Cow genome map
| Conread name: | Ova1-OVRM10173D01 |
| Conread position: | 278-425 |
| Cow position: | chr19:7883819-7883977 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 278-454 |
| Cow position: | chr19:47187619-47187433 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 278-499 |
| Cow position: | chr19:14581154-14581358 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 22, 87 |
| Conread position: | 278-508 |
| Cow position: | chr19:12787923-12788163 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 180 |
| Conread position: | 278-532 |
| Cow position: | chr19:19500003-19499748 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 22, 218 |
| Conread position: | 278-533 |
| Cow position: | chr19:9293807-9294078 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 278-533 |
| Cow position: | chr19:25168742-25168484 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 21, 51 |
| Conread position: | 278-533 |
| Cow position: | chr19:34282885-34283133 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 22, 60 |
| Conread position: | 278-533 |
| Cow position: | chr19:39623240-39622977 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 168 |
| Conread position: | 278-533 |
| Cow position: | chr19:44144360-44144100 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 22, 65 |
| Conread position: | 278-619 |
| Cow position: | chr19:14572916-14573257 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 23 |
| Conread position: | 278-674 |
| Cow position: | chr19:32457192-32457588 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 146 |
| Conread position: | 278-676 |
| Cow position: | chr19:8375750-8375359 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 281 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 22, 48 |
| Conread position: | 278-676 |
| Cow position: | chr19:11171673-11171272 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 274 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 21, 82 |
| Conread position: | 278-677 |
| Cow position: | chr19:34620470-34620083 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 267 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 20, 49 |
| Conread position: | 278-677 |
| Cow position: | chr19:34956147-34955746 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 277 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 22, 46 |
| Conread position: | 278-679 |
| Cow position: | chr19:5656560-5656166 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 50 |
| Conread position: | 278-679 |
| Cow position: | chr19:9582855-9583245 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 297 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 22, 65 |
| Conread position: | 278-679 |
| Cow position: | chr19:14592621-14593003 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 290 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 22, 51 |
| Conread position: | 278-679 |
| Cow position: | chr19:29627823-29627430 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 285 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 22, 139 |
| Conread position: | 278-679 |
| Cow position: | chr19:31825482-31825063 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 291 |
| Conread position: | 278-679 |
| Cow position: | chr19:33932594-33932199 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 65 |
| Conread position: | 278-679 |
| Cow position: | chr19:37647290-37646888 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 278-679 |
| Cow position: | chr19:46821994-46822408 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 291 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 22, 50 |
| Conread position: | 279-679 |
| Cow position: | chr19:46918385-46918799 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 58 |
| Conread position: | 280-533 |
| Cow position: | chr19:35018694-35018438 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 21, 53 |
| Conread position: | 280-674 |
| Cow position: | chr19:6079834-6079415 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 294 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 20, 146 |
| Conread position: | 280-677 |
| Cow position: | chr19:20671353-20670948 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 287 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 18, 53 |
| Conread position: | 280-677 |
| Cow position: | chr19:23785742-23786140 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 33 |
| Conread position: | 280-679 |
| Cow position: | chr19:43440720-43441115 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 265 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 18, 92 |
| Conread position: | 281-530 |
| Cow position: | chr19:44839338-44839092 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 93, 47 |
| Conread position: | 281-677 |
| Cow position: | chr19:8496748-8496349 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 263 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 27, 43 |
| Conread position: | 282-679 |
| Cow position: | chr19:23222197-23222585 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 279 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 18, 48 |
| Conread position: | 282-679 |
| Cow position: | chr19:46181254-46180867 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 18, 48 |
| Conread position: | 283-482 |
| Cow position: | chr19:34911209-34911411 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 17, 30 |
| Conread position: | 283-533 |
| Cow position: | chr19:13211446-13211694 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 199 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 15, 206 |
| Conread position: | 286-533 |
| Cow position: | chr19:44571690-44571935 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 14, 47 |
| Conread position: | 289-677 |
