Cow genome map
| Conread name: | Ova1-OVRM10173D01 |
| Conread position: | 233-664 |
| Cow position: | chr23:5151513-5151928 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 246, 35 |
| Conread position: | 236-672 |
| Cow position: | chr23:3727877-3727440 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 299 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 64, 22 |
| Conread position: | 277-677 |
| Cow position: | chr23:533787-534188 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 23, 179 |
| Conread position: | 278-457 |
| Cow position: | chr23:9652959-9652770 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 278-499 |
| Cow position: | chr23:30656600-30656375 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 54 |
| Conread position: | 278-517 |
| Cow position: | chr23:497043-496791 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 278-526 |
| Cow position: | chr23:37191020-37190759 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 179 |
| Conread position: | 278-531 |
| Cow position: | chr23:7311434-7311692 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 21, 51 |
| Conread position: | 278-532 |
| Cow position: | chr23:1640373-1640632 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 22, 51 |
| Conread position: | 278-533 |
| Cow position: | chr23:1535884-1536149 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 278-650 |
| Cow position: | chr23:416727-417090 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 260 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 22, 54 |
| Conread position: | 278-673 |
| Cow position: | chr23:10554449-10554052 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 278 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 21, 51 |
| Conread position: | 278-674 |
| Cow position: | chr23:1337728-1337343 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 278 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 179, 21 |
| Conread position: | 278-676 |
| Cow position: | chr23:10852617-10853011 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 271 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 23, 167 |
| Conread position: | 278-677 |
| Cow position: | chr23:3745169-3745569 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 273 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 22, 160 |
| Conread position: | 278-677 |
| Cow position: | chr23:7844852-7845253 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 282 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 94, 54 |
| Conread position: | 278-677 |
| Cow position: | chr23:13520020-13520411 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 286 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 278-677 |
| Cow position: | chr23:26986719-26986312 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 272 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 22, 315 |
| Conread position: | 278-678 |
| Cow position: | chr23:18367253-18367661 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 88 |
| Conread position: | 278-679 |
| Cow position: | chr23:344613-344212 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 280 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 278-679 |
| Cow position: | chr23:4608831-4608419 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 283 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 23, 136 |
| Conread position: | 278-679 |
| Cow position: | chr23:7596767-7596369 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 278-679 |
| Cow position: | chr23:9595267-9594868 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 286 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 23, 51 |
| Conread position: | 278-679 |
| Cow position: | chr23:11128795-11129193 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 294 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 278-679 |
| Cow position: | chr23:15710517-15710110 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 27 |
| Conread position: | 278-679 |
| Cow position: | chr23:18698465-18698060 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 22, 50 |
| Conread position: | 278-679 |
| Cow position: | chr23:22804291-22804688 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 278-679 |
| Cow position: | chr23:30663062-30662670 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 50 |
| Conread position: | 278-679 |
| Cow position: | chr23:40371042-40370611 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 22, 169 |
| Conread position: | 279-677 |
| Cow position: | chr23:34315405-34314997 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 21, 62 |
| Conread position: | 280-679 |
| Cow position: | chr23:1924274-1923874 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 27 |
| Conread position: | 280-679 |
| Cow position: | chr23:19002510-19002100 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 266 |
| Conread position: | 281-529 |
| Cow position: | chr23:6223585-6223818 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 17, 84 |
| Conread position: | 281-532 |
| Cow position: | chr23:39761933-39762187 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 17, 27 |
| Conread position: | 281-533 |
| Cow position: | chr23:9712678-9712935 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 19, 43 |
| Conread position: | 282-679 |
| Cow position: | chr23:26318985-26319380 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 18, 177 |
| Conread position: | 303-677 |
| Cow position: | chr23:18322831-18322455 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 71, 32 |
| Conread position: | 303-679 |
| Cow position: | chr23:21336902-21336524 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 262 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 71, 29 |
| Conread position: | 303-679 |
| Cow position: | chr23:32961795-32961403 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 267 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 43, 234 |
| Conread position: | 304-663 |
| Cow position: | chr23:5870598-5870233 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 66, 25 |
| Conread position: | 307-677 |
| Cow position: | chr23:361325-360955 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 44, 39 |
| Conread position: | 307-679 |
| Cow position: | chr23:25865093-25864731 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 67, 143 |
| Conread position: | 310-527 |
| Cow position: | chr23:4980933-4980728 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 64, 16 |
| Conread position: | 334-678 |
| Cow position: | chr23:14739066-14739405 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 241 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 40, 112 |
| Conread position: | 376-533 |
| Cow position: | chr23:36172209-36172370 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 382-679 |
| Cow position: | chr23:7402375-7402666 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 5, 154 |
| Conread position: | 386-533 |
| Cow position: | chr23:13945431-13945579 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 35, 31 |
| Conread position: | 386-533 |
| Cow position: | chr23:20435378-20435229 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 68, 54 |
| Conread position: | 386-677 |
| Cow position: | chr23:37992670-37992945 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 179, 85 |
| Conread position: | 386-678 |
| Cow position: | chr23:17796643-17796347 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 98, 135 |
| Conread position: | 386-679 |
| Cow position: | chr23:9734093-9734377 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 35, 31 |
| Conread position: | 386-679 |
| Cow position: | chr23:37065515-37065805 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 93, 14 |
| Conread position: | 387-679 |
| Cow position: | chr23:14164729-14164438 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 67, 162 |
| Conread position: | 392-532 |
| Cow position: | chr23:353898-353757 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 87, 65 |
| Conread position: | 392-533 |
| Cow position: | chr23:1922387-1922246 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 89, 54 |
| Conread position: | 392-674 |
| Cow position: | chr23:186849-187135 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 30, 132 |
| Conread position: | 420-533 |
| Cow position: | chr23:20605573-20605456 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 420-658 |
| Cow position: | chr23:2799276-2799503 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 216, 48 |
| Conread position: | 420-672 |
| Cow position: | chr23:14896094-14895855 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 429-533 |
| Cow position: | chr23:32917604-32917502 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 451-679 |
| Cow position: | chr23:26948929-26949162 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 456-679 |
| Cow position: | chr23:20057123-20056904 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 28, 62 |
| Conread position: | 457-679 |
| Cow position: | chr23:26632545-26632768 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 85, 114 |
| Conread position: | 467-678 |
| Cow position: | chr23:16700284-16700077 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 14, 75 |
| Conread position: | 541-679 |
| Cow position: | chr23:11845097-11845237 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 19, 134 |
Show alignments to all cow chromosomes.