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Cow genome map

           
Conread name:
           
Ova1-OVRM10184E10
        

               
Conread position:
               
403-689
               

               
Cow position:
               
chr6:21587122-21587405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 86
               

               
Conread position:
               
413-660
               

               
Cow position:
               
chr6:55015183-55014932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
22, 6
               

               
Conread position:
               
420-661
               

               
Cow position:
               
chr6:44566725-44566477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
5, 161
               

               
Conread position:
               
431-672
               

               
Cow position:
               
chr6:24491307-24491070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
52, 20
               

               
Conread position:
               
432-693
               

               
Cow position:
               
chr6:54365044-54365307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
29, 15
               

               
Conread position:
               
438-625
               

               
Cow position:
               
chr6:26072947-26073129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 21
               

               
Conread position:
               
439-691
               

               
Cow position:
               
chr6:46865305-46865569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
37, 78
               

               
Conread position:
               
439-694
               

               
Cow position:
               
chr6:32453668-32453405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
18, 164
               

               
Conread position:
               
448-687
               

               
Cow position:
               
chr6:7128136-7128376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
78, 13
               

               
Conread position:
               
451-619
               

               
Cow position:
               
chr6:29496262-29496088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
453-694
               

               
Cow position:
               
chr6:35726353-35726114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
59, 26
               

               
Conread position:
               
454-686
               

               
Cow position:
               
chr6:21235310-21235070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
454-697
               

               
Cow position:
               
chr6:37693007-37692768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
170, 40
               

               
Conread position:
               
455-622
               

               
Cow position:
               
chr6:26764560-26764735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
455-631
               

               
Cow position:
               
chr6:53732246-53732064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
57, 13
               

               
Conread position:
               
455-645
               

               
Cow position:
               
chr6:19052881-19052685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
455-671
               

               
Cow position:
               
chr6:22204761-22204984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
455-688
               

               
Cow position:
               
chr6:20157598-20157359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
29, 91
               

               
Conread position:
               
455-710
               

               
Cow position:
               
chr6:66260000-66259731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
456-622
               

               
Cow position:
               
chr6:57935315-57935480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
56, 105
               

               
Conread position:
               
456-661
               

               
Cow position:
               
chr6:26638651-26638440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 30
               

               
Conread position:
               
456-682
               

               
Cow position:
               
chr6:64432189-64431969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
137, 55
               

               
Conread position:
               
456-687
               

               
Cow position:
               
chr6:16700515-16700288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
52, 142
               

               
Conread position:
               
456-694
               

               
Cow position:
               
chr6:4691705-4691955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
456-694
               

               
Cow position:
               
chr6:14949227-14949461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
13, 73
               

               
Conread position:
               
456-707
               

               
Cow position:
               
chr6:26006025-26005771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
57, 22
               

               
Conread position:
               
457-687
               

               
Cow position:
               
chr6:2607869-2607631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
458-626
               

               
Cow position:
               
chr6:50444856-50445030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
458-694
               

               
Cow position:
               
chr6:32126311-32126076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 97
               

               
Conread position:
               
459-636
               

               
Cow position:
               
chr6:11637287-11637456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
135, 48
               

               
Conread position:
               
459-690
               

               
Cow position:
               
chr6:60819776-60819537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
27, 80
               

               
Conread position:
               
460-669
               

               
Cow position:
               
chr6:19225133-19225333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
23, 87
               

               
Conread position:
               
460-686
               

               
Cow position:
               
chr6:19696063-19695836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
50, 33
               

               
Conread position:
               
461-631
               

               
Cow position:
               
chr6:59687553-59687730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
462-633
               

               
Cow position:
               
chr6:5445923-5445748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
53, 111
               

               
Conread position:
               
462-694
               

               
Cow position:
               
chr6:38610228-38609988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
50, 17
               

               
Conread position:
               
463-604
               

               
Cow position:
               
chr6:65831617-65831471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
466-622
               

