Cow genome map
| Conread name: | Ova1-OVRM10173D01 |
| Conread position: | 249-533 |
| Cow position: | chr26:17181205-17180915 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 123, 80 |
| Conread position: | 275-512 |
| Cow position: | chr26:14906500-14906256 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 25, 154 |
| Conread position: | 276-673 |
| Cow position: | chr26:9082651-9082255 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 69, 83 |
| Conread position: | 278-365 |
| Cow position: | chr26:9088012-9088100 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 78 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 278-440 |
| Cow position: | chr26:22250316-22250144 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 278-451 |
| Cow position: | chr26:6487274-6487091 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 278-454 |
| Cow position: | chr26:14080027-14080213 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 18, 28 |
| Conread position: | 278-467 |
| Cow position: | chr26:20130505-20130307 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 22, 173 |
| Conread position: | 278-510 |
| Cow position: | chr26:24239518-24239757 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 22, 53 |
| Conread position: | 278-529 |
| Cow position: | chr26:16783383-16783654 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 23, 261 |
| Conread position: | 278-530 |
| Cow position: | chr26:33202464-33202225 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 278-533 |
| Cow position: | chr26:4599242-4598974 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 19, 57 |
| Conread position: | 278-533 |
| Cow position: | chr26:8820472-8820227 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 278-533 |
| Cow position: | chr26:9100174-9099915 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 23, 52 |
| Conread position: | 278-533 |
| Cow position: | chr26:11370508-11370771 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 75, 48 |
| Conread position: | 278-533 |
| Cow position: | chr26:20182333-20182597 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 22, 86 |
| Conread position: | 278-534 |
| Cow position: | chr26:18918506-18918233 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 278-544 |
| Cow position: | chr26:13706411-13706151 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 23, 54 |
| Conread position: | 278-670 |
| Cow position: | chr26:6714707-6714325 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 282 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 278-677 |
| Cow position: | chr26:3706383-3706770 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 285 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 20, 53 |
| Conread position: | 278-677 |
| Cow position: | chr26:14395658-14395267 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 288 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 19, 51 |
| Conread position: | 278-678 |
| Cow position: | chr26:8352536-8352938 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 278-679 |
| Cow position: | chr26:12238458-12238053 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 281 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 22, 71 |
| Conread position: | 278-679 |
| Cow position: | chr26:23600215-23599827 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 284 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 20, 46 |
| Conread position: | 278-679 |
| Cow position: | chr26:25393604-25394008 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 280-442 |
| Cow position: | chr26:21242422-21242594 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 280-677 |
| Cow position: | chr26:27930753-27930356 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 19, 50 |
| Conread position: | 280-679 |
| Cow position: | chr26:9604115-9604540 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 300 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 18, 67 |
| Conread position: | 282-501 |
| Cow position: | chr26:35102099-35102311 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 18, 67 |
| Conread position: | 283-679 |
| Cow position: | chr26:21351279-21351666 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 264 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 17, 106 |
| Conread position: | 303-533 |
| Cow position: | chr26:16720521-16720755 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 49, 23 |
| Conread position: | 303-679 |
| Cow position: | chr26:32776903-32776530 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 266 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 69, 26 |
| Conread position: | 307-492 |
| Cow position: | chr26:35448685-35448879 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 65, 122 |
| Conread position: | 307-505 |
| Cow position: | chr26:10966187-10965996 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 141, 67 |
| Conread position: | 312-679 |
| Cow position: | chr26:11135075-11134718 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 256 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 62, 78 |
| Conread position: | 330-678 |
| Cow position: | chr26:8700426-8700071 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 42, 224 |
| Conread position: | 381-679 |
| Cow position: | chr26:19459358-19459662 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 59 |
| Conread position: | 386-533 |
| Cow position: | chr26:10733095-10732953 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 386-677 |
| Cow position: | chr26:31889780-31890069 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 182, 58 |
| Conread position: | 392-536 |
| Cow position: | chr26:22180200-22180340 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 89, 20 |
| Conread position: | 393-676 |
| Cow position: | chr26:25737167-25737448 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 89, 158 |
| Conread position: | 394-679 |
| Cow position: | chr26:5246793-5246502 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 9, 130 |
| Conread position: | 395-675 |
| Cow position: | chr26:27491804-27491528 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 149, 65 |
| Conread position: | 402-674 |
| Cow position: | chr26:16167205-16166945 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 77, 32 |
| Conread position: | 420-677 |
| Cow position: | chr26:16549706-16549960 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 68, 19 |
| Conread position: | 422-679 |
| Cow position: | chr26:11263362-11263619 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 113 |
| Conread position: | 425-679 |
| Cow position: | chr26:1329272-1329521 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 17, 128 |
| Conread position: | 429-533 |
| Cow position: | chr26:34739509-34739614 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 445-677 |
| Cow position: | chr26:32898123-32897896 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 100 |
| Conread position: | 446-675 |
| Cow position: | chr26:9104532-9104308 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 33, 101 |
| Conread position: | 446-679 |
| Cow position: | chr26:23097429-23097206 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 13, 47 |
| Conread position: | 456-678 |
| Cow position: | chr26:3182190-3181969 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 81 |
| Conread position: | 458-668 |
| Cow position: | chr26:6793702-6793909 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 26, 64 |
| Conread position: | 472-676 |
| Cow position: | chr26:19774528-19774327 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 106, 72 |
Show alignments to all cow chromosomes.