Cow genome map

Conread name: Ova1-OVRM10187A11

Conread position: 1-125
Cow position: chr5:60595979-60596108 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 1-257
Cow position: chr5:13717422-13717683 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 110, 12

Conread position: 1-264
Cow position: chr5:16179360-16179644 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 1-335
Cow position: chr5:29060784-29061111 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 222
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 204, 97

Conread position: 1-376
Cow position: chr5:8820862-8821239 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 199

Conread position: 1-391
Cow position: chr5:58144466-58144848 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 76

Conread position: 2-160
Cow position: chr5:69383403-69383243 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 98, 11

Conread position: 2-330
Cow position: chr5:47323611-47323269 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 105, 5

Conread position: 2-356
Cow position: chr5:7044555-7044918 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 162

Conread position: 2-394
Cow position: chr5:46322655-46323057 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 11

Conread position: 2-468
Cow position: chr5:37941659-37942112 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 36

Conread position: 2-471
Cow position: chr5:17028243-17027776 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 11

Conread position: 3-96
Cow position: chr5:21721321-21721414 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-98
Cow position: chr5:60207856-60207762 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 3-103
Cow position: chr5:29599397-29599497 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-106
Cow position: chr5:1090673-1090777 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 3-112
Cow position: chr5:29979809-29979917 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 3-119
Cow position: chr5:36823032-36822916 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-122
Cow position: chr5:34288103-34288224 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 104
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 3-126
Cow position: chr5:35190259-35190132 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 106
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 87, 0

Conread position: 3-127
Cow position: chr5:5847697-5847824 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 3-127
Cow position: chr5:26167571-26167442 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 3-128
Cow position: chr5:55850029-55849905 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 22

Conread position: 3-137
Cow position: chr5:35647492-35647354 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 97, 0

Conread position: 3-137
Cow position: chr5:38169044-38168905 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 3-137
Cow position: chr5:54312750-54312612 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 3-139
Cow position: chr5:59627249-59627109 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 3-139
Cow position: chr5:60948281-60948142 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 3-140
Cow position: chr5:2240842-2240981 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 97, 0

Conread position: 3-146
Cow position: chr5:17604983-17605132 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 3-150
Cow position: chr5:9170435-9170583 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 91, 22

Conread position: 3-152
Cow position: chr5:51298562-51298717 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 3-154
Cow position: chr5:9369122-9369276 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 90, 142

Conread position: 3-154
Cow position: chr5:51490098-51490250 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 95

Conread position: 3-168
Cow position: chr5:17104999-17104833 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 87, 0

Conread position: 3-176
Cow position: chr5:57230188-57230365 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 12, 159

Conread position: 3-176
Cow position: chr5:61875686-61875517 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 95, 0

Conread position: 3-183
Cow position: chr5:26548988-26549174 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 18, 150

Conread position: 3-186
Cow position: chr5:22795363-22795178 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 87, 0

Conread position: 3-186
Cow position: chr5:57686588-57686776 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 96, 0

Conread position: 3-190
Cow position: chr5:20288111-20288303 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 29, 161

Conread position: 3-190
Cow position: chr5:52083492-52083297 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 16

Conread position: 3-190
Cow position: chr5:71724448-71724261 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 65, 74

Conread position: 3-191
Cow position: chr5:35982588-35982781 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 153
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 72, 160

Conread position: 3-192
Cow position: chr5:17602056-17602242 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 153
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 96, 121

Conread position: 3-194
Cow position: chr5:55795817-55796008 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 82, 143

Conread position: 3-195
Cow position: chr5:72006340-72006537 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 18, 156

Conread position: 3-196
Cow position: chr5:52001474-52001666 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 148

Conread position: 3-201
Cow position: chr5:15471078-15470882 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 127, 0

Conread position: 3-208
Cow position: chr5:45419988-45420191 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 139
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 108, 97

Conread position: 3-209
Cow position: chr5:57755886-57756089 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 110, 66

Conread position: 3-209
Cow position: chr5:59626823-59627032 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 168
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 97, 36

Conread position: 3-209
Cow position: chr5:59872931-59873149 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 3-209
Cow position: chr5:63059210-63059011 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 158, 89

Conread position: 3-209
Cow position: chr5:69636371-69636177 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 10, 0

Conread position: 3-210
Cow position: chr5:20994937-20995154 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 148
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 96, 0

Conread position: 3-210
Cow position: chr5:56338872-56339077 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 90, 158

