Cow genome map
| Conread name: | Ova1-OVRM10173D01 |
| Conread position: | 238-676 |
| Cow position: | chr5:28946519-28946079 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 309 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 31, 11 |
| Conread position: | 277-512 |
| Cow position: | chr5:55684710-55684952 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 87, 64 |
| Conread position: | 278-454 |
| Cow position: | chr5:45036365-45036547 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 22, 148 |
| Conread position: | 278-456 |
| Cow position: | chr5:29559917-29560105 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 278-505 |
| Cow position: | chr5:41334193-41334418 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 49 |
| Conread position: | 278-512 |
| Cow position: | chr5:7921802-7921554 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 20, 69 |
| Conread position: | 278-530 |
| Cow position: | chr5:12557822-12557565 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 20, 135 |
| Conread position: | 278-532 |
| Cow position: | chr5:20408072-20407822 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 22, 55 |
| Conread position: | 278-537 |
| Cow position: | chr5:33270062-33270322 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 22, 176 |
| Conread position: | 278-615 |
| Cow position: | chr5:54126669-54127022 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 278-618 |
| Cow position: | chr5:19969446-19969112 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 22, 55 |
| Conread position: | 278-628 |
| Cow position: | chr5:51151775-51151432 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 93, 47 |
| Conread position: | 278-638 |
| Cow position: | chr5:70771739-70772102 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 260 |
| Conread position: | 278-641 |
| Cow position: | chr5:57365487-57365137 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 23, 164 |
| Conread position: | 278-659 |
| Cow position: | chr5:39447948-39447570 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 280 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 22, 39 |
| Conread position: | 278-667 |
| Cow position: | chr5:45846105-45845720 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 284 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 20, 55 |
| Conread position: | 278-672 |
| Cow position: | chr5:33414819-33414430 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 21, 51 |
| Conread position: | 278-672 |
| Cow position: | chr5:47704549-47704147 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 48 |
| Conread position: | 278-673 |
| Cow position: | chr5:58004831-58005231 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 280 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 22, 50 |
| Conread position: | 278-676 |
| Cow position: | chr5:19470591-19470206 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 96, 21 |
| Conread position: | 278-676 |
| Cow position: | chr5:41604192-41604608 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 22, 71 |
| Conread position: | 278-676 |
| Cow position: | chr5:65776811-65776399 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 281 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 22, 72 |
| Conread position: | 278-676 |
| Cow position: | chr5:66815994-66815587 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 277 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 96, 45 |
| Conread position: | 278-677 |
| Cow position: | chr5:14314109-14314509 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 271 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 22, 130 |
| Conread position: | 278-677 |
| Cow position: | chr5:21828442-21828850 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 23, 55 |
| Conread position: | 278-677 |
| Cow position: | chr5:26094584-26094184 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 261 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 22, 262 |
| Conread position: | 278-677 |
| Cow position: | chr5:29903936-29903534 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 271 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 278-677 |
| Cow position: | chr5:34463998-34463600 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 274 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 23, 52 |
| Conread position: | 278-677 |
| Cow position: | chr5:47601397-47601803 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 281 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 22, 55 |
| Conread position: | 278-678 |
| Cow position: | chr5:12873333-12873729 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 22, 80 |
| Conread position: | 278-678 |
| Cow position: | chr5:29771104-29771501 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 21, 39 |
| Conread position: | 278-678 |
| Cow position: | chr5:43991871-43992307 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 296 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 278-678 |
| Cow position: | chr5:55068308-55068691 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 278-679 |
| Cow position: | chr5:4032425-4032006 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 287 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 22, 38 |
| Conread position: | 278-679 |
| Cow position: | chr5:6044872-6045277 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 273 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 22, 272 |
| Conread position: | 278-679 |
| Cow position: | chr5:6129942-6130339 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 26, 54 |
| Conread position: | 278-679 |
| Cow position: | chr5:9090419-9090035 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 22, 46 |
| Conread position: | 278-679 |
| Cow position: | chr5:16184678-16185073 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 52 |
| Conread position: | 278-679 |
| Cow position: | chr5:16894183-16893787 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 278-679 |