               
Cow position:
               
chr6:55945706-55945871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
466-632
               

               
Cow position:
               
chr6:24651732-24651900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
466-639
               

               
Cow position:
               
chr6:57320347-57320522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 94
               

               
Conread position:
               
467-656
               

               
Cow position:
               
chr6:57467851-57467654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
467-657
               

               
Cow position:
               
chr6:66329453-66329646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 104
               

               
Conread position:
               
467-672
               

               
Cow position:
               
chr6:57072673-57072464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
468-587
               

               
Cow position:
               
chr6:16738864-16738741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
468-622
               

               
Cow position:
               
chr6:54828071-54828230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
468-632
               

               
Cow position:
               
chr6:4048901-4049071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
468-646
               

               
Cow position:
               
chr6:31846993-31847173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
17, 82
               

               
Conread position:
               
468-646
               

               
Cow position:
               
chr6:55919682-55919867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
468-657
               

               
Cow position:
               
chr6:51543152-51542955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 151
               

               
Conread position:
               
468-657
               

               
Cow position:
               
chr6:68594238-68594042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
468-658
               

               
Cow position:
               
chr6:28561919-28562113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
47, 116
               

               
Conread position:
               
468-663
               

               
Cow position:
               
chr6:35984885-35985086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
468-668
               

               
Cow position:
               
chr6:8186938-8187144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
468-671
               

               
Cow position:
               
chr6:13742236-13742031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
47, 105
               

               
Conread position:
               
468-671
               

               
Cow position:
               
chr6:19563228-19563441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
468-672
               

               
Cow position:
               
chr6:15058625-15058418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
468-672
               

               
Cow position:
               
chr6:45920971-45921172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 79
               

               
Conread position:
               
468-672
               

               
Cow position:
               
chr6:59015330-59015528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 77
               

               
Conread position:
               
468-673
               

               
Cow position:
               
chr6:67633311-67633519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
47, 150
               

               
Conread position:
               
468-682
               

               
Cow position:
               
chr6:34475309-34475529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
31, 83
               

               
Conread position:
               
468-687
               

               
Cow position:
               
chr6:1941585-1941806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
45, 94
               

               
Conread position:
               
468-687
               

               
Cow position:
               
chr6:24468150-24468369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
126, 45
               

               
Conread position:
               
468-688
               

               
Cow position:
               
chr6:29240181-29239967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
37, 76
               

               
Conread position:
               
468-688
               

               
Cow position:
               
chr6:48097354-48097578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 77
               

               
Conread position:
               
468-688
               

               
Cow position:
               
chr6:50467388-50467161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
14, 186
               

               
Conread position:
               
468-689
               

               
Cow position:
               
chr6:581491-581721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
44, 111
               

               
Conread position:
               
468-689
               

               
Cow position:
               
chr6:12928391-12928171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 79
               

               
Conread position:
               
468-689
               

               
Cow position:
               
chr6:30501874-30502099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
15, 188
               

               
Conread position:
               
468-689
               

               
Cow position:
               
chr6:53145431-53145658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
468-689
               

               
Cow position:
               
chr6:66839442-66839223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
46, 93
               

               
Conread position:
               
468-691
               

               
Cow position:
               
chr6:22850002-22850232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
468-691
               

               
Cow position:
               
chr6:23024847-23025082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
468-692
               

               
Cow position:
               
chr6:1866980-1866754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
45, 81
               

               
Conread position:
               
468-692
               

               
Cow position:
               
chr6:21470183-21470407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
126, 45
               

               
Conread position:
               
468-692
               

               
Cow position:
               
chr6:55030584-55030345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
468-692
               

               
Cow position:
               
chr6:56799643-56799877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
468-692
               

               
Cow position:
               
chr6:69374585-69374811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
44, 136
               

               
Conread position:
               
468-693
               

               
Cow position:
               
chr6:28972784-28973015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 112
               

               
Conread position:
               
