Cow genome map
| Conread name: | Ova1-OVRM10186H11 |
| Conread position: | 1-129 |
| Cow position: | chr3:61538913-61538792 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-252 |
| Cow position: | chr3:13117748-13117991 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 1-337 |
| Cow position: | chr3:41654854-41654517 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 83, 108 |
| Conread position: | 324-686 |
| Cow position: | chr3:64359954-64359584 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 252 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 119, 38 |
| Conread position: | 331-576 |
| Cow position: | chr3:25681834-25681582 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 331-613 |
| Cow position: | chr3:66117768-66118053 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 331-620 |
| Cow position: | chr3:2651531-2651825 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 41, 34 |
| Conread position: | 331-634 |
| Cow position: | chr3:66636479-66636783 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 89, 38 |
| Conread position: | 331-636 |
| Cow position: | chr3:70085577-70085269 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 331-637 |
| Cow position: | chr3:9715241-9715548 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 89, 37 |
| Conread position: | 331-666 |
| Cow position: | chr3:39408557-39408904 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 85, 236 |
| Conread position: | 331-674 |
| Cow position: | chr3:208742-208391 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 85, 228 |
| Conread position: | 331-674 |
| Cow position: | chr3:3732974-3733305 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 85, 161 |
| Conread position: | 331-674 |
| Cow position: | chr3:34397575-34397221 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 331-674 |
| Cow position: | chr3:39325108-39325457 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 166 |
| Conread position: | 331-675 |
| Cow position: | chr3:15056027-15055686 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 60 |
| Conread position: | 331-675 |
| Cow position: | chr3:17949913-17950250 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 180, 23 |
| Conread position: | 332-590 |
| Cow position: | chr3:2632376-2632640 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 84, 233 |
| Conread position: | 332-639 |
| Cow position: | chr3:6683862-6684181 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 85, 141 |
| Conread position: | 338-664 |
| Cow position: | chr3:3908605-3908271 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 136 |
| Conread position: | 339-676 |
| Cow position: | chr3:3978673-3979016 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 130, 80 |
| Conread position: | 342-680 |
| Cow position: | chr3:6879809-6879460 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 8, 83 |
| Conread position: | 343-620 |
| Cow position: | chr3:2855584-2855305 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 165, 61 |
| Conread position: | 344-634 |
| Cow position: | chr3:69216421-69216126 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 73, 147 |
| Conread position: | 347-674 |
| Cow position: | chr3:52866388-52866065 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 225 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 162, 143 |
| Conread position: | 357-620 |
| Cow position: | chr3:5048698-5048432 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 63, 75 |
| Conread position: | 360-674 |
| Cow position: | chr3:63006784-63006453 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 13, 112 |
| Conread position: | 381-673 |
| Cow position: | chr3:3052962-3053256 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 80, 51 |
| Conread position: | 392-612 |
| Cow position: | chr3:31899734-31899523 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 118, 27 |
| Conread position: | 416-674 |
| Cow position: | chr3:2910652-2910390 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 167, 27 |
| Conread position: | 525-674 |
| Cow position: | chr3:24593616-24593460 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 73 |
Show alignments to all cow chromosomes.