| Cow position: | chr5:29827639-29828035 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 286 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 26, 52 |
| Conread position: | 278-679 |
| Cow position: | chr5:34115228-34115636 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 303 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 22, 149 |
| Conread position: | 278-679 |
| Cow position: | chr5:35144929-35145335 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 281 |
| Conread position: | 278-679 |
| Cow position: | chr5:35207847-35208250 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 278-679 |
| Cow position: | chr5:44752733-44752331 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 252 |
| Conread position: | 278-679 |
| Cow position: | chr5:44848428-44848034 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 279 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 20, 63 |
| Conread position: | 278-679 |
| Cow position: | chr5:51999771-52000208 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 297 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 278-679 |
| Cow position: | chr5:55176472-55176876 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 187 |
| Conread position: | 278-679 |
| Cow position: | chr5:55756853-55756439 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 282 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 22, 48 |
| Conread position: | 278-679 |
| Cow position: | chr5:58855690-58856090 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 282 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 278-679 |
| Cow position: | chr5:64844531-64844142 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 278-679 |
| Cow position: | chr5:67932884-67932481 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 284 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 22, 263 |
| Conread position: | 279-455 |
| Cow position: | chr5:35967788-35967974 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 279-533 |
| Cow position: | chr5:12315904-12316160 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 20, 49 |
| Conread position: | 279-533 |
| Cow position: | chr5:32378456-32378714 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 21, 51 |
| Conread position: | 279-677 |
| Cow position: | chr5:6086978-6086574 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 22, 54 |
| Conread position: | 279-677 |
| Cow position: | chr5:62827167-62826770 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 51 |
| Conread position: | 279-677 |
| Cow position: | chr5:66257235-66257622 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 267 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 20, 96 |
| Conread position: | 279-679 |
| Cow position: | chr5:54405308-54404905 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 50 |
| Conread position: | 279-679 |
| Cow position: | chr5:61839775-61840178 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 65 |
| Conread position: | 280-537 |
| Cow position: | chr5:60447836-60448095 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 20, 41 |
| Conread position: | 280-672 |
| Cow position: | chr5:28330735-28330354 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 20, 10 |
| Conread position: | 280-676 |
| Cow position: | chr5:30302486-30302876 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 19, 50 |
| Conread position: | 280-678 |
| Cow position: | chr5:6528269-6528661 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 50 |
| Conread position: | 281-451 |
| Cow position: | chr5:57271848-57271668 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 67 |
| Conread position: | 281-533 |
| Cow position: | chr5:55942808-55942552 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 25, 52 |
| Conread position: | 281-676 |
| Cow position: | chr5:39094142-39094538 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 281 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 18, 50 |
| Conread position: | 281-679 |
| Cow position: | chr5:26378078-26377684 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 289 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 58 |
| Conread position: | 281-679 |
| Cow position: | chr5:65593462-65593860 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 293 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 19, 37 |
| Conread position: | 282-481 |
| Cow position: | chr5:57584607-57584824 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 283-459 |
| Cow position: | chr5:12563470-12563279 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 67 |
| Conread position: | 283-672 |
| Cow position: | chr5:21524756-21525150 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 15, 47 |
| Conread position: | 285-676 |
| Cow position: | chr5:50637428-50637809 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 295 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 15, 45 |
| Conread position: | 286-536 |
| Cow position: | chr5:34192546-34192794 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 12, 47 |
| Conread position: | 286-676 |
| Cow position: | chr5:29504693-29505092 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 14, 162 |
| Conread position: | 290-650 |
| Cow position: | chr5:15363491-15363845 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 8, 43 |
| Conread position: | 296-679 |
| Cow position: | chr5:16508697-16509082 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 31 |
| Conread position: | 297-679 |
| Cow position: | chr5:66972008-66972414 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 32 |
| Conread position: | 303-672 |
| Cow position: | chr5:50729111-50729473 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 69, 25 |
| Conread position: | 303-676 |
| Cow position: | chr5:44583502-44583145 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 270 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 303-679 |
| Cow position: | chr5:53855314-53855684 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 24 |
