Non-Coding RNA Search

Cow genome map


           Conread name:
           Ova1-OVRM10184E10
        

               Conread position:
               328-697
               

               Cow position:
               chr3:56678038-56678398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               254
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               5, 65
               

               Conread position:
               389-644
               

               Cow position:
               chr3:8147260-8147520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               10, 45
               

               Conread position:
               404-687
               

               Cow position:
               chr3:175194-174911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 60
               

               Conread position:
               417-636
               

               Cow position:
               chr3:62998755-62998978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 163
               

               Conread position:
               431-686
               

               Cow position:
               chr3:71238370-71238118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               79, 52
               

               Conread position:
               432-688
               

               Cow position:
               chr3:5149729-5149993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               436-686
               

               Cow position:
               chr3:81616232-81616490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               439-610
               

               Cow position:
               chr3:72626531-72626705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               443-632
               

               Cow position:
               chr3:42589308-42589116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               444-689
               

               Cow position:
               chr3:4120165-4120405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               71, 12
               

               Conread position:
               444-694
               

               Cow position:
               chr3:37041625-37041375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               187
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               23, 7
               

               Conread position:
               447-696
               

               Cow position:
               chr3:24548623-24548883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               449-636
               

               Cow position:
               chr3:29234471-29234667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               450-694
               

               Cow position:
               chr3:4319921-4319667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               62, 29
               

               Conread position:
               451-631
               

               Cow position:
               chr3:33460397-33460590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               451-689
               

               Cow position:
               chr3:20043393-20043631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               32, 61
               

               Conread position:
               453-658
               

               Cow position:
               chr3:19044570-19044774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               52, 7
               

               Conread position:
               454-587
               

               Cow position:
               chr3:52147242-52147379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               58, 77
               

               Conread position:
               454-622
               

               Cow position:
               chr3:19641269-19641087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               455-592
               

               Cow position:
               chr3:66563983-66563842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               455-657
               

               Cow position:
               chr3:55730267-55730476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               455-666
               

               Cow position:
               chr3:79893298-79893514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               57, 112
               

               Conread position:
               455-676
               

               Cow position:
               chr3:83934922-83934697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               60, 102
               

               Conread position:
               455-688
               

               Cow position:
               chr3:57754275-57754514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               30, 95
               

               Conread position:
               455-694
               

               Cow position:
               chr3:1830373-1830616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               21, 37
               

               Conread position:
               456-615
               

               Cow position:
               chr3:7408634-7408471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               55, 8
               

               Conread position:
               456-622
               

               Cow position:
               chr3:30682834-30682997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               137, 9
               

               Conread position:
               456-672
               

               Cow position:
               chr3:44534335-44534553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               11, 87
               

               Conread position:
               456-689
               

               Cow position:
               chr3:59649450-59649218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               137, 55
               

               Conread position:
               456-694
               

               Cow position:
               chr3:55970713-55970463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               27, 137
               

               Conread position:
               456-694
               

               Cow position:
               chr3:71496930-71497182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               457-689
               

               Cow position:
               chr3:39912491-39912728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               55, 102
               

               Conread position:
               457-691
               

               Cow position:
               chr3:39066528-39066291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               11, 113
               

               Conread position:
               457-694
               

               Cow position:
               chr3:53384085-53384324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               58, 22
               

               Conread position:
               458-631
               

               Cow position:
               chr3:42484123-42483945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               460-687
               

               Cow position:
               chr3:15153882-15153654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               22, 87
               

               Conread position:
               461-631
               

               Cow position:
               chr3:621631-621453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               54, 9
               

               Conread position:
               461-647
               

               Cow position:
               chr3:67942338-67942533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               461-694
               

               Cow position:
               chr3:77271097-77271321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               132, 18
               

               Conread position:
               462-644
               

               Cow position:
               chr3:3453773-3453585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               464-646
               

               Cow position:
               chr3:80173188-80173003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               48, 108
               

               Conread position:
               465-601
               

               Cow position:
               chr3:17952778-17952643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               47, 16
               

               Conread position:
               465-671
               

               Cow position:
               chr3:58101863-58101658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               47, 82
               

               Conread position:
               465-694
               

               Cow position:
               chr3:68303507-68303272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 193
               

               Conread position:
               466-599
               

               Cow position:
               chr3:23733285-23733420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               46, 13
               

               Conread position:
               466-633
               

               Cow position:
               chr3:32436825-32436655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               47, 114
               

               Conread position:
               466-641
               

               Cow position:
               chr3:2538423-2538249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               46, 16
               

               Conread position:
               466-665
               

               Cow position:
               chr3:20065960-20066169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               466-689
               

               Cow position:
               chr3:18185270-18185036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               17, 119
               

               Conread position:
               467-646
               

               Cow position:
               chr3:61680503-61680321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               48, 158
               

               Conread position:
               467-672
               

               Cow position:
               chr3:45183635-45183855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               467-686
               

               Cow position:
               chr3:19711150-19711374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               16, 30
               

               Conread position:
               467-687
               

               Cow position:
               chr3:72745370-72745600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               48, 21
               

               Conread position:
               467-694
               

               Cow position:
               chr3:68145667-68145887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 80
               

               Conread position:
               468-617
               

               Cow position:
               chr3:18301383-18301537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               468-618
               

               Cow position:
               chr3:26792639-26792495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               45, 76
               

               Conread position:
               468-620
               

               Cow position:
               chr3:4268389-4268545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               47, 106
               