| Cow position: | chr19:21198686-21199084 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 277 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 11, 261 |
| Conread position: | 296-513 |
| Cow position: | chr19:9093447-9093219 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 76, 53 |
| Conread position: | 299-532 |
| Cow position: | chr19:36176311-36176553 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 71, 36 |
| Conread position: | 303-618 |
| Cow position: | chr19:22765193-22765500 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 237 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 69, 29 |
| Conread position: | 303-679 |
| Cow position: | chr19:48409086-48409460 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 179 |
| Conread position: | 306-512 |
| Cow position: | chr19:15711618-15711836 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 66, 106 |
| Conread position: | 307-676 |
| Cow position: | chr19:27347074-27346704 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 67, 121 |
| Conread position: | 307-677 |
| Cow position: | chr19:51401431-51401065 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 65, 36 |
| Conread position: | 308-533 |
| Cow position: | chr19:56382729-56382956 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 64, 21 |
| Conread position: | 309-679 |
| Cow position: | chr19:27104331-27104686 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 268 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 66, 60 |
| Conread position: | 312-677 |
| Cow position: | chr19:53543294-53542943 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 60, 101 |
| Conread position: | 317-512 |
| Cow position: | chr19:31826685-31826897 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 319-679 |
| Cow position: | chr19:14929088-14928706 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 236 |
| Conread position: | 324-679 |
| Cow position: | chr19:42205522-42205882 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 50, 10 |
| Conread position: | 334-533 |
| Cow position: | chr19:39077928-39078137 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 334-679 |
| Cow position: | chr19:6688405-6688048 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 40, 275 |
| Conread position: | 335-533 |
| Cow position: | chr19:25999237-25999441 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 37, 112 |
| Conread position: | 335-676 |
| Cow position: | chr19:35539907-35540243 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 34, 109 |
| Conread position: | 337-533 |
| Cow position: | chr19:23393573-23393778 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 37, 193 |
| Conread position: | 338-533 |
| Cow position: | chr19:16096950-16096743 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 386-532 |
| Cow position: | chr19:21587601-21587749 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 386-616 |
| Cow position: | chr19:37633691-37633471 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 97, 149 |
| Conread position: | 386-669 |
| Cow position: | chr19:23005704-23005421 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 209 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 93, 159 |
| Conread position: | 386-672 |
| Cow position: | chr19:38340310-38340037 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 386-676 |
| Cow position: | chr19:31378954-31378654 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 62, 157 |
| Conread position: | 386-678 |
| Cow position: | chr19:6515922-6516215 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 135 |
| Conread position: | 386-679 |
| Cow position: | chr19:8212181-8211886 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 30, 164 |
| Conread position: | 386-679 |
| Cow position: | chr19:14347637-14347962 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 386-679 |
| Cow position: | chr19:31594960-31595249 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 211 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 35, 31 |
| Conread position: | 388-532 |
| Cow position: | chr19:21114970-21115115 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 388-679 |
| Cow position: | chr19:38596279-38596569 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 91, 18 |
| Conread position: | 393-679 |
| Cow position: | chr19:17274048-17273780 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 88, 47 |
| Conread position: | 395-679 |
| Cow position: | chr19:15437779-15438049 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 84, 140 |
| Conread position: | 401-672 |
| Cow position: | chr19:33912956-33912684 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 78, 18 |
| Conread position: | 402-675 |
| Cow position: | chr19:39751162-39751424 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 77, 47 |
| Conread position: | 420-674 |
| Cow position: | chr19:18750386-18750129 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 126 |
| Conread position: | 420-679 |
| Cow position: | chr19:16694350-16694093 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 159, 28 |
| Conread position: | 422-677 |
| Cow position: | chr19:35741854-35742108 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 62, 122 |
| Conread position: | 423-679 |
| Cow position: | chr19:20693197-20693446 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 150, 61 |
| Conread position: | 431-678 |
| Cow position: | chr19:41187507-41187753 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 81, 53 |
| Conread position: | 431-679 |
| Cow position: | chr19:47118790-47118546 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 142, 24 |
| Conread position: | 471-672 |
| Cow position: | chr19:9209248-9209456 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 8, 74 |
| Conread position: | 539-679 |
| Cow position: | chr19:4329252-4329100 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
Show alignments to all cow chromosomes.