Cow genome map
| Conread name: | Ova1-OVRM10186H11 |
| Conread position: | 1-154 |
| Cow position: | chr11:48658829-48658678 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 1-174 |
| Cow position: | chr11:70602184-70602352 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 147 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 127, 87 |
| Conread position: | 1-226 |
| Cow position: | chr11:21853152-21853378 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 88 |
| Conread position: | 297-675 |
| Cow position: | chr11:24676181-24676561 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 40 |
| Conread position: | 308-669 |
| Cow position: | chr11:13499063-13499436 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 134, 77 |
| Conread position: | 318-620 |
| Cow position: | chr11:37493381-37493085 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 102, 24 |
| Conread position: | 331-491 |
| Cow position: | chr11:21851941-21851785 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 19 |
| Conread position: | 331-492 |
| Cow position: | chr11:20331669-20331831 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 85, 123 |
| Conread position: | 331-501 |
| Cow position: | chr11:61504042-61504214 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 331-505 |
| Cow position: | chr11:40048035-40047859 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 331-595 |
| Cow position: | chr11:56178668-56178925 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 91, 60 |
| Conread position: | 331-607 |
| Cow position: | chr11:31932650-31932929 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 331-613 |
| Cow position: | chr11:15995920-15996201 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 111, 77 |
| Conread position: | 331-620 |
| Cow position: | chr11:75131694-75131976 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 89, 26 |
| Conread position: | 331-626 |
| Cow position: | chr11:72975812-72976102 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 31, 43 |
| Conread position: | 331-634 |
| Cow position: | chr11:75323900-75324210 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 331-674 |
| Cow position: | chr11:62406723-62406369 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 89, 288 |
| Conread position: | 343-620 |
| Cow position: | chr11:75918802-75919081 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 77, 275 |
| Conread position: | 345-535 |
| Cow position: | chr11:34019151-34019345 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 357-613 |
| Cow position: | chr11:35963599-35963349 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 65, 116 |
| Conread position: | 382-674 |
| Cow position: | chr11:52461309-52461598 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 22, 92 |
| Conread position: | 410-620 |
| Cow position: | chr11:77778947-77778738 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 15, 31 |
| Conread position: | 421-620 |
| Cow position: | chr11:21463376-21463579 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 146 |
| Conread position: | 429-674 |
| Cow position: | chr11:7111697-7111950 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 82, 13 |
| Conread position: | 433-674 |
| Cow position: | chr11:7393009-7393249 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 61, 33 |
Show alignments to all cow chromosomes.