Cow genome map

Conread name: Ova1-OVRM10173D01

Conread position: 277-676
Cow position: chr24:17412281-17412673 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 279
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 23, 92

Conread position: 278-443
Cow position: chr24:41063323-41063497 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 72

Conread position: 278-491
Cow position: chr24:16897309-16897087 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 173
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 30, 81

Conread position: 278-531
Cow position: chr24:27844984-27844726 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 22, 52

Conread position: 278-532
Cow position: chr24:45216579-45216316 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 52

Conread position: 278-533
Cow position: chr24:32070198-32070466 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 200
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 22, 166

Conread position: 278-613
Cow position: chr24:15666874-15666545 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 252
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 21, 52

Conread position: 278-618
Cow position: chr24:7001532-7001198 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 253
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 22, 52

Conread position: 278-672
Cow position: chr24:33621950-33621565 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 271
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 21, 261

Conread position: 278-674
Cow position: chr24:11006749-11007151 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 257
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 20, 273

Conread position: 278-675
Cow position: chr24:20024148-20024548 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 278
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 21, 94

Conread position: 278-676
Cow position: chr24:5141468-5141877 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 291
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 21, 52

Conread position: 278-676
Cow position: chr24:19466396-19465988 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 281
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 76, 50

Conread position: 278-676
Cow position: chr24:25677563-25677971 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 280
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 20, 46

Conread position: 278-676
Cow position: chr24:39441021-39440621 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 282
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 21, 52

Conread position: 278-677
Cow position: chr24:11876418-11876819 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 279
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 11, 21

Conread position: 278-677
Cow position: chr24:16557118-16556705 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 286
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 22, 55

Conread position: 278-677
Cow position: chr24:29679771-29679375 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 275
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 23, 87

Conread position: 278-677
Cow position: chr24:33230203-33230610 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 281
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 96, 49

Conread position: 278-679
Cow position: chr24:11118823-11119221 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 271
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 52

Conread position: 278-679
Cow position: chr24:27052955-27052558 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 279
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 22, 60

Conread position: 278-679
Cow position: chr24:30545349-30544923 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 288
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 22, 203

Conread position: 278-679
Cow position: chr24:32370381-32369982 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 278

Conread position: 280-453
Cow position: chr24:40184111-40184294 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 280-454
Cow position: chr24:18331223-18331406 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 69

Conread position: 280-665
Cow position: chr24:6149571-6149947 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 261
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 20, 68

Conread position: 280-674
Cow position: chr24:33239014-33238611 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 280
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 15, 69

Conread position: 280-677
Cow position: chr24:32205265-32204860 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 255

Conread position: 280-679
Cow position: chr24:11839718-11840125 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 271
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 19, 90

Conread position: 281-677
Cow position: chr24:28062486-28062885 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 289
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 18, 49

Conread position: 282-533
Cow position: chr24:15372659-15372917 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 18, 61

Conread position: 283-677
Cow position: chr24:17105022-17104638 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 276
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 26

Conread position: 285-679
Cow position: chr24:27148950-27149332 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 268
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 15, 45

Conread position: 286-676
Cow position: chr24:37386820-37386418 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 275
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 14, 172

Conread position: 287-679
Cow position: chr24:814717-814335 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 43

Conread position: 288-533
Cow position: chr24:28689263-28689506 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 20, 87

Conread position: 288-676
Cow position: chr24:27874152-27874535 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 264
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 13, 89

Conread position: 290-679
Cow position: chr24:16625949-16625552 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 277
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 84, 37

Conread position: 299-677
Cow position: chr24:15247067-15246712 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 259
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 70, 33

Conread position: 299-678
Cow position: chr24:33098935-33098550 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 269
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 70, 165

Conread position: 303-679
Cow position: chr24:40129675-40130063 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 255
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 64, 29

Conread position: 306-676
Cow position: chr24:5849848-5849462 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 270
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 66, 137

Conread position: 307-663
Cow position: chr24:38643196-38643551 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 250
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 67, 238

Conread position: 309-676
Cow position: chr24:15472920-15473294 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 253
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 60, 147

Conread position: 310-677
Cow position: chr24:32054234-32054594 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 235

Conread position: 311-676
Cow position: chr24:19658115-19658490 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 281
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 63, 36

Conread position: 335-677
Cow position: chr24:211569-211919 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 233
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 37, 274

Conread position: 335-679
Cow position: chr24:18485412-18485061 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 261
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 39, 211

Conread position: 335-679
Cow position: chr24:28721468-28721827 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 246
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 91

Conread position: 385-632
Cow position: chr24:6341816-6342053 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 99, 131

Conread position: 386-672
Cow position: chr24:25320640-25320925 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 93, 53

Conread position: 386-676
Cow position: chr24:6340665-6340945 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 95, 151

Conread position: 386-676
Cow position: chr24:21264858-21264575 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 220, 82

Conread position: 386-677
Cow position: chr24:20874328-20874614 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 214
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 98, 34

Conread position: 386-677
Cow position: chr24:20970144-20969865 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 35, 31

Conread position: 386-677
Cow position: chr24:33153436-33153710 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 96, 15

Conread position: 386-678
Cow position: chr24:27267286-27267569 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 206
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 98, 53

Conread position: 387-619
Cow position: chr24:34532772-34532995 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 148

Conread position: 387-675
Cow position: chr24:39492946-39493227 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 194
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 92, 46

Conread position: 388-677
Cow position: chr24:41985616-41985923 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 207
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 29

Conread position: 389-616
Cow position: chr24:39483127-39483341 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 95, 80

Conread position: 395-676
Cow position: chr24:38347336-38347618 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 84, 128

Conread position: 401-679
Cow position: chr24:35150184-35150458 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 192
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 30, 152

Conread position: 410-608
Cow position: chr24:40300828-40301015 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 74, 27

Conread position: 410-673
Cow position: chr24:29781835-29782094 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 184, 6

Conread position: 411-679
Cow position: chr24:34315032-34315290 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 165, 35

Conread position: 423-679
Cow position: chr24:42007431-42007676 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 127, 0

Conread position: 449-679
Cow position: chr24:29388961-29389177 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 38, 21

Show alignments to all cow chromosomes.