468-694
               

               
Cow position:
               
chr6:4559054-4559284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 150
               

               
Conread position:
               
468-694
               

               
Cow position:
               
chr6:10039977-10039743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
468-694
               

               
Cow position:
               
chr6:19996864-19996636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
47, 103
               

               
Conread position:
               
468-694
               

               
Cow position:
               
chr6:43134691-43134919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
13, 32
               

               
Conread position:
               
468-694
               

               
Cow position:
               
chr6:50984469-50984242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
17, 34
               

               
Conread position:
               
468-694
               

               
Cow position:
               
chr6:58304661-58304434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
126, 99
               

               
Conread position:
               
468-694
               

               
Cow position:
               
chr6:63066086-63065846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
468-699
               

               
Cow position:
               
chr6:12669349-12669115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
15, 122
               

               
Conread position:
               
468-699
               

               
Cow position:
               
chr6:62370938-62371162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
44, 72
               

               
Conread position:
               
468-699
               

               
Cow position:
               
chr6:68376066-68376307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 67
               

               
Conread position:
               
469-699
               

               
Cow position:
               
chr6:16287818-16288043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 88
               

               
Conread position:
               
469-703
               

               
Cow position:
               
chr6:55296844-55297084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
470-630
               

               
Cow position:
               
chr6:3937034-3936866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
470-687
               

               
Cow position:
               
chr6:6227256-6227033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
470-699
               

               
Cow position:
               
chr6:5609195-5609430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
43, 106
               

               
Conread position:
               
470-699
               

               
Cow position:
               
chr6:17794507-17794749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
471-657
               

               
Cow position:
               
chr6:57300016-57299815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
471-677
               

               
Cow position:
               
chr6:54821080-54820867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
472-612
               

               
Cow position:
               
chr6:57143449-57143594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
472-631
               

               
Cow position:
               
chr6:45471341-45471507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
472-684
               

               
Cow position:
               
chr6:18608565-18608781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
40, 211
               

               
Conread position:
               
472-685
               

               
Cow position:
               
chr6:9302478-9302688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
122, 41
               

               
Conread position:
               
472-689
               

               
Cow position:
               
chr6:13510417-13510198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 52
               

               
Conread position:
               
473-622
               

               
Cow position:
               
chr6:13097153-13097308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
11, 104
               

               
Conread position:
               
473-641
               

               
Cow position:
               
chr6:29265876-29266059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
473-665
               

               
Cow position:
               
chr6:632999-633204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
473-688
               

               
Cow position:
               
chr6:3952765-3952544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
473-699
               

               
Cow position:
               
chr6:18080272-18080500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
42, 91
               

               
Conread position:
               
474-631
               

               
Cow position:
               
chr6:56581811-56581976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
474-658
               

               
Cow position:
               
chr6:34076406-34076217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
474-688
               

               
Cow position:
               
chr6:46462137-46462356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
474-688
               

               
Cow position:
               
chr6:54846031-54846253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
474-691
               

               
Cow position:
               
chr6:24339532-24339305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 109
               

               
Conread position:
               
474-694
               

               
Cow position:
               
chr6:12965097-12964872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
474-694
               

               
Cow position:
               
chr6:37395158-37395381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 76
               

               
Conread position:
               
474-694
               

               
Cow position:
               
chr6:51529945-51530170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
474-694
               

               
Cow position:
               
chr6:56986405-56986628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
32, 184
               

               
Conread position:
               
474-694
               

               
Cow position:
               
chr6:57079669-57079443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
474-694
               

               
Cow position:
               
chr6:59104847-59104619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
475-688
               

               
Cow position:
               
chr6:42567738-42567518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
475-689
               

               
Cow position:
               
chr6:63251679-63251898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
40, 99
               

               
Conread position:
               
475-694
               

               
Cow position:
               
chr6:62437659-62437434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
476-622
               

               
Cow position:
               
chr6:37827706-37827854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
39, 113
               

