Cow genome map

Conread name: Ova1-OVRM10173D01

Conread position: 237-487
Cow position: chr9:10546781-10546528 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 45

Conread position: 249-679
Cow position: chr9:8534185-8534620 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 302
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 21, 12

Conread position: 264-512
Cow position: chr9:64453640-64453890 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 108, 19

Conread position: 278-532
Cow position: chr9:17740479-17740734 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 22, 55

Conread position: 278-533
Cow position: chr9:1846545-1846802 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 21, 52

Conread position: 278-533
Cow position: chr9:19743448-19743190 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 22, 46

Conread position: 278-534
Cow position: chr9:53602886-53602621 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 22, 173

Conread position: 278-536
Cow position: chr9:18008398-18008661 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 22, 149

Conread position: 278-540
Cow position: chr9:50203278-50203000 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 22, 0

Conread position: 278-594
Cow position: chr9:48017355-48017675 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 229
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 20, 29

Conread position: 278-615
Cow position: chr9:21462371-21462708 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 240
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 22, 82

Conread position: 278-619
Cow position: chr9:29338567-29338900 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 20, 46

Conread position: 278-661
Cow position: chr9:23388210-23388591 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 272
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 22, 52

Conread position: 278-663
Cow position: chr9:5161600-5161980 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 270
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 22, 63

Conread position: 278-663
Cow position: chr9:15982613-15983000 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 276
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 52

Conread position: 278-668
Cow position: chr9:3959525-3959140 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 260
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 22, 166

Conread position: 278-672
Cow position: chr9:3807271-3807665 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 259
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 22, 66

Conread position: 278-675
Cow position: chr9:8868667-8869069 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 284
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 23, 52

Conread position: 278-675
Cow position: chr9:28773586-28773194 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 279
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 23, 53

Conread position: 278-676
Cow position: chr9:5246315-5245933 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 65

Conread position: 278-676
Cow position: chr9:20407104-20406707 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 276
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 23, 52

Conread position: 278-676
Cow position: chr9:24726210-24726606 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 52

Conread position: 278-676
Cow position: chr9:62442759-62442362 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 75

Conread position: 278-677
Cow position: chr9:9723415-9723813 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 263
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 22, 73

Conread position: 278-677
Cow position: chr9:15805456-15805850 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 282
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 22, 70

Conread position: 278-677
Cow position: chr9:21459693-21460080 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 55

Conread position: 278-677
Cow position: chr9:28747056-28747452 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 289
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 22, 52

Conread position: 278-677
Cow position: chr9:37069075-37069499 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 301
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 22, 294

Conread position: 278-678
Cow position: chr9:20416041-20416437 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 290
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 22, 39

Conread position: 278-679
Cow position: chr9:1855747-1855335 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 52

Conread position: 278-679
Cow position: chr9:3388159-3387759 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 276
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 22, 45

Conread position: 278-679
Cow position: chr9:6089572-6089161 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 290
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 21, 54

Conread position: 278-679
Cow position: chr9:7410248-7409846 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 55

Conread position: 278-679
Cow position: chr9:10308542-10308940 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 289
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 47

Conread position: 278-679
Cow position: chr9:11299222-11299622 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 273
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 148

Conread position: 278-679
Cow position: chr9:20988973-20989387 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 285
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 23, 179

Conread position: 278-679
Cow position: chr9:22443144-22443559 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 304
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 20, 53

Conread position: 278-679
Cow position: chr9:24997030-24997451 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 310
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 46

Conread position: 278-679
Cow position: chr9:29184669-29185064 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 282
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 22, 12

Conread position: 278-679
Cow position: chr9:35305614-35306049 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 291
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 22, 350

Conread position: 278-679
Cow position: chr9:35375890-35375496 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 284
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 22, 55

Conread position: 278-679
Cow position: chr9:42445505-42445911 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 287
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 23, 56

Conread position: 278-679
Cow position: chr9:52407630-52407235 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 276
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 22, 63

Conread position: 278-679
Cow position: chr9:54610758-54611166 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 288
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 19, 59

Conread position: 278-679
Cow position: chr9:54997572-54997961 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 287
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 20, 88

Conread position: 279-533
Cow position: chr9:37017352-37017093 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 21, 48

Conread position: 279-677
Cow position: chr9:6191996-6192391 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 289
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 54

