Cow genome map


           Conread name:
           Ova1-OVRM10173D01
        

               Conread position:
               233-664
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               291
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               246, 35
               

               Conread position:
               236-672
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               299
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               64, 22
               

               Conread position:
               277-677
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               23, 179
               

               Conread position:
               278-457
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               278-499
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 54
               

               Conread position:
               278-517
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               278-526
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 179
               

               Conread position:
               278-531
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               21, 51
               

               Conread position:
               278-532
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               22, 51
               

               Conread position:
               278-533
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               278-650
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               260
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               22, 54
               

               Conread position:
               278-673
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               278
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               21, 51
               

               Conread position:
               278-674
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               278
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               179, 21
               

               Conread position:
               278-676
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               271
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               23, 167
               

               Conread position:
               278-677
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               273
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               22, 160
               

               Conread position:
               278-677
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               282
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               94, 54
               

               Conread position:
               278-677
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               286
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               278-677
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               272
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               22, 315
               

               Conread position:
               278-678
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 88
               

               Conread position:
               278-679
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               280
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               278-679
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               283
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               23, 136
               

               Conread position:
               278-679
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               278
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               278-679
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               286
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               23, 51
               

               Conread position:
               278-679
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               294
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               278-679
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 27
               

               Conread position:
               278-679
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               272
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               22, 50
               

               Conread position:
               278-679
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               278-679
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 50
               

               Conread position:
               278-679
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               22, 169
               

               Conread position:
               279-677
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               21, 62
               

               Conread position:
               280-679
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               280-679
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 266
               

               Conread position:
               281-529
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               17, 84
               

               Conread position:
               281-532
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               281-533
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               19, 43
               

               Conread position:
               282-679
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               18, 177
               

               Conread position:
               303-677
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               268
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               71, 32
               

               Conread position:
               303-679
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               262
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               71, 29
               

               Conread position:
               303-679
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               267
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               43, 234
               

               Conread position:
               304-663
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               66, 25
               

               Conread position:
               307-677
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               44, 39
               

               Conread position:
               307-679
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               67, 143
               

               Conread position:
               310-527
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               64, 16
               

               Conread position:
               334-678
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               241
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               40, 112
               

               Conread position:
               376-533
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               382-679
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               5, 154
               

               Conread position:
               386-533
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               35, 31
               

               Conread position:
               386-533
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               68, 54
               

               Conread position:
               386-677
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               179, 85
               

               Conread position:
               386-678
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               98, 135
               

               Conread position:
               386-679
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               35, 31
               

               Conread position:
               386-679
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               93, 14
               

               Conread position:
               387-679
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               67, 162
               

               Conread position:
               392-532
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               87, 65
               

               Conread position:
               392-533
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               89, 54
               

               Conread position:
               392-674
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               30, 132
               

               Conread position:
               420-533
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               420-658
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               216, 48
               

               Conread position:
               420-672
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               429-533
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               451-679
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               33, 84
               

               Conread position:
               456-679
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               28, 62
               

               Conread position:
               457-679
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               85, 114
               

               Conread position:
               467-678
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               14, 75
               

               Conread position:
               541-679
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               19, 134
               
Show alignments to all cow chromosomes.