| Conread position: | 305-677 |
| Cow position: | chr5:72564373-72564746 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 264 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 69, 27 |
| Conread position: | 306-673 |
| Cow position: | chr5:9497970-9498348 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 115 |
| Conread position: | 310-678 |
| Cow position: | chr5:54310948-54311320 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 257 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 57, 21 |
| Conread position: | 317-454 |
| Cow position: | chr5:439613-439471 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 322-673 |
| Cow position: | chr5:34442169-34441811 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 254 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 7, 286 |
| Conread position: | 335-666 |
| Cow position: | chr5:35826239-35826576 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 237 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 39, 104 |
| Conread position: | 335-677 |
| Cow position: | chr5:21617103-21617440 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 39, 55 |
| Conread position: | 335-677 |
| Cow position: | chr5:57935473-57935125 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 39, 13 |
| Conread position: | 335-679 |
| Cow position: | chr5:44994407-44994056 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 37, 226 |
| Conread position: | 339-677 |
| Cow position: | chr5:58793972-58793625 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 15, 8 |
| Conread position: | 386-533 |
| Cow position: | chr5:20783325-20783470 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 73, 34 |
| Conread position: | 386-661 |
| Cow position: | chr5:34915839-34916107 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 17, 159 |
| Conread position: | 386-672 |
| Cow position: | chr5:47313171-47313455 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 94, 157 |
| Conread position: | 386-676 |
| Cow position: | chr5:65752557-65752840 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 98, 84 |
| Conread position: | 386-679 |
| Cow position: | chr5:5111379-5111089 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 35, 31 |
| Conread position: | 386-679 |
| Cow position: | chr5:42845902-42845611 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 93, 106 |
| Conread position: | 387-533 |
| Cow position: | chr5:44797016-44796873 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 387-534 |
| Cow position: | chr5:30950445-30950293 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 387-677 |
| Cow position: | chr5:34288768-34288487 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 95, 52 |
| Conread position: | 388-533 |
| Cow position: | chr5:19751558-19751698 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 96, 39 |
| Conread position: | 388-679 |
| Cow position: | chr5:28927897-28927603 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 216 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 60, 161 |
| Conread position: | 388-679 |
| Cow position: | chr5:45226129-45225838 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 212 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 66, 138 |
| Conread position: | 388-679 |
| Cow position: | chr5:72149951-72150233 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 91, 58 |
| Conread position: | 399-662 |
| Cow position: | chr5:63917696-63917441 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 180, 48 |
| Conread position: | 402-679 |
| Cow position: | chr5:50950267-50950540 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 81, 135 |
| Conread position: | 408-676 |
| Cow position: | chr5:4507241-4506971 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 71, 143 |
| Conread position: | 410-677 |
| Cow position: | chr5:57327510-57327781 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 410-678 |
| Cow position: | chr5:26990114-26990377 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 8, 140 |
| Conread position: | 421-533 |
| Cow position: | chr5:63992431-63992317 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 423-679 |
| Cow position: | chr5:3491936-3492181 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 56, 99 |
| Conread position: | 426-579 |
| Cow position: | chr5:12867111-12866957 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 58, 96 |
| Conread position: | 430-678 |
| Cow position: | chr5:65924959-65924706 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 98 |
| Conread position: | 432-679 |
| Cow position: | chr5:43474591-43474833 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 52, 103 |
| Conread position: | 438-679 |
| Cow position: | chr5:61600162-61600405 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 85 |
| Conread position: | 446-677 |
| Cow position: | chr5:58144848-58144617 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 23, 101 |
| Conread position: | 449-674 |
| Cow position: | chr5:32975790-32975570 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 63, 68 |
| Conread position: | 449-679 |
| Cow position: | chr5:12709648-12709874 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 118, 8 |
| Conread position: | 449-679 |
| Cow position: | chr5:43738187-43737968 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 449-679 |
| Cow position: | chr5:56433562-56433790 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 76, 35 |
| Conread position: | 456-676 |
| Cow position: | chr5:17063326-17063107 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 24, 85 |
| Conread position: | 456-679 |
| Cow position: | chr5:45036788-45037007 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 90 |
| Conread position: | 456-679 |
| Cow position: | chr5:54350593-54350377 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 28, 89 |
| Conread position: | 542-677 |
| Cow position: | chr5:57736949-57737088 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 63, 76 |
Show alignments to all cow chromosomes.