               Conread position:
               468-621
               

               Cow position:
               chr3:18764290-18764131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               468-622
               

               Cow position:
               chr3:6547611-6547452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               468-630
               

               Cow position:
               chr3:43016255-43016431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               468-631
               

               Cow position:
               chr3:58558467-58558298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               468-633
               

               Cow position:
               chr3:22734076-22734241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               45, 100
               

               Conread position:
               468-633
               

               Cow position:
               chr3:51153229-51153062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               47, 110
               

               Conread position:
               468-645
               

               Cow position:
               chr3:6049101-6049284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               42, 104
               

               Conread position:
               468-645
               

               Cow position:
               chr3:66884845-66885026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 100
               

               Conread position:
               468-646
               

               Cow position:
               chr3:51577940-51578117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               116, 47
               

               Conread position:
               468-647
               

               Cow position:
               chr3:69849113-69849290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               42, 77
               

               Conread position:
               468-657
               

               Cow position:
               chr3:70431615-70431423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               15, 45
               

               Conread position:
               468-657
               

               Cow position:
               chr3:78258564-78258762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               468-662
               

               Cow position:
               chr3:64800362-64800562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               468-663
               

               Cow position:
               chr3:76168444-76168645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               161
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               468-665
               

               Cow position:
               chr3:27286701-27286503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               12, 78
               

               Conread position:
               468-666
               

               Cow position:
               chr3:6265976-6265769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               15, 106
               

               Conread position:
               468-667
               

               Cow position:
               chr3:16710611-16710816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               41, 112
               

               Conread position:
               468-667
               

               Cow position:
               chr3:83672041-83671838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 90
               

               Conread position:
               468-671
               

               Cow position:
               chr3:9718064-9718272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               47, 194
               

               Conread position:
               468-671
               

               Cow position:
               chr3:35075057-35074857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               120, 47
               

               Conread position:
               468-671
               

               Cow position:
               chr3:61023835-61024044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 21
               

               Conread position:
               468-671
               

               Cow position:
               chr3:62789764-62789973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               16, 191
               

               Conread position:
               468-671
               

               Cow position:
               chr3:74234369-74234165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               10, 46
               

               Conread position:
               468-672
               

               Cow position:
               chr3:53875577-53875787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               468-673
               

               Cow position:
               chr3:82195670-82195463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               15, 100
               

               Conread position:
               468-682
               

               Cow position:
               chr3:4549202-4548995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               125, 49
               

               Conread position:
               468-682
               

               Cow position:
               chr3:48483362-48483146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               45, 19
               

               Conread position:
               468-682
               

               Cow position:
               chr3:76138646-76138439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 118
               

               Conread position:
               468-685
               

               Cow position:
               chr3:59040754-59040534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               47, 15
               

               Conread position:
               468-686
               

               Cow position:
               chr3:15159216-15158995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 46
               

               Conread position:
               468-686
               

               Cow position:
               chr3:18459352-18459564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               44, 69
               

               Conread position:
               468-686
               

               Cow position:
               chr3:22888829-22889053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               47, 66
               

               Conread position:
               468-687
               

               Cow position:
               chr3:15443539-15443765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               178
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               18, 197
               

               Conread position:
               468-687
               

               Cow position:
               chr3:70761936-70762157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               10, 88
               

               Conread position:
               468-688
               

               Cow position:
               chr3:17694815-17695040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               17, 187
               

               Conread position:
               468-689
               

               Cow position:
               chr3:5345052-5345291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               10, 112
               

               Conread position:
               468-689
               

               Cow position:
               chr3:10842001-10841773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               468-689
               

               Cow position:
               chr3:20674694-20674913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               41, 72
               

               Conread position:
               468-689
               

               Cow position:
               chr3:39996709-39996930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               44, 19
               

               Conread position:
               468-689
               

               Cow position:
               chr3:42796333-42796555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               45, 103
               

               Conread position:
               468-689
               

               Cow position:
               chr3:49679320-49679093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               17, 99
               

               Conread position:
               468-691
               

               Cow position:
               chr3:7763843-7763615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               468-691
               

               Cow position:
               chr3:49383157-49382908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               468-692
               

               Cow position:
               chr3:8181764-8181993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               44, 161
               

               Conread position:
               468-692
               

               Cow position:
               chr3:53222197-53221970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               45, 77
               

               Conread position:
               468-692
               

               Cow position:
               chr3:53790356-53790577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               15, 45
               

               Conread position:
               468-693
               

               Cow position:
               chr3:80709678-80709910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               468-694
               

               Cow position:
               chr3:4071584-4071807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               42, 139
               

               Conread position:
               468-694
               

               Cow position:
               chr3:12090864-12090629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               14, 152
               

               Conread position:
               468-694
               

               Cow position:
               chr3:19586050-19585820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 105
               

               Conread position:
               468-694
               

               Cow position:
               chr3:23920239-23920473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               178
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               468-694
               

               Cow position:
               chr3:31225607-31225392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               125, 58
               

               Conread position:
               468-694
               

               Cow position:
               chr3:33252707-33252933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               47, 75
               

               Conread position:
               468-694
               

               Cow position:
               chr3:53318595-53318357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               468-694
               

               Cow position:
               chr3:75687252-75687481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               44, 116
               

               Conread position:
               468-695
               

               Cow position:
               chr3:7330953-7331168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               126, 42
               

               Conread position:
               468-697
               

               Cow position:
               chr3:9662984-9663219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               180
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               468-697
               

