98

Conread position: 278-663
Cow position: chr18:51500561-51500162 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 271
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 150

Conread position: 278-672
Cow position: chr18:28658380-28657988 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 263
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 52

Conread position: 278-673
Cow position: chr18:2609189-2608812 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 283
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 22, 52

Conread position: 278-673
Cow position: chr18:31672979-31672590 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 267
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 22, 128

Conread position: 278-676
Cow position: chr18:7964759-7965154 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 283
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 55

Conread position: 278-676
Cow position: chr18:35636819-35636423 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 52

Conread position: 278-676
Cow position: chr18:39002273-39001877 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 256

Conread position: 278-677
Cow position: chr18:7649520-7649923 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 267
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 107

Conread position: 278-677
Cow position: chr18:37024028-37023627 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 52

Conread position: 278-678
Cow position: chr18:7955675-7956070 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 273
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 26, 52

Conread position: 278-679
Cow position: chr18:2270975-2270577 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 52

Conread position: 278-679
Cow position: chr18:4315833-4316238 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 288
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 96, 21

Conread position: 278-679
Cow position: chr18:14815813-14815415 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 268

Conread position: 278-679
Cow position: chr18:24021919-24022304 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 266
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 50

Conread position: 278-679
Cow position: chr18:33606159-33606559 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 284
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 22, 50

Conread position: 278-679
Cow position: chr18:35057875-35058267 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 274
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 23, 63

Conread position: 278-679
Cow position: chr18:36458456-36458861 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 257

Conread position: 278-679
Cow position: chr18:42966366-42966792 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 292
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 21, 231

Conread position: 278-679
Cow position: chr18:45104899-45104517 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 55

Conread position: 278-679
Cow position: chr18:47183756-47183355 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 276
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 22, 29

Conread position: 278-679
Cow position: chr18:49543018-49543402 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 267
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 52

Conread position: 278-679
Cow position: chr18:49655239-49655628 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 276
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 55

Conread position: 278-679
Cow position: chr18:51406363-51405978 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 278
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 30

Conread position: 278-679
Cow position: chr18:52635553-52635151 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 272
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 22, 225

Conread position: 279-521
Cow position: chr18:13877206-13876953 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 279-533
Cow position: chr18:3416704-3416959 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 95, 37

Conread position: 279-667
Cow position: chr18:3179949-3180336 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 284
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 51

Conread position: 279-677
Cow position: chr18:29058952-29058568 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 270
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 48

Conread position: 280-663
Cow position: chr18:49161926-49161531 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 277
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 20, 50

Conread position: 280-679
Cow position: chr18:11376895-11377292 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 294
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 19, 46

Conread position: 281-678
Cow position: chr18:16045468-16045075 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 259
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 15, 66

Conread position: 281-679
Cow position: chr18:13508212-13507811 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 290
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 18, 179

Conread position: 282-679
Cow position: chr18:56151122-56150722 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 255
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 17, 108

Conread position: 286-533
Cow position: chr18:51679337-51679085 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 14, 44

Conread position: 286-678
Cow position: chr18:51691932-51691537 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 283
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 44

Conread position: 286-678
Cow position: chr18:51713173-51712774 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 278
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 13, 38

Conread position: 287-676
Cow position: chr18:22121343-22120956 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 290
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 9, 43

Conread position: 290-677
Cow position: chr18:38686642-38687015 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 261
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 8, 40

Conread position: 299-533
Cow position: chr18:30360573-30360332 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 30, 41

Conread position: 302-679
Cow position: chr18:29357084-29356699 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 264
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 27

Conread position: 303-679
Cow position: chr18:40758766-40759134 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 26

Conread position: 306-532
Cow position: chr18:48818700-48818461 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 66, 229

Conread position: 307-679
Cow position: chr18:17004812-17005185 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 266
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 69, 22

Conread position: 334-678
Cow position: chr18:47314719-47314362 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 244
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 40, 224

Conread position: 334-679
Cow position: chr18:35075967-35076313 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 243
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 34, 15

Conread position: 335-532
Cow position: chr18:18820075-18819879 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 163
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 37, 14

Conread position: 335-533
Cow position: chr18:30248548-30248340 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 160

Conread position: 336-679
Cow position: chr18:19159382-19159044 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 254
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 74

Conread position: 350-679
Cow position: chr18:36445025-36445367 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 24, 197

Conread position: 386-532
Cow position: chr18:10861775-10861631 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 99, 8

Conread position: 386-533
Cow position: chr18:21751943-21752091 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 73, 99

Conread position: 386-619
Cow position: chr18:29264811-29264594 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 219, 97

Conread position: 386-656
Cow position: chr18:12270132-12270411 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 203
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 73, 174

Conread position: 386-672
Cow position: chr18:4624789-4624510 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 193
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 190, 162

Conread position: 386-674
Cow position: chr18:23447438-23447158 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 192
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 63, 38

Conread position: 386-676
Cow position: chr18:14586836-14586540 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 199
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 98, 110

Conread position: 386-677
Cow position: chr18:55505044-55505333 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 201
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 127, 48

Conread position: 386-679
Cow position: chr18:3098672-3098390 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 224, 85

Conread position: 386-679
Cow position: chr18:21195699-21195417 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 217
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 97, 150

Conread position: 392-677
Cow position: chr18:11183588-11183871 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 29, 25

Conread position: 393-677
Cow position: chr18:2774940-2774675 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 191
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 113, 90

Conread position: 394-677
Cow position: chr18:32121413-32121136 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 183
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 47, 78

Conread position: 410-679
Cow position: chr18:8105279-8105017 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 97

Conread position: 420-533
Cow position: chr18:11831812-11831926 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 420-535
Cow position: chr18:9365586-9365702 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 421-679
Cow position: chr18:19273424-19273174 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 187, 34

Conread position: 449-679
Cow position: chr18:23808170-23807945 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 103

Conread position: 449-679
Cow position: chr18:25282852-25282625 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 98

Conread position: 455-679
Cow position: chr18:54658010-54658238 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 69

Conread position: 456-674
Cow position: chr18:5646960-5647171 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 117, 28

Conread position: 456-674
Cow position: chr18:11680430-11680647 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 89

Show alignments to all cow chromosomes.