Conread position: 279-677
Cow position: chr9:27697262-27697657 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 281
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 20, 48

Conread position: 279-679
Cow position: chr9:27076789-27077176 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 279
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 182

Conread position: 280-533
Cow position: chr9:22617085-22616832 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 20, 53

Conread position: 280-672
Cow position: chr9:4929086-4928703 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 279
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 20, 50

Conread position: 281-544
Cow position: chr9:53109986-53109724 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 86, 48

Conread position: 281-614
Cow position: chr9:31662931-31662609 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 239
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 73, 42

Conread position: 282-487
Cow position: chr9:49279922-49279706 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 16, 0

Conread position: 282-530
Cow position: chr9:47926375-47926119 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 64, 127

Conread position: 282-678
Cow position: chr9:16218183-16218577 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 48

Conread position: 290-673
Cow position: chr9:55074677-55075059 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 269
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 10, 57

Conread position: 303-640
Cow position: chr9:32305987-32306322 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 228
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 142, 68

Conread position: 303-678
Cow position: chr9:9443144-9443534 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 270
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 67, 253

Conread position: 306-674
Cow position: chr9:214017-214389 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 265
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 68, 189

Conread position: 308-536
Cow position: chr9:20810629-20810855 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 64, 21

Conread position: 324-679
Cow position: chr9:50080617-50080978 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 250
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 30, 231

Conread position: 331-679
Cow position: chr9:5501267-5500926 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 260
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 11

Conread position: 334-679
Cow position: chr9:36623048-36623375 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 149, 30

Conread position: 334-679
Cow position: chr9:42498246-42497894 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 85

Conread position: 370-675
Cow position: chr9:14974555-14974858 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 204
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 114, 11

Conread position: 386-533
Cow position: chr9:40216617-40216471 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 122
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 127, 63

Conread position: 386-533
Cow position: chr9:59386423-59386568 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 31

Conread position: 386-677
Cow position: chr9:5763273-5763561 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 98, 149

Conread position: 386-677
Cow position: chr9:38793376-38793084 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 203
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 97, 160

Conread position: 386-679
Cow position: chr9:10092039-10092323 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 198
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 35, 12

Conread position: 386-679
Cow position: chr9:26391121-26390836 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 187, 89

Conread position: 386-679
Cow position: chr9:58439429-58439711 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 156, 46

Conread position: 386-679
Cow position: chr9:62657149-62656870 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 199
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 99, 151

Conread position: 387-677
Cow position: chr9:20739059-20738772 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 196
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 65, 151

Conread position: 387-677
Cow position: chr9:34957696-34957982 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 205, 157

Conread position: 388-532
Cow position: chr9:60081499-60081359 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 95, 0

Conread position: 388-679
Cow position: chr9:38344250-38343959 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 223
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 33, 29

Conread position: 389-679
Cow position: chr9:18002598-18002883 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 35, 28

Conread position: 392-533
Cow position: chr9:5218829-5218970 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 393-533
Cow position: chr9:54177895-54178040 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 393-677
Cow position: chr9:29841239-29840955 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 66, 154

Conread position: 394-675
Cow position: chr9:5226816-5227098 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 170, 155

Conread position: 398-679
Cow position: chr9:5319974-5319702 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 86, 124

Conread position: 401-679
Cow position: chr9:53412908-53413179 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 78, 35

Conread position: 402-679
Cow position: chr9:6933731-6934005 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 80, 134

Conread position: 404-679
Cow position: chr9:41513981-41513692 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 94, 55

Conread position: 418-667
Cow position: chr9:50976921-50977167 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 62, 119

Conread position: 420-679
Cow position: chr9:41416673-41416420 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 124, 0

Conread position: 433-679
Cow position: chr9:17799960-17799698 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 15, 89

Conread position: 443-677
Cow position: chr9:22696516-22696292 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 446-677
Cow position: chr9:15215384-15215615 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 105

Conread position: 446-677
Cow position: chr9:35533655-35533882 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 127, 104

Conread position: 446-679
Cow position: chr9:29034739-29034962 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 92

Conread position: 449-679
Cow position: chr9:35850192-35849972 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 145, 88

Conread position: 456-678
Cow position: chr9:49764943-49764726 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 68

Show alignments to all cow chromosomes.