               
Conread position:
               
476-648
               

               
Cow position:
               
chr6:24903334-24903511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 175
               

               
Conread position:
               
476-658
               

               
Cow position:
               
chr6:17404804-17404616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 157
               

               
Conread position:
               
476-687
               

               
Cow position:
               
chr6:21004921-21004701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
476-687
               

               
Cow position:
               
chr6:28148505-28148281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
36, 132
               

               
Conread position:
               
476-691
               

               
Cow position:
               
chr6:35728090-35727866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
476-692
               

               
Cow position:
               
chr6:46466058-46465843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
476-694
               

               
Cow position:
               
chr6:62670112-62669885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
476-699
               

               
Cow position:
               
chr6:47959046-47958830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
112, 77
               

               
Conread position:
               
477-689
               

               
Cow position:
               
chr6:27239764-27239981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
38, 78
               

               
Conread position:
               
477-694
               

               
Cow position:
               
chr6:7801159-7801372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
5, 35
               

               
Conread position:
               
477-694
               

               
Cow position:
               
chr6:33150054-33150272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
28, 87
               

               
Conread position:
               
478-607
               

               
Cow position:
               
chr6:31887869-31887740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
116, 34
               

               
Conread position:
               
479-622
               

               
Cow position:
               
chr6:15111597-15111749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
479-622
               

               
Cow position:
               
chr6:36891884-36891744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
74, 29
               

               
Conread position:
               
479-622
               

               
Cow position:
               
chr6:66058471-66058615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
57, 36
               

               
Conread position:
               
479-628
               

               
Cow position:
               
chr6:12099452-12099601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 66
               

               
Conread position:
               
479-631
               

               
Cow position:
               
chr6:16137529-16137688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
479-631
               

               
Cow position:
               
chr6:30122929-30123087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
479-631
               

               
Cow position:
               
chr6:34224312-34224161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
103, 32
               

               
Conread position:
               
479-631
               

               
Cow position:
               
chr6:36808964-36809122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 97
               

               
Conread position:
               
479-631
               

               
Cow position:
               
chr6:47790560-47790717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
36, 96
               

               
Conread position:
               
479-633
               

               
Cow position:
               
chr6:16627967-16627815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 61
               

               
Conread position:
               
479-633
               

               
Cow position:
               
chr6:21175572-21175418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
33, 66
               

               
Conread position:
               
479-636
               

               
Cow position:
               
chr6:34463352-34463510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
479-641
               

               
Cow position:
               
chr6:19936330-19936497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
479-645
               

               
Cow position:
               
chr6:54679770-54679596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
479-646
               

               
Cow position:
               
chr6:1173709-1173889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
479-646
               

               
Cow position:
               
chr6:47540602-47540775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
479-646
               

               
Cow position:
               
chr6:68246593-68246766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
479-655
               

               
Cow position:
               
chr6:18776484-18776309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
33, 131
               

               
Conread position:
               
479-658
               

               
Cow position:
               
chr6:21052208-21052394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
479-658
               

               
Cow position:
               
chr6:66293721-66293540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
479-662
               

               
Cow position:
               
chr6:62805883-62805694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
479-664
               

               
Cow position:
               
chr6:26054662-26054855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
479-664
               

               
Cow position:
               
chr6:45159817-45160008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
479-665
               

               
Cow position:
               
chr6:33302634-33302444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
479-669
               

               
Cow position:
               
chr6:50883441-50883633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 8
               

               
Conread position:
               
479-669
               

               
Cow position:
               
chr6:53346204-53346019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
115, 37
               

               
Conread position:
               
479-670
               

               
Cow position:
               
chr6:8369662-8369468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 160
               

               
Conread position:
               
479-670
               

               
Cow position:
               
chr6:26408264-26408461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
479-671
               

               
Cow position:
               
chr6:36225348-36225151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
36, 94
               

               
Conread position:
               
