Cow genome map
| Conread name: | Ova1-OVRM10186H11 |
| Conread position: | 1-199 |
| Cow position: | chr2:21407406-21407207 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 88 |
| Conread position: | 299-674 |
| Cow position: | chr2:54692800-54693183 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 269 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 18, 31 |
| Conread position: | 304-686 |
| Cow position: | chr2:14559149-14559532 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 273 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 111, 39 |
| Conread position: | 307-674 |
| Cow position: | chr2:1492383-1492023 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 203, 25 |
| Conread position: | 323-620 |
| Cow position: | chr2:2362240-2362545 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 76, 11 |
| Conread position: | 330-677 |
| Cow position: | chr2:16283971-16284325 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 90, 5 |
| Conread position: | 331-501 |
| Cow position: | chr2:69223998-69224171 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 331-590 |
| Cow position: | chr2:52155985-52155724 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 76, 150 |
| Conread position: | 331-606 |
| Cow position: | chr2:24395163-24394890 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 26, 66 |
| Conread position: | 331-611 |
| Cow position: | chr2:36562468-36562753 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 22, 197 |
| Conread position: | 331-613 |
| Cow position: | chr2:52654006-52654283 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 112, 79 |
| Conread position: | 331-620 |
| Cow position: | chr2:10845308-10845020 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 28, 22 |
| Conread position: | 331-620 |
| Cow position: | chr2:45923128-45922835 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 85, 39 |
| Conread position: | 331-620 |
| Cow position: | chr2:46944567-46944853 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 43, 34 |
| Conread position: | 331-620 |
| Cow position: | chr2:56158475-56158184 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 89, 26 |
| Conread position: | 331-620 |
| Cow position: | chr2:85360066-85359781 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 86, 125 |
| Conread position: | 331-623 |
| Cow position: | chr2:40243889-40244186 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 331-674 |
| Cow position: | chr2:17730587-17730253 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 91, 112 |
| Conread position: | 331-674 |
| Cow position: | chr2:52630264-52629920 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 24, 54 |
| Conread position: | 331-675 |
| Cow position: | chr2:7900023-7900377 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 325 |
| Conread position: | 332-620 |
| Cow position: | chr2:82164171-82164458 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 88, 38 |
| Conread position: | 343-579 |
| Cow position: | chr2:28718467-28718243 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 171, 32 |
| Conread position: | 343-623 |
| Cow position: | chr2:5482566-5482285 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 77, 130 |
| Conread position: | 343-674 |
| Cow position: | chr2:15580008-15579667 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 236 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 28, 19 |
| Conread position: | 343-674 |
| Cow position: | chr2:28622621-28622279 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 46, 14 |
| Conread position: | 343-674 |
| Cow position: | chr2:44167456-44167118 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 79, 130 |
| Conread position: | 344-551 |
| Cow position: | chr2:49596797-49597002 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 73, 21 |
| Conread position: | 356-601 |
| Cow position: | chr2:11728179-11728422 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 105, 129 |
| Conread position: | 356-607 |
| Cow position: | chr2:6126793-6127037 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 35 |
| Conread position: | 358-657 |
| Cow position: | chr2:6876506-6876819 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 65, 119 |
| Conread position: | 368-672 |
| Cow position: | chr2:25242969-25243281 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 94, 76 |
| Conread position: | 373-606 |
| Cow position: | chr2:80515212-80515436 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 47, 70 |
| Conread position: | 373-612 |
| Cow position: | chr2:41170538-41170774 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 44, 124 |
| Conread position: | 373-674 |
| Cow position: | chr2:11971115-11970811 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 43, 100 |
| Conread position: | 375-686 |
| Cow position: | chr2:5897060-5897375 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 45, 136 |
| Conread position: | 378-674 |
| Cow position: | chr2:1685429-1685728 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 64, 42 |
| Conread position: | 382-666 |
| Cow position: | chr2:41148102-41148398 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 29, 56 |
| Conread position: | 415-613 |
| Cow position: | chr2:31707639-31707443 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 70, 49 |
Show alignments to all cow chromosomes.