Cow genome map
| Conread name: | Ova1-OVRM10186H11 |
| Conread position: | 1-320 |
| Cow position: | chrX:4407078-4406760 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 88 |
| Conread position: | 1-320 |
| Cow position: | chrX:6279408-6279730 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 87 |
| Conread position: | 1-320 |
| Cow position: | chrX:17891741-17891419 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 88 |
| Conread position: | 322-683 |
| Cow position: | chrX:28545453-28545822 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 245 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 10, 76 |
| Conread position: | 331-501 |
| Cow position: | chrX:23842475-23842647 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 331-515 |
| Cow position: | chrX:30004048-30003864 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 85, 112 |
| Conread position: | 331-613 |
| Cow position: | chrX:24273779-24274064 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 331-619 |
| Cow position: | chrX:27986019-27985730 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 86, 41 |
| Conread position: | 331-620 |
| Cow position: | chrX:21598965-21599264 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 331-620 |
| Cow position: | chrX:24123798-24123511 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 89, 135 |
| Conread position: | 331-632 |
| Cow position: | chrX:22776318-22776628 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 85, 158 |
| Conread position: | 331-634 |
| Cow position: | chrX:30047818-30047512 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 89, 38 |
| Conread position: | 331-664 |
| Cow position: | chrX:6277078-6276734 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 89, 261 |
| Conread position: | 331-664 |
| Cow position: | chrX:8907357-8907702 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 99, 88 |
| Conread position: | 331-664 |
| Cow position: | chrX:11670198-11669859 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 84, 11 |
| Conread position: | 331-664 |
| Cow position: | chrX:17672622-17672279 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 243 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 13, 6 |
| Conread position: | 331-673 |
| Cow position: | chrX:31033688-31034037 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 255 |
| Conread position: | 331-674 |
| Cow position: | chrX:5836386-5836031 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 89, 289 |
| Conread position: | 331-674 |
| Cow position: | chrX:21634261-21633915 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 110, 84 |
| Conread position: | 331-674 |
| Cow position: | chrX:21790936-21791264 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 183, 31 |
| Conread position: | 331-674 |
| Cow position: | chrX:25331372-25331719 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 89, 134 |
| Conread position: | 331-674 |
| Cow position: | chrX:26633668-26633330 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 89, 38 |
| Conread position: | 331-675 |
| Cow position: | chrX:6362567-6362231 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 243 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 179, 74 |
| Conread position: | 332-616 |
| Cow position: | chrX:26503491-26503774 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 78, 38 |
| Conread position: | 332-622 |
| Cow position: | chrX:21291179-21290883 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 85, 212 |
| Conread position: | 332-666 |
| Cow position: | chrX:36153956-36153618 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 88, 38 |
| Conread position: | 338-620 |
| Cow position: | chrX:26898342-26898060 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 78, 126 |
| Conread position: | 343-674 |
| Cow position: | chrX:20802383-20802719 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 75, 25 |
| Conread position: | 343-675 |
| Cow position: | chrX:42451210-42450884 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 167, 68 |
| Conread position: | 344-672 |
| Cow position: | chrX:22133709-22133368 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 28, 13 |
| Conread position: | 356-674 |
| Cow position: | chrX:24138075-24137746 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 64, 264 |
| Conread position: | 359-620 |
| Cow position: | chrX:30991628-30991367 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 68, 112 |
| Conread position: | 371-633 |
| Cow position: | chrX:28605739-28605473 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 422-673 |
| Cow position: | chrX:13008232-13007974 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 21, 101 |
Show alignments to all cow chromosomes.