479-671
               

               
Cow position:
               
chr6:47151056-47150861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
479-671
               

               
Cow position:
               
chr6:67574628-67574431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
479-672
               

               
Cow position:
               
chr6:1103507-1103697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
145, 32
               

               
Conread position:
               
479-672
               

               
Cow position:
               
chr6:29852817-29853023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
30, 181
               

               
Conread position:
               
479-672
               

               
Cow position:
               
chr6:34569654-34569449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 115
               

               
Conread position:
               
479-676
               

               
Cow position:
               
chr6:49686058-49685856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
29, 168
               

               
Conread position:
               
479-681
               

               
Cow position:
               
chr6:24776376-24776171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
24, 91
               

               
Conread position:
               
479-681
               

               
Cow position:
               
chr6:53024573-53024771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 76
               

               
Conread position:
               
479-685
               

               
Cow position:
               
chr6:33510027-33509818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
36, 165
               

               
Conread position:
               
479-687
               

               
Cow position:
               
chr6:46558292-46558084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
36, 76
               

               
Conread position:
               
479-688
               

               
Cow position:
               
chr6:14913996-14914209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
30, 47
               

               
Conread position:
               
479-689
               

               
Cow position:
               
chr6:16765160-16765371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
35, 133
               

               
Conread position:
               
479-689
               

               
Cow position:
               
chr6:35318895-35319109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
30, 86
               

               
Conread position:
               
479-689
               

               
Cow position:
               
chr6:42483653-42483440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
36, 101
               

               
Conread position:
               
479-689
               

               
Cow position:
               
chr6:50090883-50090667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
479-689
               

               
Cow position:
               
chr6:54831716-54831501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 100
               

               
Conread position:
               
479-691
               

               
Cow position:
               
chr6:6063054-6063271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
30, 92
               

               
Conread position:
               
479-691
               

               
Cow position:
               
chr6:49421558-49421765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 46
               

               
Conread position:
               
479-692
               

               
Cow position:
               
chr6:10105745-10105957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
34, 66
               

               
Conread position:
               
479-694
               

               
Cow position:
               
chr6:8600243-8600020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
35, 162
               

               
Conread position:
               
479-694
               

               
Cow position:
               
chr6:15300602-15300809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
33, 76
               

               
Conread position:
               
479-694
               

               
Cow position:
               
chr6:17313976-17313755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
36, 138
               

               
Conread position:
               
479-694
               

               
Cow position:
               
chr6:42035008-42034792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
36, 69
               

               
Conread position:
               
479-694
               

               
Cow position:
               
chr6:53138700-53138918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 63
               

               
Conread position:
               
479-694
               

               
Cow position:
               
chr6:58725605-58725390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
34, 75
               

               
Conread position:
               
479-694
               

               
Cow position:
               
chr6:61631370-61631589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
34, 103
               

               
Conread position:
               
479-697
               

               
Cow position:
               
chr6:35171852-35171622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 91
               

               
Conread position:
               
479-699
               

               
Cow position:
               
chr6:53546267-53546050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 34
               

               
Conread position:
               
479-705
               

               
Cow position:
               
chr6:36643249-36643482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
36, 163
               

               
Conread position:
               
480-586
               

               
Cow position:
               
chr6:36267237-36267126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
480-664
               

               
Cow position:
               
chr6:34721874-34722055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
34, 69
               

               
Conread position:
               
480-687
               

               
Cow position:
               
chr6:5330651-5330439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
34, 109
               

               
Conread position:
               
480-691
               

               
Cow position:
               
chr6:44867309-44867520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
40, 86
               

               
Conread position:
               
480-691
               

               
Cow position:
               
chr6:57115315-57115098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
108, 21
               

               
Conread position:
               
480-694
               

               
Cow position:
               
chr6:41014737-41014959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
480-694
               

               
Cow position:
               
chr6:47246019-47245801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
481-619
               

               
Cow position:
               
chr6:49824856-49824998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 98
               

               
Conread position:
               
