Cow genome map
| Conread name: | Ova1-OVRM10182C05 |
| Conread position: | 1-167 |
| Cow position: | chr11:38505564-38505399 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-172 |
| Cow position: | chr11:31874728-31874557 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 58, 103 |
| Conread position: | 1-174 |
| Cow position: | chr11:52886000-52885838 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-178 |
| Cow position: | chr11:1496038-1495867 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-178 |
| Cow position: | chr11:5343176-5342999 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr11:8245356-8245533 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr11:9606535-9606359 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-178 |
| Cow position: | chr11:10090724-10090900 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 1-178 |
| Cow position: | chr11:11988155-11988332 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr11:15983665-15983843 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-178 |
| Cow position: | chr11:19102438-19102261 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr11:20734201-20734024 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr11:23877351-23877528 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr11:28108191-28108368 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr11:33194512-33194336 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 1-178 |
| Cow position: | chr11:36744139-36743963 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 1-178 |
| Cow position: | chr11:41170645-41170468 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr11:47760649-47760472 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr11:53432018-53431841 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr11:58134435-58134612 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr11:61401010-61400833 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr11:62229237-62229411 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-178 |
| Cow position: | chr11:63655296-63655119 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr11:64046039-64046216 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr11:64082042-64081865 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr11:67450539-67450716 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr11:67846530-67846353 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr11:73477349-73477526 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr11:85393763-85393587 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-181 |
| Cow position: | chr11:4041047-4040868 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 85, 37 |
| Conread position: | 1-181 |
| Cow position: | chr11:10847490-10847671 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 1-181 |
| Cow position: | chr11:12358376-12358195 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 1-181 |
| Cow position: | chr11:19064208-19064028 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-181 |
| Cow position: | chr11:24393367-24393549 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 1-181 |
| Cow position: | chr11:28229716-28229536 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-181 |
| Cow position: | chr11:46246518-46246328 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 145, 50 |
| Conread position: | 1-181 |
| Cow position: | chr11:57628005-57627826 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-215 |
| Cow position: | chr11:31926219-31926427 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 63, 37 |
| Conread position: | 2-178 |
| Cow position: | chr11:9734621-9734443 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 3-178 |
| Cow position: | chr11:9157108-9156935 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 5-181 |
| Cow position: | chr11:52419435-52419619 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 7-181 |
| Cow position: | chr11:20510178-20510350 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 170, 22 |
| Conread position: | 11-178 |
| Cow position: | chr11:42432203-42432368 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 127, 54 |
| Conread position: | 21-178 |
| Cow position: | chr11:71329656-71329813 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-191 |
| Cow position: | chr11:76374144-76373975 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 143, 117 |
| Conread position: | 23-178 |
| Cow position: | chr11:22934861-22935015 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 29-182 |
| Cow position: | chr11:26625877-26625727 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 148, 43 |
| Conread position: | 42-178 |
| Cow position: | chr11:53287083-53286947 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 172-512 |
| Cow position: | chr11:9753537-9753888 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 36, 140 |
Show alignments to all cow chromosomes.