               Cow position:
               chr3:23877180-23876950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               15, 32
               

               Conread position:
               468-698
               

               Cow position:
               chr3:59035226-59034990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               45, 13
               

               Conread position:
               469-671
               

               Cow position:
               chr3:2506291-2506499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               21, 148
               

               Conread position:
               469-671
               

               Cow position:
               chr3:70402822-70402623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               46, 79
               

               Conread position:
               470-630
               

               Cow position:
               chr3:2637128-2636969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 74
               

               Conread position:
               470-635
               

               Cow position:
               chr3:8522971-8523139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               45, 91
               

               Conread position:
               470-663
               

               Cow position:
               chr3:25702147-25702355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               470-671
               

               Cow position:
               chr3:12178244-12178034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               470-688
               

               Cow position:
               chr3:31419879-31419654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               470-694
               

               Cow position:
               chr3:56476858-56476638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               15, 46
               

               Conread position:
               470-747
               

               Cow position:
               chr3:17304787-17305075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               45, 63
               

               Conread position:
               472-632
               

               Cow position:
               chr3:2636753-2636912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               43, 118
               

               Conread position:
               472-643
               

               Cow position:
               chr3:77098643-77098816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               43, 75
               

               Conread position:
               472-657
               

               Cow position:
               chr3:54350253-54350448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               472-661
               

               Cow position:
               chr3:4931648-4931851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               12, 193
               

               Conread position:
               472-661
               

               Cow position:
               chr3:21112461-21112649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               43, 96
               

               Conread position:
               472-672
               

               Cow position:
               chr3:15160698-15160498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               40, 83
               

               Conread position:
               472-682
               

               Cow position:
               chr3:38828932-38828727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               43, 70
               

               Conread position:
               472-688
               

               Cow position:
               chr3:49363287-49363071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               41, 11
               

               Conread position:
               472-689
               

               Cow position:
               chr3:38035407-38035629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               43, 125
               

               Conread position:
               472-689
               

               Cow position:
               chr3:45667162-45667385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               41, 74
               

               Conread position:
               472-692
               

               Cow position:
               chr3:23131987-23132211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               41, 98
               

               Conread position:
               472-694
               

               Cow position:
               chr3:11281950-11281722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               472-697
               

               Cow position:
               chr3:56948915-56949135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               37, 73
               

               Conread position:
               472-699
               

               Cow position:
               chr3:68648358-68648116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               41, 113
               

               Conread position:
               473-629
               

               Cow position:
               chr3:22899551-22899712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               42, 94
               

               Conread position:
               473-637
               

               Cow position:
               chr3:20802460-20802618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               39, 85
               

               Conread position:
               473-657
               

               Cow position:
               chr3:58614645-58614449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               473-666
               

               Cow position:
               chr3:25735722-25735922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               473-671
               

               Cow position:
               chr3:986195-985993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               160
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               42, 118
               

               Conread position:
               473-689
               

               Cow position:
               chr3:30462996-30463210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               39, 52
               

               Conread position:
               473-691
               

               Cow position:
               chr3:21866858-21867079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               37, 62
               

               Conread position:
               473-691
               

               Cow position:
               chr3:79272396-79272614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               41, 72
               

               Conread position:
               473-692
               

               Cow position:
               chr3:53604564-53604789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               42, 91
               

               Conread position:
               473-694
               

               Cow position:
               chr3:9025907-9026128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               39, 18
               

               Conread position:
               473-694
               

               Cow position:
               chr3:31309174-31309398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               473-694
               

               Cow position:
               chr3:53910286-53910065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               39, 79
               

               Conread position:
               473-694
               

               Cow position:
               chr3:57577876-57577653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               176
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               37, 52
               

               Conread position:
               473-699
               

               Cow position:
               chr3:15228661-15228872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               121, 42
               

               Conread position:
               474-628
               

               Cow position:
               chr3:44218947-44218787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               474-646
               

               Cow position:
               chr3:635357-635181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               41, 96
               

               Conread position:
               474-646
               

               Cow position:
               chr3:60371163-60370986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               474-667
               

               Cow position:
               chr3:11027456-11027257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               46, 172
               

               Conread position:
               474-671
               

               Cow position:
               chr3:24304447-24304646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               29, 9
               

               Conread position:
               474-689
               

               Cow position:
               chr3:29946565-29946348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               32, 14
               

               Conread position:
               474-691
               

               Cow position:
               chr3:43233682-43233465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               41, 71
               

               Conread position:
               474-692
               

               Cow position:
               chr3:22165235-22165457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               8, 89
               

               Conread position:
               474-694
               

               Cow position:
               chr3:72342427-72342201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               474-694
               

               Cow position:
               chr3:75853156-75853369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               38, 80
               

               Conread position:
               474-697
               

               Cow position:
               chr3:83988713-83988486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               38, 142
               

               Conread position:
               475-602
               

               Cow position:
               chr3:79877209-79877075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               475-672
               

               Cow position:
               chr3:76056110-76056307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               40, 67
               

               Conread position:
               475-673
               

               Cow position:
               chr3:75158533-75158338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               37, 136
               

               Conread position:
               475-681
               

               Cow position:
               chr3:65237201-65236993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               37, 72
               

               Conread position:
               475-686
               

               Cow position:
               chr3:54297301-54297518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               9, 131
               

               Conread position:
               475-689
               

               Cow position:
               chr3:78443392-78443606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               36, 8
               

