Cow genome map
| Conread name: | Ova1-OVRM10186H11 |
| Conread position: | 1-220 |
| Cow position: | chr5:35207461-35207241 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 88 |
| Conread position: | 1-270 |
| Cow position: | chr5:45705230-45704970 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 88 |
| Conread position: | 1-315 |
| Cow position: | chr5:72299052-72299365 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 17, 24 |
| Conread position: | 1-317 |
| Cow position: | chr5:5937525-5937208 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 88 |
| Conread position: | 1-318 |
| Cow position: | chr5:56442477-56442160 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 88 |
| Conread position: | 1-319 |
| Cow position: | chr5:42676462-42676161 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 74 |
| Conread position: | 324-666 |
| Cow position: | chr5:13424008-13424353 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 165 |
| Conread position: | 328-572 |
| Cow position: | chr5:31597387-31597632 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 92, 205 |
| Conread position: | 330-664 |
| Cow position: | chr5:61275222-61274885 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 240 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 91, 228 |
| Conread position: | 331-613 |
| Cow position: | chr5:26768140-26768422 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 91, 138 |
| Conread position: | 331-620 |
| Cow position: | chr5:9688735-9688442 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 89, 289 |
| Conread position: | 331-634 |
| Cow position: | chr5:24328412-24328720 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 331-636 |
| Cow position: | chr5:41552586-41552280 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 89, 172 |
| Conread position: | 331-664 |
| Cow position: | chr5:27062403-27062064 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 42 |
| Conread position: | 331-674 |
| Cow position: | chr5:6527198-6527543 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 175, 20 |
| Conread position: | 331-674 |
| Cow position: | chr5:73512285-73512623 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 89, 38 |
| Conread position: | 331-686 |
| Cow position: | chr5:12683204-12682853 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 250 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 159, 47 |
| Conread position: | 332-674 |
| Cow position: | chr5:52803656-52804009 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 333-668 |
| Cow position: | chr5:27568505-27568850 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 87, 207 |
| Conread position: | 338-620 |
| Cow position: | chr5:27337659-27337932 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 342-674 |
| Cow position: | chr5:49595209-49594866 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 238 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 73, 167 |
| Conread position: | 343-492 |
| Cow position: | chr5:14078203-14078354 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 343-636 |
| Cow position: | chr5:32735175-32734877 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 77, 294 |
| Conread position: | 343-674 |
| Cow position: | chr5:41964663-41964336 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 79, 273 |
| Conread position: | 343-674 |
| Cow position: | chr5:47774550-47774889 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 236 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 74, 185 |
| Conread position: | 344-674 |
| Cow position: | chr5:27653605-27653271 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 234 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 98, 76 |
| Conread position: | 382-673 |
| Cow position: | chr5:28029863-28030165 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 411-674 |
| Cow position: | chr5:29455954-29456224 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 88, 30 |
| Conread position: | 416-613 |
| Cow position: | chr5:26170272-26170474 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 425-674 |
| Cow position: | chr5:34964106-34963848 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 17, 24 |
Show alignments to all cow chromosomes.