Cow genome map


           Conread name:
           Ova1-OVRM10173D01
        

               Conread position:
               277-676
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               279
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               23, 92
               

               Conread position:
               278-443
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 72
               

               Conread position:
               278-491
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               30, 81
               

               Conread position:
               278-531
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               278-532
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 52
               

               Conread position:
               278-533
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               200
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               22, 166
               

               Conread position:
               278-613
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               252
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               21, 52
               

               Conread position:
               278-618
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               253
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               278-672
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               271
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               21, 261
               

               Conread position:
               278-674
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               257
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               20, 273
               

               Conread position:
               278-675
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               278
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               21, 94
               

               Conread position:
               278-676
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               291
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               21, 52
               

               Conread position:
               278-676
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               76, 50
               

               Conread position:
               278-676
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               20, 46
               

               Conread position:
               278-676
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               282
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               21, 52
               

               Conread position:
               278-677
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               11, 21
               

               Conread position:
               278-677
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               286
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               22, 55
               

               Conread position:
               278-677
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               275
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               23, 87
               

               Conread position:
               278-677
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               281
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               96, 49
               

               Conread position:
               278-679
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               278-679
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               279
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               22, 60
               

               Conread position:
               278-679
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               288
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               22, 203
               

               Conread position:
               278-679
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 278
               

               Conread position:
               280-453
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               280-454
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               20, 69
               

               Conread position:
               280-665
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               20, 68
               

               Conread position:
               280-674
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               280
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               15, 69
               

               Conread position:
               280-677
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 255
               

               Conread position:
               280-679
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               271
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               19, 90
               

               Conread position:
               281-677
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               289
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               18, 49
               

               Conread position:
               282-533
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               18, 61
               

               Conread position:
               283-677
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               276
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               17, 26
               

               Conread position:
               285-679
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               268
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               15, 45
               

               Conread position:
               286-676
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               275
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               14, 172
               

               Conread position:
               287-679
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 43
               

               Conread position:
               288-533
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               20, 87
               

               Conread position:
               288-676
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               13, 89
               

               Conread position:
               290-679
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               277
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               84, 37
               

               Conread position:
               299-677
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               70, 33
               

               Conread position:
               299-678
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               269
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               70, 165
               

               Conread position:
               303-679
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               255
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               64, 29
               

               Conread position:
               306-676
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               66, 137
               

               Conread position:
               307-663
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               250
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               67, 238
               

               Conread position:
               309-676
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               60, 147
               

               Conread position:
               310-677
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 235
               

               Conread position:
               311-676
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               281
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               63, 36
               

               Conread position:
               335-677
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               37, 274
               

               Conread position:
               335-679
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               261
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               39, 211
               

               Conread position:
               335-679
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               41, 91
               

               Conread position:
               385-632
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               99, 131
               

               Conread position:
               386-672
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               93, 53
               

               Conread position:
               386-676
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               95, 151
               

               Conread position:
               386-676
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               220, 82
               

               Conread position:
               386-677
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               98, 34
               

               Conread position:
               386-677
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               35, 31
               

               Conread position:
               386-677
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               96, 15
               

               Conread position:
               386-678
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               98, 53
               

               Conread position:
               387-619
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               88, 148
               

               Conread position:
               387-675
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               92, 46
               

               Conread position:
               388-677
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               33, 29
               

               Conread position:
               389-616
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               95, 80
               

               Conread position:
               395-676
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               84, 128
               

               Conread position:
               401-679
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               30, 152
               

               Conread position:
               410-608
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               74, 27
               

               Conread position:
               410-673
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               184, 6
               

               Conread position:
               411-679
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               165, 35
               

               Conread position:
               423-679
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               449-679
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               38, 21
               
Show alignments to all cow chromosomes.