               Conread position:
               476-646
               

               Cow position:
               chr3:32248192-32248015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               476-657
               

               Cow position:
               chr3:80958332-80958518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               476-658
               

               Cow position:
               chr3:17531559-17531746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               37, 97
               

               Conread position:
               476-660
               

               Cow position:
               chr3:2016609-2016425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               39, 72
               

               Conread position:
               476-667
               

               Cow position:
               chr3:68289860-68289663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               38, 182
               

               Conread position:
               476-670
               

               Cow position:
               chr3:31793704-31793904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               476-694
               

               Cow position:
               chr3:21014779-21015002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               476-694
               

               Cow position:
               chr3:51033549-51033322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               477-672
               

               Cow position:
               chr3:34871745-34871545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               5, 139
               

               Conread position:
               477-683
               

               Cow position:
               chr3:8813927-8814146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               7, 21
               

               Conread position:
               477-687
               

               Cow position:
               chr3:23203053-23203268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               35, 133
               

               Conread position:
               477-689
               

               Cow position:
               chr3:77188616-77188399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               38, 97
               

               Conread position:
               478-688
               

               Cow position:
               chr3:30438559-30438773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               37, 21
               

               Conread position:
               478-694
               

               Cow position:
               chr3:48241781-48241575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               34, 14
               

               Conread position:
               479-610
               

               Cow position:
               chr3:58562875-58562739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               36, 92
               

               Conread position:
               479-622
               

               Cow position:
               chr3:31352710-31352846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               114, 26
               

               Conread position:
               479-629
               

               Cow position:
               chr3:22078252-22078096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               479-631
               

               Cow position:
               chr3:37641500-37641345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               35, 88
               

               Conread position:
               479-631
               

               Cow position:
               chr3:48537540-48537381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               479-632
               

               Cow position:
               chr3:58929358-58929517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               479-636
               

               Cow position:
               chr3:23753658-23753505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               36, 69
               

               Conread position:
               479-636
               

               Cow position:
               chr3:43895889-43896046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               36, 68
               

               Conread position:
               479-637
               

               Cow position:
               chr3:49787730-49787571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               33, 68
               

               Conread position:
               479-638
               

               Cow position:
               chr3:55105972-55106137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               479-638
               

               Cow position:
               chr3:74515162-74515326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               36, 78
               

               Conread position:
               479-639
               

               Cow position:
               chr3:34142538-34142700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               32, 62
               

               Conread position:
               479-646
               

               Cow position:
               chr3:21694401-21694228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               34, 55
               

               Conread position:
               479-646
               

               Cow position:
               chr3:46146555-46146723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               34, 82
               

               Conread position:
               479-646
               

               Cow position:
               chr3:76300948-76300774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               31, 111
               

               Conread position:
               479-649
               

               Cow position:
               chr3:17039784-17039613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               104, 25
               

               Conread position:
               479-655
               

               Cow position:
               chr3:26337842-26338025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               479-655
               

               Cow position:
               chr3:52845729-52845551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               34, 66
               

               Conread position:
               479-657
               

               Cow position:
               chr3:44207703-44207885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               41, 136
               

               Conread position:
               479-657
               

               Cow position:
               chr3:80910771-80910588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               35, 92
               

               Conread position:
               479-658
               

               Cow position:
               chr3:3163941-3164118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               85, 33
               

               Conread position:
               479-661
               

               Cow position:
               chr3:38331436-38331623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               36, 92
               

               Conread position:
               479-669
               

               Cow position:
               chr3:59681733-59681923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               33, 78
               

               Conread position:
               479-670
               

               Cow position:
               chr3:23037334-23037527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               36, 49
               

               Conread position:
               479-671
               

               Cow position:
               chr3:35883758-35883955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               33, 190
               

               Conread position:
               479-671
               

               Cow position:
               chr3:43388951-43389149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               479-671
               

               Cow position:
               chr3:59947842-59947644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               479-671
               

               Cow position:
               chr3:72027813-72027617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               36, 176
               

               Conread position:
               479-672
               

               Cow position:
               chr3:18479122-18479320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               36, 128
               

               Conread position:
               479-672
               

               Cow position:
               chr3:19793071-19792883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               33, 61
               

               Conread position:
               479-672
               

               Cow position:
               chr3:28896847-28897041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               33, 92
               

               Conread position:
               479-672
               

               Cow position:
               chr3:29334237-29334436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               36, 9
               

               Conread position:
               479-672
               

               Cow position:
               chr3:51150304-51150106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               30, 20
               

               Conread position:
               479-672
               

               Cow position:
               chr3:73589592-73589793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               479-672
               

               Cow position:
               chr3:78071618-78071814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               33, 67
               

               Conread position:
               479-675
               

               Cow position:
               chr3:4271539-4271347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               114, 60
               

               Conread position:
               479-677
               

               Cow position:
               chr3:75966608-75966808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               36, 76
               

               Conread position:
               479-682
               

               Cow position:
               chr3:5703350-5703146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               36, 134
               

               Conread position:
               479-685
               

               Cow position:
               chr3:30357683-30357487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               27, 70
               

               Conread position:
               479-685
               

               Cow position:
               chr3:67520002-67520204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               33, 75
               

               Conread position:
               479-686
               

               Cow position:
               chr3:48459155-48459365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               33, 68
               

               Conread position:
               479-686
               

               Cow position:
               chr3:75050449-75050653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               33, 67
               

