Cow genome map

Conread name: Ova1-OVRM10173D01

Conread position: 263-512
Cow position: chr20:19340482-19340226 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 200
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 35, 13

Conread position: 271-676
Cow position: chr20:19410769-19410364 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 275
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 29, 59

Conread position: 277-679
Cow position: chr20:16715006-16715399 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 274
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 23, 53

Conread position: 278-441
Cow position: chr20:34776735-34776905 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 278-443
Cow position: chr20:34107562-34107737 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 278-510
Cow position: chr20:39056430-39056179 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 76

Conread position: 278-513
Cow position: chr20:18490791-18491030 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 96, 182

Conread position: 278-532
Cow position: chr20:12155506-12155240 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 26, 231

Conread position: 278-532
Cow position: chr20:33363118-33363382 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 22, 39

Conread position: 278-533
Cow position: chr20:398686-398431 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 22, 40

Conread position: 278-533
Cow position: chr20:23849895-23850147 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 55

Conread position: 278-533
Cow position: chr20:32866741-32866483 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 39

Conread position: 278-534
Cow position: chr20:15821919-15822181 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 201
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 22, 166

Conread position: 278-534
Cow position: chr20:38935605-38935349 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 22, 48

Conread position: 278-608
Cow position: chr20:12839661-12839980 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 239
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 30, 52

Conread position: 278-615
Cow position: chr20:13789915-13790239 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 244
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 21, 54

Conread position: 278-617
Cow position: chr20:19352164-19351832 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 242
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 30, 185

Conread position: 278-618
Cow position: chr20:32846956-32847289 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 249
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 22, 55

Conread position: 278-619
Cow position: chr20:4781164-4781500 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 246
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 20, 96

Conread position: 278-654
Cow position: chr20:40423492-40423111 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 266
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 20, 41

Conread position: 278-656
Cow position: chr20:17831444-17831827 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 266
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 30, 71

Conread position: 278-658
Cow position: chr20:13269230-13269609 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 262
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 26, 51

Conread position: 278-676
Cow position: chr20:13821985-13821581 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 278
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 31, 225

Conread position: 278-676
Cow position: chr20:19146472-19146875 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 287
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 21, 13

Conread position: 278-677
Cow position: chr20:21019169-21019566 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 284
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 21, 51

Conread position: 278-677
Cow position: chr20:22446034-22445636 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 276
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 26, 19

Conread position: 278-677
Cow position: chr20:26076685-26077082 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 46

Conread position: 278-678
Cow position: chr20:9267524-9267105 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 195

Conread position: 278-679
Cow position: chr20:3599794-3599391 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 74

Conread position: 278-679
Cow position: chr20:3781829-3781423 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 289
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 22, 52

Conread position: 278-679
Cow position: chr20:6258459-6258059 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 290
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 23, 46

Conread position: 278-679
Cow position: chr20:9536740-9537140 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 278
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 21, 52

Conread position: 278-679
Cow position: chr20:26469475-26469060 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 281
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 20, 52

Conread position: 279-470
Cow position: chr20:7567978-7567773 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 78

Conread position: 279-470
Cow position: chr20:7592464-7592259 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 78

Conread position: 279-532
Cow position: chr20:36780131-36779869 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 143

Conread position: 279-675
Cow position: chr20:8429355-8429749 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 275
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 21, 51

Conread position: 280-533
Cow position: chr20:7710602-7710347 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 195
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 19, 50

Conread position: 280-533
Cow position: chr20:7757022-7756766 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 20, 53

Conread position: 280-676
Cow position: chr20:24391600-24391980 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 274
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 20, 67

Conread position: 280-677
Cow position: chr20:18185178-18185568 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 46

Conread position: 280-679
Cow position: chr20:4945640-4945245 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 50

Conread position: 280-679
Cow position: chr20:6423573-6423975 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 285
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 50

Conread position: 281-532
Cow position: chr20:3501899-3502156 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 49

Conread position: 281-532
Cow position: chr20:41977029-41977283 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 49

Conread position: 282-676
Cow position: chr20:7806955-7806557 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 287
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 17, 47

Conread position: 283-456
Cow position: chr20:9006984-9006801 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 283-679
Cow position: chr20:23679545-23679144 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 273