481-621
               

               
Cow position:
               
chr6:31928875-31928730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
481-631
               

               
Cow position:
               
chr6:14152655-14152808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
31, 41
               

               
Conread position:
               
481-631
               

               
Cow position:
               
chr6:44474798-44474642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
481-633
               

               
Cow position:
               
chr6:62224657-62224502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
481-636
               

               
Cow position:
               
chr6:16411849-16411688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
481-636
               

               
Cow position:
               
chr6:54840264-54840430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
481-639
               

               
Cow position:
               
chr6:59101083-59101247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
481-645
               

               
Cow position:
               
chr6:18440242-18440409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
481-645
               

               
Cow position:
               
chr6:58697393-58697563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
481-646
               

               
Cow position:
               
chr6:14150145-14150312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
481-666
               

               
Cow position:
               
chr6:27636550-27636362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
481-667
               

               
Cow position:
               
chr6:44543911-44544101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
34, 90
               

               
Conread position:
               
481-670
               

               
Cow position:
               
chr6:43906445-43906637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
34, 175
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr6:5095306-5095500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
481-672
               

               
Cow position:
               
chr6:15587356-15587553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
481-673
               

               
Cow position:
               
chr6:55044405-55044601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 171
               

               
Conread position:
               
481-676
               

               
Cow position:
               
chr6:56061899-56061698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
481-679
               

               
Cow position:
               
chr6:8468895-8468700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
114, 31
               

               
Conread position:
               
481-682
               

               
Cow position:
               
chr6:16380784-16380576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
481-682
               

               
Cow position:
               
chr6:53932609-53932817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
21, 98
               

               
Conread position:
               
481-686
               

               
Cow position:
               
chr6:35181018-35181229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
481-686
               

               
Cow position:
               
chr6:66947584-66947790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 77
               

               
Conread position:
               
481-687
               

               
Cow position:
               
chr6:6201669-6201451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
481-687
               

               
Cow position:
               
chr6:37246203-37246414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
32, 141
               

               
Conread position:
               
481-688
               

               
Cow position:
               
chr6:3596030-3595817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
481-688
               

               
Cow position:
               
chr6:4144878-4144667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
481-688
               

               
Cow position:
               
chr6:8562950-8562748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
28, 24
               

               
Conread position:
               
481-688
               

               
Cow position:
               
chr6:14056232-14056444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
481-688
               

               
Cow position:
               
chr6:18447279-18447490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
34, 158
               

               
Conread position:
               
481-688
               

               
Cow position:
               
chr6:24110520-24110308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
31, 172
               

               
Conread position:
               
481-688
               

               
Cow position:
               
chr6:24536290-24536506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
34, 86
               

               
Conread position:
               
481-688
               

               
Cow position:
               
chr6:28852212-28851999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
481-688
               

               
Cow position:
               
chr6:32044086-32043873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
481-688
               

               
Cow position:
               
chr6:42728882-42728671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
27, 43
               

               
Conread position:
               
481-688
               

               
Cow position:
               
chr6:48988670-48988456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
481-688
               

               
Cow position:
               
chr6:50269446-50269657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
32, 94
               

               
Conread position:
               
481-688
               

               
Cow position:
               
chr6:54849167-54848954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
481-688
               

               
Cow position:
               
chr6:55545936-55546149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
481-688
               

               
Cow position:
               
chr6:56022316-56022523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
32, 171
               

               
Conread position:
               
481-688
               

               
Cow position:
               
chr6:59620892-59620680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 199
               

               
Conread position:
               
481-688
               

               
Cow position:
               
chr6:67728614-67728401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
481-691
               

               
Cow position:
               
chr6:8366050-8365834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
481-692
               

               
Cow position:
               
chr6:44194320-44194527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
28, 71
               

               
Conread position:
               
481-694
               

               
Cow position:
               
chr6:10176063-10176282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
481-694
               