               Conread position:
               479-686
               

               Cow position:
               chr3:76267799-76268011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               5, 68
               

               Conread position:
               479-687
               

               Cow position:
               chr3:39873534-39873730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               144, 39
               

               Conread position:
               479-687
               

               Cow position:
               chr3:48253053-48252848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               115, 36
               

               Conread position:
               479-687
               

               Cow position:
               chr3:55177577-55177783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               36, 79
               

               Conread position:
               479-687
               

               Cow position:
               chr3:77365118-77365327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               114, 32
               

               Conread position:
               479-688
               

               Cow position:
               chr3:26982223-26982020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               114, 28
               

               Conread position:
               479-688
               

               Cow position:
               chr3:59588818-59588601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               35, 186
               

               Conread position:
               479-689
               

               Cow position:
               chr3:27082867-27083088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               33, 78
               

               Conread position:
               479-689
               

               Cow position:
               chr3:27274701-27274492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               57, 34
               

               Conread position:
               479-689
               

               Cow position:
               chr3:35055802-35056017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               31, 92
               

               Conread position:
               479-689
               

               Cow position:
               chr3:59605016-59604807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               34, 66
               

               Conread position:
               479-689
               

               Cow position:
               chr3:68156901-68156683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               479-689
               

               Cow position:
               chr3:70333795-70334004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               33, 112
               

               Conread position:
               479-689
               

               Cow position:
               chr3:72474096-72473876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               36, 92
               

               Conread position:
               479-691
               

               Cow position:
               chr3:2518367-2518580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               41, 76
               

               Conread position:
               479-691
               

               Cow position:
               chr3:17456093-17456309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               36, 100
               

               Conread position:
               479-691
               

               Cow position:
               chr3:50768853-50768638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               34, 64
               

               Conread position:
               479-692
               

               Cow position:
               chr3:3316634-3316857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               35, 159
               

               Conread position:
               479-692
               

               Cow position:
               chr3:16752080-16752300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               33, 161
               

               Conread position:
               479-692
               

               Cow position:
               chr3:55189576-55189796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               34, 94
               

               Conread position:
               479-694
               

               Cow position:
               chr3:1011666-1011442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               36, 102
               

               Conread position:
               479-694
               

               Cow position:
               chr3:2648334-2648554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               36, 94
               

               Conread position:
               479-694
               

               Cow position:
               chr3:5040129-5040351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               36, 116
               

               Conread position:
               479-694
               

               Cow position:
               chr3:14553046-14552831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 79
               

               Conread position:
               479-694
               

               Cow position:
               chr3:20841705-20841917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               23, 59
               

               Conread position:
               479-694
               

               Cow position:
               chr3:22221500-22221284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               43, 67
               

               Conread position:
               479-694
               

               Cow position:
               chr3:24468210-24468425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               172
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               33, 175
               

               Conread position:
               479-694
               

               Cow position:
               chr3:27696790-27697022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               36, 141
               

               Conread position:
               479-694
               

               Cow position:
               chr3:55819923-55819714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               36, 69
               

               Conread position:
               479-694
               

               Cow position:
               chr3:59474294-59474078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               36, 64
               

               Conread position:
               479-694
               

               Cow position:
               chr3:59702348-59702128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               36, 163
               

               Conread position:
               479-694
               

               Cow position:
               chr3:65058873-65058656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               23, 84
               

               Conread position:
               479-694
               

               Cow position:
               chr3:69785446-69785669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               34, 62
               

               Conread position:
               479-694
               

               Cow position:
               chr3:71231572-71231352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               32, 93
               

               Conread position:
               479-697
               

               Cow position:
               chr3:15973744-15973519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               479-697
               

               Cow position:
               chr3:30940979-30940754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               82, 41
               

               Conread position:
               479-697
               

               Cow position:
               chr3:48900156-48900379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               32, 165
               

               Conread position:
               479-699
               

               Cow position:
               chr3:66631169-66631401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               479-701
               

               Cow position:
               chr3:14601538-14601762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               114, 31
               

               Conread position:
               480-671
               

               Cow position:
               chr3:59272004-59271812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               31, 85
               

               Conread position:
               480-682
               

               Cow position:
               chr3:11640905-11640701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               32, 21
               

               Conread position:
               480-687
               

               Cow position:
               chr3:13380105-13380312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               35, 68
               

               Conread position:
               480-691
               

               Cow position:
               chr3:53271007-53270789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               480-692
               

               Cow position:
               chr3:54506879-54506665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               33, 65
               

               Conread position:
               480-694
               

               Cow position:
               chr3:3032582-3032365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               31, 68
               

               Conread position:
               481-603
               

               Cow position:
               chr3:42933655-42933528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               481-621
               

               Cow position:
               chr3:66354853-66354708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               34, 18
               

               Conread position:
               481-621
               

               Cow position:
               chr3:73410455-73410316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 49
               

               Conread position:
               481-621
               

               Cow position:
               chr3:78115418-78115563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               481-628
               

               Cow position:
               chr3:48566517-48566670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               481-644
               

               Cow position:
               chr3:79398317-79398148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               481-646
               

               Cow position:
               chr3:37851668-37851500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               14, 32
               

               Conread position:
               481-646
               

               Cow position:
               chr3:46259884-46259714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               32, 97
               

               Conread position:
               481-658
               

               Cow position:
               chr3:15859210-15859387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               31, 74
               

               Conread position:
               481-664
               

               Cow position:
               chr3:53266650-53266463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               481-664
               

