Cow genome map
| Conread name: | Ova1-OVRM10182C05 |
| Conread position: | 1-139 |
| Cow position: | chr9:1995680-1995542 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-143 |
| Cow position: | chr9:163275-163133 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-169 |
| Cow position: | chr9:25484099-25484267 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-170 |
| Cow position: | chr9:16176002-16176169 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 1-172 |
| Cow position: | chr9:13476653-13476481 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 1-173 |
| Cow position: | chr9:59511618-59511789 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-177 |
| Cow position: | chr9:130961-130784 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1-177 |
| Cow position: | chr9:4532726-4532903 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 1-177 |
| Cow position: | chr9:21381067-21380892 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 50, 36 |
| Conread position: | 1-177 |
| Cow position: | chr9:25035617-25035441 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr9:1075969-1075792 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr9:1251766-1251591 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 1-178 |
| Cow position: | chr9:3543073-3543250 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr9:3566617-3566430 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-178 |
| Cow position: | chr9:3803572-3803749 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr9:6830275-6830099 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 75, 48 |
| Conread position: | 1-178 |
| Cow position: | chr9:7061860-7061683 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr9:9013333-9013509 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 1-178 |
| Cow position: | chr9:16268600-16268777 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr9:17064159-17063982 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr9:22653801-22653978 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr9:27934316-27934493 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr9:28022032-28022210 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 87, 70 |
| Conread position: | 1-178 |
| Cow position: | chr9:28440037-28440213 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 1-178 |
| Cow position: | chr9:28678201-28678378 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr9:29628515-29628340 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-178 |
| Cow position: | chr9:31064661-31064838 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr9:36724730-36724907 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr9:42309916-42310093 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr9:44818418-44818588 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-178 |
| Cow position: | chr9:45873575-45873751 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-178 |
| Cow position: | chr9:49177599-49177422 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr9:50790942-50791119 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr9:51181955-51181779 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 1-178 |
| Cow position: | chr9:51210910-51211087 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr9:59173925-59173741 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-178 |
| Cow position: | chr9:59455032-59454855 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-178 |
| Cow position: | chr9:59536330-59536502 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-178 |
| Cow position: | chr9:60277787-60277611 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-178 |
| Cow position: | chr9:64018233-64018056 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-181 |
| Cow position: | chr9:3006016-3005835 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 1-181 |
| Cow position: | chr9:7003017-7003198 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 1-181 |
| Cow position: | chr9:25754995-25754815 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-181 |
| Cow position: | chr9:29027969-29027789 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 170, 70 |
| Conread position: | 1-181 |
| Cow position: | chr9:30826910-30827088 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-186 |
| Cow position: | chr9:47002424-47002609 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-187 |
| Cow position: | chr9:60651484-60651298 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-178 |
| Cow position: | chr9:1980221-1980396 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-197 |
| Cow position: | chr9:5514663-5514851 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 137, 29 |
| Conread position: | 7-181 |
| Cow position: | chr9:31807805-31807980 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 17-172 |
| Cow position: | chr9:44795522-44795677 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 172-544 |
| Cow position: | chr9:61129133-61128749 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 129 |
Show alignments to all cow chromosomes.