Cow genome map
| Conread name: | Ova1-OVRM10173D01 |
| Conread position: | 241-614 |
| Cow position: | chr25:20403199-20402832 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 90 |
| Conread position: | 265-679 |
| Cow position: | chr25:1735771-1735358 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 193 |
| Conread position: | 278-489 |
| Cow position: | chr25:16316346-16316566 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 22, 211 |
| Conread position: | 278-532 |
| Cow position: | chr25:9349706-9349440 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 199 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 278-532 |
| Cow position: | chr25:33255931-33256185 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 21, 55 |
| Conread position: | 278-533 |
| Cow position: | chr25:2110642-2110901 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 22, 55 |
| Conread position: | 278-533 |
| Cow position: | chr25:6226610-6226859 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 22, 50 |
| Conread position: | 278-533 |
| Cow position: | chr25:22730208-22730456 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 21, 49 |
| Conread position: | 278-538 |
| Cow position: | chr25:36962441-36962166 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 22, 263 |
| Conread position: | 278-628 |
| Cow position: | chr25:11956385-11956727 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 21, 60 |
| Conread position: | 278-636 |
| Cow position: | chr25:26238431-26238792 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 242 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 22, 108 |
| Conread position: | 278-641 |
| Cow position: | chr25:18490634-18490995 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 15, 52 |
| Conread position: | 278-674 |
| Cow position: | chr25:25754437-25754043 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 282 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 278-677 |
| Cow position: | chr25:33838946-33839336 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 280 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 21, 50 |
| Conread position: | 278-677 |
| Cow position: | chr25:35608168-35607764 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 50 |
| Conread position: | 278-679 |
| Cow position: | chr25:12204027-12204428 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 300 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 22, 54 |
| Conread position: | 278-679 |
| Cow position: | chr25:14225244-14224845 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 267 |
| Conread position: | 278-679 |
| Cow position: | chr25:14791316-14791712 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 293 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 278-679 |
| Cow position: | chr25:20394757-20395150 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 297 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 22, 203 |
| Conread position: | 278-679 |
| Cow position: | chr25:36779054-36779455 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 262 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 22, 230 |
| Conread position: | 278-679 |
| Cow position: | chr25:38135281-38135705 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 54 |
| Conread position: | 279-663 |
| Cow position: | chr25:8576252-8576634 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 21, 111 |
| Conread position: | 279-677 |
| Cow position: | chr25:2135924-2136310 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 21, 51 |
| Conread position: | 280-532 |
| Cow position: | chr25:32278469-32278212 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 21, 53 |
| Conread position: | 280-533 |
| Cow position: | chr25:36871419-36871677 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 21, 50 |
| Conread position: | 280-677 |
| Cow position: | chr25:3992350-3992739 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 20, 44 |
| Conread position: | 280-679 |
| Cow position: | chr25:26654468-26654868 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 63 |
| Conread position: | 282-679 |
| Cow position: | chr25:13569611-13569212 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 254 |
| Conread position: | 286-533 |
| Cow position: | chr25:11830329-11830078 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 14, 44 |
| Conread position: | 286-679 |
| Cow position: | chr25:25827027-25827427 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 13, 200 |
| Conread position: | 291-677 |
| Cow position: | chr25:7216393-7216786 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 267 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 9, 264 |
| Conread position: | 296-470 |
| Cow position: | chr25:2595560-2595743 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 296-677 |
| Cow position: | chr25:1837810-1838194 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 263 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 41, 155 |
| Conread position: | 305-678 |
| Cow position: | chr25:20076078-20076450 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 27, 121 |
| Conread position: | 306-532 |
| Cow position: | chr25:2414420-2414647 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 66, 28 |
| Conread position: | 306-650 |
| Cow position: | chr25:37469359-37469694 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 66, 184 |
| Conread position: | 334-572 |
| Cow position: | chr25:14255171-14255402 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 38, 51 |
| Conread position: | 334-677 |
| Cow position: | chr25:30319840-30319487 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 227 |
| Conread position: | 335-532 |
| Cow position: | chr25:13840506-13840302 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 41, 79 |
| Conread position: | 335-677 |
| Cow position: | chr25:21193333-21192978 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 250 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 39, 216 |
| Conread position: | 386-677 |
| Cow position: | chr25:40957316-40957031 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 198, 140 |
| Conread position: | 386-678 |
| Cow position: | chr25:10137777-10138048 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 99, 53 |
| Conread position: | 386-679 |
| Cow position: | chr25:21245936-21245645 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 158 |
| Conread position: | 387-679 |
| Cow position: | chr25:31733061-31732775 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 92, 18 |
| Conread position: | 388-533 |
| Cow position: | chr25:15273362-15273507 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 91, 108 |
| Conread position: | 388-534 |
| Cow position: | chr25:15694655-15694803 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 91, 135 |
| Conread position: | 388-629 |
| Cow position: | chr25:26938583-26938329 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 60, 32 |
| Conread position: | 388-676 |
| Cow position: | chr25:6464356-6464076 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 91, 29 |
| Conread position: | 391-679 |
| Cow position: | chr25:6424906-6424629 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 215, 34 |
| Conread position: | 392-532 |
| Cow position: | chr25:6683385-6683244 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 395-676 |
| Cow position: | chr25:12239458-12239192 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 178, 53 |
| Conread position: | 398-674 |
| Cow position: | chr25:9023327-9023587 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 87, 105 |
| Conread position: | 413-677 |
| Cow position: | chr25:14117806-14118049 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 71, 123 |
| Conread position: | 419-679 |
| Cow position: | chr25:6474397-6474138 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 41, 117 |
| Conread position: | 420-657 |
| Cow position: | chr25:448641-448408 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 65, 125 |
| Conread position: | 420-677 |
| Cow position: | chr25:8347213-8347465 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 64, 125 |
| Conread position: | 441-677 |
| Cow position: | chr25:36081600-36081833 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 104, 21 |
| Conread position: | 443-679 |
| Cow position: | chr25:14512843-14513070 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 71, 75 |
| Conread position: | 446-679 |
| Cow position: | chr25:14196585-14196818 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 104 |
| Conread position: | 446-679 |
| Cow position: | chr25:22203960-22203730 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 33, 99 |
| Conread position: | 450-679 |
| Cow position: | chr25:28188216-28187988 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 9, 96 |
| Conread position: | 456-679 |
| Cow position: | chr25:40321552-40321339 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 149, 78 |
Show alignments to all cow chromosomes.