Cow genome map
| Conread name: | Ova1-OVRM10186H11 |
| Conread position: | 1-176 |
| Cow position: | chr6:1109366-1109189 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 150 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 120, 88 |
| Conread position: | 1-204 |
| Cow position: | chr6:17344557-17344354 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 89 |
| Conread position: | 1-303 |
| Cow position: | chr6:16410413-16410115 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 88 |
| Conread position: | 1-320 |
| Cow position: | chr6:49761822-49761501 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 88 |
| Conread position: | 1-320 |
| Cow position: | chr6:53935280-53935594 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 74 |
| Conread position: | 1-320 |
| Cow position: | chr6:59619434-59619112 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 88 |
| Conread position: | 2-92 |
| Cow position: | chr6:33451201-33451111 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 80 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-320 |
| Cow position: | chr6:42267085-42266777 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 70 |
| Conread position: | 320-674 |
| Cow position: | chr6:12094507-12094142 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 262 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 9, 23 |
| Conread position: | 321-586 |
| Cow position: | chr6:10638984-10639250 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 0 |
| Conread position: | 327-494 |
| Cow position: | chr6:27588186-27588018 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 89, 153 |
| Conread position: | 330-639 |
| Cow position: | chr6:47957534-47957858 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 331-492 |
| Cow position: | chr6:57513572-57513735 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 331-590 |
| Cow position: | chr6:11279300-11279042 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 181, 17 |
| Conread position: | 331-600 |
| Cow position: | chr6:50121396-50121123 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 26, 122 |
| Conread position: | 331-620 |
| Cow position: | chr6:13275041-13275330 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 123 |
| Conread position: | 331-675 |
| Cow position: | chr6:6478049-6477698 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 225 |
| Conread position: | 331-678 |
| Cow position: | chr6:2400704-2401060 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 243 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 89, 39 |
| Conread position: | 337-666 |
| Cow position: | chr6:33387271-33387610 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 79, 132 |
| Conread position: | 338-620 |
| Cow position: | chr6:44591748-44592033 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 78, 126 |
| Conread position: | 342-674 |
| Cow position: | chr6:11167614-11167951 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 23 |
| Conread position: | 346-620 |
| Cow position: | chr6:19452409-19452686 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 70, 189 |
| Conread position: | 347-673 |
| Cow position: | chr6:38230715-38231049 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 95 |
| Conread position: | 373-554 |
| Cow position: | chr6:59619573-59619757 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 423-675 |
| Cow position: | chr6:34074202-34074450 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 35, 181 |
| Conread position: | 434-674 |
| Cow position: | chr6:42925941-42926187 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 452-677 |
| Cow position: | chr6:43608850-43608620 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 62, 163 |
Show alignments to all cow chromosomes.