Cow genome map


           Conread name:
           Ova1-OVRM10173D01
        

               Conread position:
               249-676
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               303
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               51, 12
               

               Conread position:
               253-533
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               44, 23
               

               Conread position:
               264-674
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               285
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               36, 66
               

               Conread position:
               277-532
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               28, 56
               

               Conread position:
               277-679
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               291
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               23, 171
               

               Conread position:
               278-446
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               278-447
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               278-533
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 250
               

               Conread position:
               278-533
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               18, 29
               

               Conread position:
               278-533
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               23, 52
               

               Conread position:
               278-537
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               22, 27
               

               Conread position:
               278-663
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               266
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               22, 40
               

               Conread position:
               278-672
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               293
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               278-672
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               19, 55
               

               Conread position:
               278-675
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               282
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               22, 29
               

               Conread position:
               278-676
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               287
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               23, 52
               

               Conread position:
               278-676
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               283
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               22, 48
               

               Conread position:
               278-677
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               22, 46
               

               Conread position:
               278-677
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               280
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               65, 32
               

               Conread position:
               278-677
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               272
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               22, 14
               

               Conread position:
               278-678
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               291
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               94, 50
               

               Conread position:
               278-678
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               296
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               20, 52
               

               Conread position:
               278-679
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 275
               

               Conread position:
               278-679
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               284
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               278-679
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               22, 98
               

               Conread position:
               279-530
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               93, 52
               

               Conread position:
               280-533
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               28, 63
               

               Conread position:
               280-666
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               254
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               20, 105
               

               Conread position:
               281-536
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               19, 48
               

               Conread position:
               282-676
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               18, 53
               

               Conread position:
               282-679
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               267
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               17, 137
               

               Conread position:
               283-677
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               266
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               17, 55
               

               Conread position:
               285-533
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               196
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               286-663
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               263
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               14, 41
               

               Conread position:
               287-508
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               13, 174
               

               Conread position:
               288-679
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               261
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               12, 45
               

               Conread position:
               297-625
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               77, 38
               

               Conread position:
               303-533
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               69, 29
               

               Conread position:
               306-676
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               69, 28
               

               Conread position:
               334-673
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               254
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               40, 197
               

               Conread position:
               335-532
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               37, 113
               

               Conread position:
               337-536
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               338-677
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               36, 179
               

               Conread position:
               344-532
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               373-679
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               110, 5
               

               Conread position:
               385-533
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               94, 23
               

               Conread position:
               386-532
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               98, 54
               

               Conread position:
               386-617
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               386-624
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               219, 148
               

               Conread position:
               386-677
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               386-679
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               211
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               98, 158
               

               Conread position:
               386-679
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               214
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               99, 124
               

               Conread position:
               387-679
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               17, 53
               

               Conread position:
               393-676
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               91, 152
               

               Conread position:
               398-677
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               51, 124
               

               Conread position:
               402-673
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 15
               

               Conread position:
               404-679
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               80, 131
               

               Conread position:
               414-679
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               420-533
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               420-533
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               420-656
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               150, 129
               

               Conread position:
               420-670
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               59, 125
               

               Conread position:
               421-678
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               157, 124
               

               Conread position:
               423-679
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               430-679
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               54, 107
               

               Conread position:
               431-678
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               143, 119
               

               Conread position:
               433-672
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               46, 104
               

               Conread position:
               433-676
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               81, 35
               

               Conread position:
               447-677
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               117, 103
               

               Conread position:
               541-679
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               81, 27
               
Show alignments to all cow chromosomes.