Conread position: 284-614
Cow position: chr20:35113140-35113464 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 246
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 13, 49

Conread position: 286-530
Cow position: chr20:34900430-34900680 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 141

Conread position: 286-679
Cow position: chr20:17845559-17845961 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 282
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 14, 100

Conread position: 287-512
Cow position: chr20:13817457-13817688 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 13, 134

Conread position: 297-676
Cow position: chr20:3034726-3035104 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 261
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 82, 32

Conread position: 299-533
Cow position: chr20:3659075-3658833 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 73, 145

Conread position: 302-677
Cow position: chr20:18321166-18320790 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 269
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 72, 30

Conread position: 303-533
Cow position: chr20:4335056-4334823 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 71, 37

Conread position: 303-533
Cow position: chr20:5702377-5702608 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 71, 43

Conread position: 303-674
Cow position: chr20:13877080-13876706 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 248
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 64, 223

Conread position: 303-679
Cow position: chr20:4621712-4621341 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 271
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 51, 26

Conread position: 303-679
Cow position: chr20:29844672-29845053 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 271
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 69, 24

Conread position: 306-512
Cow position: chr20:6045769-6045561 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 66, 169

Conread position: 306-646
Cow position: chr20:23164246-23163905 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 256
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 64, 244

Conread position: 316-679
Cow position: chr20:12334019-12334379 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 264
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 58, 97

Conread position: 329-678
Cow position: chr20:19750961-19751310 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 250
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 45, 95

Conread position: 334-676
Cow position: chr20:7132013-7132354 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 226
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 40, 47

Conread position: 334-679
Cow position: chr20:17903813-17904163 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 257
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 40, 89

Conread position: 334-679
Cow position: chr20:22959691-22959340 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 89

Conread position: 335-677
Cow position: chr20:28982357-28982700 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 241
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 37, 105

Conread position: 384-679
Cow position: chr20:35797319-35797612 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 208
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 158, 172

Conread position: 386-672
Cow position: chr20:10884651-10884362 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 206
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 35, 31

Conread position: 386-676
Cow position: chr20:19328117-19328402 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 197, 32

Conread position: 386-677
Cow position: chr20:18399476-18399765 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 196
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 187, 158

Conread position: 386-679
Cow position: chr20:6240814-6240518 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 218
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 93, 180

Conread position: 386-679
Cow position: chr20:15761232-15760944 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 93, 62

Conread position: 386-679
Cow position: chr20:33144838-33144549 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 73, 86

Conread position: 386-679
Cow position: chr20:33435447-33435163 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 213
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 126, 53

Conread position: 388-677
Cow position: chr20:12582231-12581955 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 15, 136

Conread position: 388-679
Cow position: chr20:13751963-13752237 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 217, 59

Conread position: 389-679
Cow position: chr20:21345120-21345431 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 49, 139

Conread position: 394-677
Cow position: chr20:15068871-15069142 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 91, 39

Conread position: 394-679
Cow position: chr20:22920437-22920165 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 86, 142

Conread position: 396-679
Cow position: chr20:21714477-21714759 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 84, 50

Conread position: 402-533
Cow position: chr20:26058337-26058207 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 111, 81

Conread position: 402-676
Cow position: chr20:35958380-35958646 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 171, 74

Conread position: 410-679
Cow position: chr20:13967520-13967256 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 30, 70

Conread position: 416-533
Cow position: chr20:22235058-22235178 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 41, 5

Conread position: 423-676
Cow position: chr20:24521503-24521750 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 61, 122

Conread position: 431-678
Cow position: chr20:20312977-20312744 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 53, 118

Conread position: 434-676
Cow position: chr20:21016243-21016489 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 171
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 139, 38

Conread position: 438-677
Cow position: chr20:3331527-3331286 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 112

Conread position: 449-679
Cow position: chr20:22704066-22704295 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 32, 161

Conread position: 450-679
Cow position: chr20:11741524-11741297 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 71

Conread position: 456-677
Cow position: chr20:12420836-12420618 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 29, 79

Conread position: 456-679
Cow position: chr20:14735462-14735679 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 147, 88

Conread position: 457-678
Cow position: chr20:11482353-11482132 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 103

Show alignments to all cow chromosomes.