Cow genome map

Conread name: Ova1-OVRM10173D01

Conread position: 278-425
Cow position: chr19:7883819-7883977 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 278-454
Cow position: chr19:47187619-47187433 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 278-499
Cow position: chr19:14581154-14581358 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 22, 87

Conread position: 278-508
Cow position: chr19:12787923-12788163 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 180

Conread position: 278-532
Cow position: chr19:19500003-19499748 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 22, 218

Conread position: 278-533
Cow position: chr19:9293807-9294078 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 196
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 0

Conread position: 278-533
Cow position: chr19:25168742-25168484 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 202
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 21, 51

Conread position: 278-533
Cow position: chr19:34282885-34283133 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 60

Conread position: 278-533
Cow position: chr19:39623240-39622977 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 168

Conread position: 278-533
Cow position: chr19:44144360-44144100 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 65

Conread position: 278-619
Cow position: chr19:14572916-14573257 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 23

Conread position: 278-674
Cow position: chr19:32457192-32457588 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 146

Conread position: 278-676
Cow position: chr19:8375750-8375359 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 281
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 48

Conread position: 278-676
Cow position: chr19:11171673-11171272 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 274
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 21, 82

Conread position: 278-677
Cow position: chr19:34620470-34620083 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 267
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 49

Conread position: 278-677
Cow position: chr19:34956147-34955746 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 277
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 22, 46

Conread position: 278-679
Cow position: chr19:5656560-5656166 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 50

Conread position: 278-679
Cow position: chr19:9582855-9583245 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 297
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 22, 65

Conread position: 278-679
Cow position: chr19:14592621-14593003 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 290
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 22, 51

Conread position: 278-679
Cow position: chr19:29627823-29627430 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 285
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 22, 139

Conread position: 278-679
Cow position: chr19:31825482-31825063 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 291

Conread position: 278-679
Cow position: chr19:33932594-33932199 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 65

Conread position: 278-679
Cow position: chr19:37647290-37646888 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 10

Conread position: 278-679
Cow position: chr19:46821994-46822408 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 291
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 22, 50

Conread position: 279-679
Cow position: chr19:46918385-46918799 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 58

Conread position: 280-533
Cow position: chr19:35018694-35018438 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 21, 53

Conread position: 280-674
Cow position: chr19:6079834-6079415 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 294
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 20, 146

Conread position: 280-677
Cow position: chr19:20671353-20670948 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 287
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 18, 53

Conread position: 280-677
Cow position: chr19:23785742-23786140 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 33

Conread position: 280-679
Cow position: chr19:43440720-43441115 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 265
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 18, 92

Conread position: 281-530
Cow position: chr19:44839338-44839092 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 183
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 93, 47

Conread position: 281-677
Cow position: chr19:8496748-8496349 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 263
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 27, 43

Conread position: 282-679
Cow position: chr19:23222197-23222585 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 279
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 18, 48

Conread position: 282-679
Cow position: chr19:46181254-46180867 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 276
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 48

Conread position: 283-482
Cow position: chr19:34911209-34911411 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 17, 30

Conread position: 283-533
Cow position: chr19:13211446-13211694 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 199
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 15, 206

Conread position: 286-533
Cow position: chr19:44571690-44571935 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 14, 47

Conread position: 289-677
Cow position: chr19:21198686-21199084 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 277
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 11, 261

Conread position: 296-513
Cow position: chr19:9093447-9093219 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 53

Conread position: 299-532
Cow position: chr19:36176311-36176553 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 71, 36

Conread position: 303-618
Cow position: chr19:22765193-22765500 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 237
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 69, 29

Conread position: 303-679
Cow position: chr19:48409086-48409460 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 179

Conread position: 306-512
Cow position: chr19:15711618-15711836 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 106

Conread position: 307-676
Cow position: chr19:27347074-27346704 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 254
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 67, 121

Conread position: 307-677
Cow position: chr19:51401431-51401065 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 271
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 65, 36

Conread position: 308-533
Cow position: chr19:56382729-56382956 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 64, 21

Conread position: 309-679
Cow position: chr19:27104331-27104686 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 268
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 66, 60

Conread position: 312-677
Cow position: chr19:53543294-53542943 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 249
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 60, 101

Conread position: 317-512
Cow position: chr19:31826685-31826897 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 319-679
Cow position: chr19:14929088-14928706 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 236

Conread position: 324-679
Cow position: chr19:42205522-42205882 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 247
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 10

Conread position: 334-533
Cow position: chr19:39077928-39078137 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 334-679
Cow position: chr19:6688405-6688048 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 240
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 40, 275

Conread position: 335-533
Cow position: chr19:25999237-25999441 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 112

Conread position: 335-676
Cow position: chr19:35539907-35540243 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 242
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 34, 109

Conread position: 337-533
Cow position: chr19:23393573-23393778 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 37, 193

Conread position: 338-533
Cow position: chr19:16096950-16096743 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 386-532
Cow position: chr19:21587601-21587749 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 386-616
Cow position: chr19:37633691-37633471 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 97, 149

Conread position: 386-669
Cow position: chr19:23005704-23005421 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 209
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 93, 159

Conread position: 386-672
Cow position: chr19:38340310-38340037 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 386-676
Cow position: chr19:31378954-31378654 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 218
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 62, 157

Conread position: 386-678
Cow position: chr19:6515922-6516215 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 135

Conread position: 386-679
Cow position: chr19:8212181-8211886 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 199
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 30, 164

Conread position: 386-679
Cow position: chr19:14347637-14347962 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 224
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 386-679
Cow position: chr19:31594960-31595249 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 35, 31

Conread position: 388-532
Cow position: chr19:21114970-21115115 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 94, 0

Conread position: 388-679
Cow position: chr19:38596279-38596569 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 206
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 91, 18

Conread position: 393-679
Cow position: chr19:17274048-17273780 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 88, 47

Conread position: 395-679
Cow position: chr19:15437779-15438049 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 84, 140

Conread position: 401-672
Cow position: chr19:33912956-33912684 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 78, 18

Conread position: 402-675
Cow position: chr19:39751162-39751424 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 198
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 77, 47

Conread position: 420-674
Cow position: chr19:18750386-18750129 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 172
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 126

Conread position: 420-679
Cow position: chr19:16694350-16694093 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 194
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 159, 28

Conread position: 422-677
Cow position: chr19:35741854-35742108 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 62, 122

Conread position: 423-679
Cow position: chr19:20693197-20693446 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 150, 61

Conread position: 431-678
Cow position: chr19:41187507-41187753 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 81, 53

Conread position: 431-679
Cow position: chr19:47118790-47118546 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 142, 24

Conread position: 471-672
Cow position: chr19:9209248-9209456 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 8, 74

Conread position: 539-679
Cow position: chr19:4329252-4329100 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 0

Show alignments to all cow chromosomes.