               Cow position:
               chr3:58010662-58010842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               107, 31
               

               Conread position:
               481-665
               

               Cow position:
               chr3:59317872-59317687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               34, 67
               

               Conread position:
               481-668
               

               Cow position:
               chr3:36411918-36412106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               112, 22
               

               Conread position:
               481-671
               

               Cow position:
               chr3:79271537-79271732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               31, 58
               

               Conread position:
               481-672
               

               Cow position:
               chr3:7381660-7381851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               33, 52
               

               Conread position:
               481-672
               

               Cow position:
               chr3:47198954-47199149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               28, 49
               

               Conread position:
               481-672
               

               Cow position:
               chr3:79339404-79339601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               39, 56
               

               Conread position:
               481-674
               

               Cow position:
               chr3:45314524-45314320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               481-675
               

               Cow position:
               chr3:32376984-32376789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               481-676
               

               Cow position:
               chr3:18699936-18700137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               481-677
               

               Cow position:
               chr3:8775492-8775291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               32, 102
               

               Conread position:
               481-678
               

               Cow position:
               chr3:41366528-41366738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               481-682
               

               Cow position:
               chr3:36240281-36240075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               481-682
               

               Cow position:
               chr3:80733678-80733885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               481-683
               

               Cow position:
               chr3:52487801-52487581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               34, 184
               

               Conread position:
               481-683
               

               Cow position:
               chr3:64527018-64526815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 42
               

               Conread position:
               481-686
               

               Cow position:
               chr3:19199159-19198949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               34, 120
               

               Conread position:
               481-686
               

               Cow position:
               chr3:48468348-48468137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               481-687
               

               Cow position:
               chr3:3656687-3656477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               164
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               481-687
               

               Cow position:
               chr3:14801916-14801706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               481-687
               

               Cow position:
               chr3:27976357-27976561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               481-687
               

               Cow position:
               chr3:31055841-31056050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               481-687
               

               Cow position:
               chr3:36160028-36160231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               108, 34
               

               Conread position:
               481-687
               

               Cow position:
               chr3:54551538-54551749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               481-687
               

               Cow position:
               chr3:69144868-69144656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               481-688
               

               Cow position:
               chr3:5044638-5044851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               481-688
               

               Cow position:
               chr3:13890655-13890439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               481-688
               

               Cow position:
               chr3:14770714-14770920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               32, 68
               

               Conread position:
               481-688
               

               Cow position:
               chr3:15671981-15672192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               32, 134
               

               Conread position:
               481-688
               

               Cow position:
               chr3:15953910-15954123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               481-688
               

               Cow position:
               chr3:32310241-32310454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               481-688
               

               Cow position:
               chr3:41129886-41129673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               481-688
               

               Cow position:
               chr3:45279641-45279428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               481-688
               

               Cow position:
               chr3:49460754-49460964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               481-688
               

               Cow position:
               chr3:79824747-79824958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               32, 55
               

               Conread position:
               481-688
               

               Cow position:
               chr3:83770906-83770693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               481-688
               

               Cow position:
               chr3:84174476-84174263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               481-693
               

               Cow position:
               chr3:7860078-7860296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               481-693
               

               Cow position:
               chr3:35624371-35624588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               481-693
               

               Cow position:
               chr3:39661282-39661499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               32, 168
               

               Conread position:
               481-693
               

               Cow position:
               chr3:48851795-48852013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               481-694
               

               Cow position:
               chr3:7581546-7581761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               70, 121
               

               Conread position:
               481-694
               

               Cow position:
               chr3:32787634-32787416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               27, 59
               

               Conread position:
               481-694
               

               Cow position:
               chr3:33330006-33329773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               481-694
               

               Cow position:
               chr3:45211476-45211257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               169
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               481-694
               

               Cow position:
               chr3:51578152-51578367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               34, 68
               

               Conread position:
               481-694
               

               Cow position:
               chr3:68587191-68586979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               12, 68
               

               Conread position:
               481-694
               

               Cow position:
               chr3:83889421-83889203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               35, 171
               

               Conread position:
               481-697
               

               Cow position:
               chr3:18887744-18887517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               31, 133
               

               Conread position:
               481-699
               

               Cow position:
               chr3:2025375-2025147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               481-699
               

               Cow position:
               chr3:54481630-54481849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               111, 37
               

               Conread position:
               481-700
               

               Cow position:
               chr3:55712603-55712390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               65, 34
               

               Conread position:
               481-701
               

               Cow position:
               chr3:11253993-11254219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               481-702
               

               Cow position:
               chr3:84137642-84137866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               30, 77
               

               Conread position:
               481-704
               

               Cow position:
               chr3:6728149-6728384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               481-705
               

               Cow position:
               chr3:73525063-73525294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               481-706
               

               Cow position:
               chr3:58452217-58451993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               34, 117
               

               Conread position:
               482-620
               

               Cow position:
               chr3:83921487-83921357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               12, 25
               

               Conread position:
               482-670
               

               Cow position:
               chr3:4518013-4518198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               32, 65
               

               Conread position:
               482-672
               

               Cow position:
               chr3:65308282-65308476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               33, 133
               

               Conread position:
               482-682
               

               Cow position:
               chr3:32570029-32569821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 118
               

               Conread position:
               482-688
               

               Cow position:
               chr3:74088006-74088217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               482-689
               

               Cow position:
               chr3:54067965-54067758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               30, 171
               

               Conread position:
               482-694
               

               Cow position:
               chr3:14547170-14546958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               33, 76
               