               
Cow position:
               
chr6:20219543-20219756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
32, 49
               

               
Conread position:
               
481-694
               

               
Cow position:
               
chr6:27888579-27888371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
24, 31
               

               
Conread position:
               
481-694
               

               
Cow position:
               
chr6:40032415-40032211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
112, 34
               

               
Conread position:
               
481-694
               

               
Cow position:
               
chr6:47779114-47778895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
481-694
               

               
Cow position:
               
chr6:66434190-66433970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
34, 160
               

               
Conread position:
               
481-697
               

               
Cow position:
               
chr6:21399518-21399739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
481-697
               

               
Cow position:
               
chr6:64428958-64429179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
481-699
               

               
Cow position:
               
chr6:21475961-21475742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
30, 75
               

               
Conread position:
               
481-699
               

               
Cow position:
               
chr6:62929734-62929511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
32, 207
               

               
Conread position:
               
481-710
               

               
Cow position:
               
chr6:28088811-28089044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 62
               

               
Conread position:
               
482-668
               

               
Cow position:
               
chr6:60778004-60777813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
31, 86
               

               
Conread position:
               
482-671
               

               
Cow position:
               
chr6:60852398-60852601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
482-672
               

               
Cow position:
               
chr6:19754844-19755039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
23, 6
               

               
Conread position:
               
482-672
               

               
Cow position:
               
chr6:61514963-61515146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
111, 34
               

               
Conread position:
               
482-685
               

               
Cow position:
               
chr6:48436065-48435863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 99
               

               
Conread position:
               
482-687
               

               
Cow position:
               
chr6:15937617-15937828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
482-688
               

               
Cow position:
               
chr6:5844933-5845145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
482-688
               

               
Cow position:
               
chr6:17816760-17816970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
482-694
               

               
Cow position:
               
chr6:37149417-37149209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 17
               

               
Conread position:
               
482-697
               

               
Cow position:
               
chr6:43787673-43787894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
482-697
               

               
Cow position:
               
chr6:67282117-67281912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
111, 28
               

               
Conread position:
               
483-622
               

               
Cow position:
               
chr6:16016269-16016126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 100
               

               
Conread position:
               
483-687
               

               
Cow position:
               
chr6:61883939-61884140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
31, 95
               

               
Conread position:
               
483-688
               

               
Cow position:
               
chr6:19045862-19045648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
483-688
               

               
Cow position:
               
chr6:47783101-47782887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
483-688
               

               
Cow position:
               
chr6:50863181-50862968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
483-688
               

               
Cow position:
               
chr6:68644227-68644015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
483-694
               

               
Cow position:
               
chr6:67187912-67187703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
29, 62
               

               
Conread position:
               
483-697
               

               
Cow position:
               
chr6:43345206-43345425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
30, 83
               

               
Conread position:
               
483-697
               

               
Cow position:
               
chr6:47648000-47648219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
483-700
               

               
Cow position:
               
chr6:1090817-1090596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
30, 213
               

               
Conread position:
               
484-672
               

               
Cow position:
               
chr6:6060341-6060530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
82, 60
               

               
Conread position:
               
484-688
               

               
Cow position:
               
chr6:41169300-41169510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
484-692
               

               
Cow position:
               
chr6:48010291-48010501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 157
               

               
Conread position:
               
484-699
               

               
Cow position:
               
chr6:19446486-19446268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
31, 148
               

               
Conread position:
               
486-665
               

               
Cow position:
               
chr6:69153637-69153458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
108, 10
               

               
Conread position:
               
486-688
               

               
Cow position:
               
chr6:41376001-41375798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
29, 77
               

               
Conread position:
               
487-669
               

               
Cow position:
               
chr6:30983744-30983564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
22, 46
               

               
Conread position:
               
487-671
               

               
Cow position:
               
chr6:15974293-15974477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
28, 68
               

               
Conread position:
               
487-694
               

               
Cow position:
               
chr6:48379381-48379594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
489-686
               

