Cow genome map
| Conread name: | Ova1-OVRM10186H11 |
| Conread position: | 1-316 |
| Cow position: | chr1:30035050-30034748 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1-317 |
| Cow position: | chr1:38418257-38417942 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 1-320 |
| Cow position: | chr1:71792365-71792040 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 74 |
| Conread position: | 1-324 |
| Cow position: | chr1:97431737-97431423 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 135, 58 |
| Conread position: | 316-673 |
| Cow position: | chr1:72063497-72063135 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 118, 140 |
| Conread position: | 319-673 |
| Cow position: | chr1:40515019-40514666 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 134, 10 |
| Conread position: | 330-666 |
| Cow position: | chr1:45096147-45096488 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 112, 90 |
| Conread position: | 331-494 |
| Cow position: | chr1:8400358-8400194 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 331-577 |
| Cow position: | chr1:40947595-40947844 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 331-620 |
| Cow position: | chr1:72655273-72655559 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 92, 38 |
| Conread position: | 331-620 |
| Cow position: | chr1:89811538-89811254 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 92, 151 |
| Conread position: | 331-620 |
| Cow position: | chr1:101859885-101859601 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 111, 11 |
| Conread position: | 331-634 |
| Cow position: | chr1:97070686-97070376 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 17, 27 |
| Conread position: | 331-664 |
| Cow position: | chr1:88633922-88634266 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 331-664 |
| Cow position: | chr1:89901160-89900814 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 12, 290 |
| Conread position: | 331-666 |
| Cow position: | chr1:6945365-6945710 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 86, 41 |
| Conread position: | 331-672 |
| Cow position: | chr1:51650621-51650969 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 39 |
| Conread position: | 331-674 |
| Cow position: | chr1:62855273-62854925 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 58, 94 |
| Conread position: | 331-676 |
| Cow position: | chr1:89741721-89741386 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 93, 145 |
| Conread position: | 332-516 |
| Cow position: | chr1:44232702-44232889 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 333-664 |
| Cow position: | chr1:30032757-30033089 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 235 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 83, 169 |
| Conread position: | 334-674 |
| Cow position: | chr1:67901446-67901102 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 109 |
| Conread position: | 338-508 |
| Cow position: | chr1:44955613-44955442 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 343-548 |
| Cow position: | chr1:61165339-61165545 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 74, 135 |
| Conread position: | 343-551 |
| Cow position: | chr1:87519085-87518872 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 343-581 |
| Cow position: | chr1:38389243-38389012 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 180 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 171, 22 |
| Conread position: | 343-674 |
| Cow position: | chr1:18407593-18407253 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 103, 76 |
| Conread position: | 344-620 |
| Cow position: | chr1:89841192-89841464 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 96, 62 |
| Conread position: | 369-674 |
| Cow position: | chr1:69534824-69535140 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 47, 111 |
| Conread position: | 371-674 |
| Cow position: | chr1:28721385-28721695 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 49, 136 |
| Conread position: | 372-620 |
| Cow position: | chr1:28802845-28802598 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 141, 48 |
| Conread position: | 373-634 |
| Cow position: | chr1:13644305-13644571 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 47, 246 |
| Conread position: | 373-674 |
| Cow position: | chr1:33710652-33710949 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 44, 148 |
| Conread position: | 378-635 |
| Cow position: | chr1:55324978-55324722 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 34, 64 |
| Conread position: | 388-634 |
| Cow position: | chr1:79885927-79885676 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 39 |
| Conread position: | 414-620 |
| Cow position: | chr1:100977369-100977165 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 99, 31 |
| Conread position: | 446-672 |
| Cow position: | chr1:52322112-52322352 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
Show alignments to all cow chromosomes.