               Conread position:
               482-694
               

               Cow position:
               chr3:18067301-18067097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               30, 51
               

               Conread position:
               482-694
               

               Cow position:
               chr3:23471292-23471503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               89, 33
               

               Conread position:
               482-694
               

               Cow position:
               chr3:52457080-52456874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               142, 63
               

               Conread position:
               482-694
               

               Cow position:
               chr3:83215440-83215218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               482-698
               

               Cow position:
               chr3:44960116-44959894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               482-699
               

               Cow position:
               chr3:13240902-13241125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               483-621
               

               Cow position:
               chr3:20888491-20888633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               483-646
               

               Cow position:
               chr3:63069191-63069362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               483-648
               

               Cow position:
               chr3:42355834-42355666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               483-668
               

               Cow position:
               chr3:36190068-36189872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               29, 5
               

               Conread position:
               483-668
               

               Cow position:
               chr3:83705365-83705555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               32, 159
               

               Conread position:
               483-682
               

               Cow position:
               chr3:32317659-32317864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               30, 85
               

               Conread position:
               483-687
               

               Cow position:
               chr3:53592516-53592726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               31, 54
               

               Conread position:
               483-688
               

               Cow position:
               chr3:58134514-58134724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               30, 85
               

               Conread position:
               483-688
               

               Cow position:
               chr3:60933588-60933379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               30, 86
               

               Conread position:
               483-692
               

               Cow position:
               chr3:57274228-57274018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               110, 32
               

               Conread position:
               483-694
               

               Cow position:
               chr3:210492-210275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               483-694
               

               Cow position:
               chr3:18059874-18059658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               32, 79
               

               Conread position:
               483-694
               

               Cow position:
               chr3:30180253-30180041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               32, 65
               

               Conread position:
               483-694
               

               Cow position:
               chr3:36375368-36375580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               31, 68
               

               Conread position:
               484-671
               

               Cow position:
               chr3:77171487-77171294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               484-681
               

               Cow position:
               chr3:70756470-70756672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               28, 192
               

               Conread position:
               484-688
               

               Cow position:
               chr3:45822850-45823060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               484-694
               

               Cow position:
               chr3:13301680-13301894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               29, 53
               

               Conread position:
               484-709
               

               Cow position:
               chr3:3584883-3584654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               21, 98
               

               Conread position:
               485-691
               

               Cow position:
               chr3:1889938-1890150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               487-668
               

               Cow position:
               chr3:28883996-28884179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               26, 61
               

               Conread position:
               487-668
               

               Cow position:
               chr3:62312964-62312778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               25, 87
               

               Conread position:
               487-668
               

               Cow position:
               chr3:62370223-62370037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               25, 87
               

               Conread position:
               487-694
               

               Cow position:
               chr3:12978449-12978661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               25, 84
               

               Conread position:
               488-612
               

               Cow position:
               chr3:76300712-76300588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               105, 23
               

               Conread position:
               488-636
               

               Cow position:
               chr3:68624384-68624231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               27, 63
               

               Conread position:
               489-673
               

               Cow position:
               chr3:72255254-72255442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               26, 109
               

               Conread position:
               489-689
               

               Cow position:
               chr3:51609020-51609223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               26, 82
               

               Conread position:
               489-694
               

               Cow position:
               chr3:1517349-1517556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               25, 58
               

               Conread position:
               489-699
               

               Cow position:
               chr3:59000599-59000801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               19, 54
               

               Conread position:
               490-676
               

               Cow position:
               chr3:40145630-40145438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               490-686
               

               Cow position:
               chr3:75238623-75238421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               162
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               490-687
               

               Cow position:
               chr3:19793427-19793627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               25, 73
               

               Conread position:
               490-694
               

               Cow position:
               chr3:66900564-66900777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               25, 9
               

               Conread position:
               490-694
               

               Cow position:
               chr3:73820202-73820412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               23, 191
               

               Conread position:
               490-717
               

               Cow position:
               chr3:59828225-59828460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               491-616
               

               Cow position:
               chr3:14589068-14589197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               24, 93
               

               Conread position:
               491-687
               

               Cow position:
               chr3:7566259-7566454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               21, 57
               

               Conread position:
               492-697
               

               Cow position:
               chr3:56704149-56704368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               493-672
               

               Cow position:
               chr3:84807166-84807350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               19, 156
               

               Conread position:
               493-691
               

               Cow position:
               chr3:11987488-11987288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               494-688
               

               Cow position:
               chr3:19006298-19006103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               18, 101
               

               Conread position:
               500-622
               

               Cow position:
               chr3:61171216-61171340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 11
               

               Conread position:
               500-674
               

               Cow position:
               chr3:28937455-28937629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               70, 21
               

               Conread position:
               504-657
               

               Cow position:
               chr3:83199657-83199504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               90, 7
               

               Conread position:
               504-668
               

               Cow position:
               chr3:65413130-65413296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               37, 7
               

               Conread position:
               504-689
               

               Cow position:
               chr3:44102111-44101929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               90, 7
               

               Conread position:
               505-673
               

               Cow position:
               chr3:58432302-58432468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               7, 39
               

               Conread position:
               510-688
               

               Cow position:
               chr3:38783747-38783568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               78, 38
               

               Conread position:
               511-648
               

               Cow position:
               chr3:35079367-35079506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               511-658
               

               Cow position:
               chr3:35582979-35582832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               77, 47
               