               
Cow position:
               
chr6:15446965-15447170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
489-694
               

               
Cow position:
               
chr6:8731647-8731428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
490-672
               

               
Cow position:
               
chr6:14471592-14471401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
490-685
               

               
Cow position:
               
chr6:61644629-61644826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
25, 166
               

               
Conread position:
               
491-687
               

               
Cow position:
               
chr6:48469233-48469027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
14, 20
               

               
Conread position:
               
491-694
               

               
Cow position:
               
chr6:2585167-2584962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
492-691
               

               
Cow position:
               
chr6:61681303-61681100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
23, 79
               

               
Conread position:
               
492-694
               

               
Cow position:
               
chr6:12091761-12091973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
492-694
               

               
Cow position:
               
chr6:47305567-47305361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
23, 95
               

               
Conread position:
               
492-696
               

               
Cow position:
               
chr6:51835623-51835418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
494-646
               

               
Cow position:
               
chr6:33290191-33290036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
494-686
               

               
Cow position:
               
chr6:21467046-21467236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
99, 146
               

               
Conread position:
               
495-672
               

               
Cow position:
               
chr6:52025145-52025330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
495-682
               

               
Cow position:
               
chr6:57295954-57295761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
496-694
               

               
Cow position:
               
chr6:28483238-28483035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
500-694
               

               
Cow position:
               
chr6:21514392-21514588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
6, 31
               

               
Conread position:
               
504-657
               

               
Cow position:
               
chr6:30895782-30895935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
90, 7
               

               
Conread position:
               
504-665
               

               
Cow position:
               
chr6:17173036-17172873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 6
               

               
Conread position:
               
504-685
               

               
Cow position:
               
chr6:65534960-65535142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
89, 7
               

               
Conread position:
               
504-694
               

               
Cow position:
               
chr6:8125537-8125346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
90, 8
               

               
Conread position:
               
504-694
               

               
Cow position:
               
chr6:22525534-22525350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
91, 6
               

               
Conread position:
               
505-646
               

               
Cow position:
               
chr6:39356323-39356181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
510-681
               

               
Cow position:
               
chr6:67323509-67323342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
78, 32
               

               
Conread position:
               
510-689
               

               
Cow position:
               
chr6:59631715-59631903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
511-645
               

               
Cow position:
               
chr6:14263687-14263822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
78, 60
               

               
Conread position:
               
511-688
               

               
Cow position:
               
chr6:51666133-51666311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
77, 134
               

               
Conread position:
               
511-688
               

               
Cow position:
               
chr6:60121394-60121574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
511-691
               

               
Cow position:
               
chr6:36189902-36189721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
82, 137
               

               
Conread position:
               
512-689
               

               
Cow position:
               
chr6:2153395-2153574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
512-709
               

               
Cow position:
               
chr6:31865295-31865103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
75, 9
               

               
Conread position:
               
513-699
               

               
Cow position:
               
chr6:52413062-52412876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
75, 152
               

               
Conread position:
               
515-694
               

               
Cow position:
               
chr6:55502971-55502786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
519-671
               

               
Cow position:
               
chr6:58076590-58076436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
521-694
               

               
Cow position:
               
chr6:21590897-21590727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 23
               

               
Conread position:
               
540-686
               

               
Cow position:
               
chr6:60451600-60451455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
53, 18
               

               
Conread position:
               
540-694
               

               
Cow position:
               
chr6:67456894-67456738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
545-669
               

               
Cow position:
               
chr6:16738530-16738405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 24
               

               
Conread position:
               
545-671
               

               
Cow position:
               
chr6:62478699-62478827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
545-694
               

               
Cow position:
               
chr6:23611108-23610962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
49, 64
               

               
Conread position:
               
547-692
               

               
Cow position:
               
chr6:16316485-16316335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
556-701
               

               
Cow position:
               
chr6:46841366-46841513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               
Show alignments to all cow chromosomes.