               Conread position:
               511-688
               

               Cow position:
               chr3:30026508-30026329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               511-693
               

               Cow position:
               chr3:54049891-54050076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               76, 53
               

               Conread position:
               511-694
               

               Cow position:
               chr3:72391226-72391038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               512-646
               

               Cow position:
               chr3:25060466-25060331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               49, 25
               

               Conread position:
               512-694
               

               Cow position:
               chr3:6690140-6689956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               521-694
               

               Cow position:
               chr3:28898091-28898267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               521-694
               

               Cow position:
               chr3:81470964-81471140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               36, 16
               

               Conread position:
               522-694
               

               Cow position:
               chr3:74900508-74900684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               11, 78
               

               Conread position:
               533-694
               

               Cow position:
               chr3:5366887-5366725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               61, 104
               

               Conread position:
               537-691
               

               Cow position:
               chr3:84157330-84157485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               54, 32
               

               Conread position:
               541-681
               

               Cow position:
               chr3:49790703-49790843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               53, 20
               

               Conread position:
               544-672
               

               Cow position:
               chr3:78201717-78201588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 52
               

               Conread position:
               544-689
               

               Cow position:
               chr3:59621540-59621687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               546-697
               

               Cow position:
               chr3:72503790-72503943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               559-689
               

               Cow position:
               chr3:68059407-68059276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 26
               

               Conread position:
               564-697
               

               Cow position:
               chr3:11292160-11292295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               35, 0
               
Show alignments to all cow chromosomes.
Conread position:	328-697
Cow position:	chr3:56678038-56678398 (view UCSC Genome Browser custom track)
Alignm length:	375
Alignm identity:	254
Alignm E-value:	4e-39
Alignm gaps (pig, cow):	5, 65
Conread position:	389-644
Cow position:	chr3:8147260-8147520 (view UCSC Genome Browser custom track)
Alignm length:	265
Alignm identity:	184
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	10, 45
Conread position:	404-687
Cow position:	chr3:175194-174911 (view UCSC Genome Browser custom track)
Alignm length:	292
Alignm identity:	191
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	27, 60
Conread position:	417-636
Cow position:	chr3:62998755-62998978 (view UCSC Genome Browser custom track)
Alignm length:	229
Alignm identity:	158
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	19, 163
Conread position:	431-686
Cow position:	chr3:71238370-71238118 (view UCSC Genome Browser custom track)
Alignm length:	261
Alignm identity:	185
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	79, 52
Conread position:	432-688
Cow position:	chr3:5149729-5149993 (view UCSC Genome Browser custom track)
Alignm length:	265
Alignm identity:	171
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	34, 0
Conread position:	436-686
Cow position:	chr3:81616232-81616490 (view UCSC Genome Browser custom track)
Alignm length:	259
Alignm identity:	173
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	9, 0
Conread position:	439-610
Cow position:	chr3:72626531-72626705 (view UCSC Genome Browser custom track)
Alignm length:	179
Alignm identity:	136
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	22, 16
Conread position:	443-632
Cow position:	chr3:42589308-42589116 (view UCSC Genome Browser custom track)
Alignm length:	195
Alignm identity:	147
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	14, 23
Conread position:	444-689
Cow position:	chr3:4120165-4120405 (view UCSC Genome Browser custom track)
Alignm length:	253
Alignm identity:	182
Alignm E-value:	5e-30
Alignm gaps (pig, cow):	71, 12
Conread position:	444-694
Cow position:	chr3:37041625-37041375 (view UCSC Genome Browser custom track)
Alignm length:	254
Alignm identity:	187
Alignm E-value:	6.00036e-42
Alignm gaps (pig, cow):	23, 7
Conread position:	447-696
Cow position:	chr3:24548623-24548883 (view UCSC Genome Browser custom track)
Alignm length:	261
Alignm identity:	172
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	35, 0
Conread position:	449-636
Cow position:	chr3:29234471-29234667 (view UCSC Genome Browser custom track)
Alignm length:	197
Alignm identity:	157
Alignm E-value:	4e-38
Alignm gaps (pig, cow):	17, 0
Conread position:	450-694
Cow position:	chr3:4319921-4319667 (view UCSC Genome Browser custom track)
Alignm length:	256
Alignm identity:	180
Alignm E-value:	5e-30
Alignm gaps (pig, cow):	62, 29
Conread position:	451-631
Cow position:	chr3:33460397-33460590 (view UCSC Genome Browser custom track)
Alignm length:	194
Alignm identity:	144
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	61, 0
Conread position:	451-689
Cow position:	chr3:20043393-20043631 (view UCSC Genome Browser custom track)
Alignm length:	243
Alignm identity:	171
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	32, 61
Conread position:	453-658
Cow position:	chr3:19044570-19044774 (view UCSC Genome Browser custom track)
Alignm length:	212
Alignm identity:	162
Alignm E-value:	3e-34
Alignm gaps (pig, cow):	52, 7
Conread position:	454-587
Cow position:	chr3:52147242-52147379 (view UCSC Genome Browser custom track)
Alignm length:	140
Alignm identity:	112
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	58, 77
Conread position:	454-622
Cow position:	chr3:19641269-19641087 (view UCSC Genome Browser custom track)
Alignm length:	183
Alignm identity:	137
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	8, 0
Conread position:	455-592
Cow position:	chr3:66563983-66563842 (view UCSC Genome Browser custom track)
Alignm length:	142
Alignm identity:	110
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	60, 0