Conread position: 3-211
Cow position: chr5:41981517-41981310 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 151, 0

Conread position: 3-230
Cow position: chr5:43403052-43402815 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 185
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 97, 28

Conread position: 3-237
Cow position: chr5:50575932-50575693 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 78, 54

Conread position: 3-248
Cow position: chr5:36038853-36039107 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 11

Conread position: 3-249
Cow position: chr5:54375353-54375611 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 154

Conread position: 3-250
Cow position: chr5:62378929-62378686 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 82, 138

Conread position: 3-254
Cow position: chr5:14920778-14921039 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 195
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 18, 135

Conread position: 3-255
Cow position: chr5:23678554-23678814 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 90, 46

Conread position: 3-255
Cow position: chr5:60183955-60183691 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 165

Conread position: 3-257
Cow position: chr5:42670716-42670968 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 164, 17

Conread position: 3-262
Cow position: chr5:53710540-53710811 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 89, 162

Conread position: 3-264
Cow position: chr5:45574771-45574497 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 272

Conread position: 3-264
Cow position: chr5:49440727-49440991 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 30

Conread position: 3-271
Cow position: chr5:56680405-56680121 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 201
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 77, 177

Conread position: 3-272
Cow position: chr5:49474399-49474669 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 10

Conread position: 3-273
Cow position: chr5:12434692-12434408 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 159

Conread position: 3-282
Cow position: chr5:73167863-73168135 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 201, 10

Conread position: 3-289
Cow position: chr5:63865957-63865651 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 3-303
Cow position: chr5:66972578-66972269 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 221
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 135, 94

Conread position: 3-305
Cow position: chr5:42050702-42050391 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 128

Conread position: 3-309
Cow position: chr5:35246961-35247271 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 90, 137

Conread position: 3-309
Cow position: chr5:46425707-46426011 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 224
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 38, 11

Conread position: 3-318
Cow position: chr5:41009851-41010166 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 17

Conread position: 3-318
Cow position: chr5:56317438-56317125 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 113

Conread position: 3-319
Cow position: chr5:55956061-55955735 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 57, 21

Conread position: 3-319
Cow position: chr5:56014879-56014564 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 11

Conread position: 3-327
Cow position: chr5:44028160-44028480 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 25

Conread position: 3-327
Cow position: chr5:65136414-65136105 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 239
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 11, 32

Conread position: 3-330
Cow position: chr5:17768001-17768325 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 224
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 203, 28

Conread position: 3-330
Cow position: chr5:61810920-61810611 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 243
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 203, 97

Conread position: 3-339
Cow position: chr5:69461484-69461144 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 57

Conread position: 3-347
Cow position: chr5:50943007-50943352 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 133

Conread position: 3-347
Cow position: chr5:57575922-57575567 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 19

Conread position: 3-352
Cow position: chr5:23168677-23169022 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 277

Conread position: 3-357
Cow position: chr5:4280597-4280255 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 157

Conread position: 3-360
Cow position: chr5:6572894-6572540 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 243
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 9, 69

Conread position: 3-363
Cow position: chr5:35969681-35969328 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 142

Conread position: 3-369
Cow position: chr5:44446716-44447109 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 162

Conread position: 3-370
Cow position: chr5:56028392-56028751 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 151

Conread position: 3-374
Cow position: chr5:25495209-25495563 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 97

Conread position: 3-382
Cow position: chr5:41165237-41164855 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 158

Conread position: 3-384
Cow position: chr5:34301065-34300690 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 93

Conread position: 3-386
Cow position: chr5:4031837-4032226 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 277

Conread position: 3-386
Cow position: chr5:72903087-72903461 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 151

Conread position: 3-387
Cow position: chr5:40109641-40109263 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 76

Conread position: 3-388
Cow position: chr5:49685128-49685520 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 26

Conread position: 3-388
Cow position: chr5:54086687-54086301 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 274
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 79, 106

Conread position: 3-390
Cow position: chr5:20779248-20779622 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 140

Conread position: 3-390
Cow position: chr5:30253890-30253502 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 158

Conread position: 3-391
Cow position: chr5:29352977-29353371 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 36

Conread position: 3-391
Cow position: chr5:35685086-35684692 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 160

Conread position: 3-391
Cow position: chr5:43929587-43929976 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 249

Conread position: 3-391
Cow position: chr5:43992475-43992083 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 138

Conread position: 3-391
Cow position: chr5:54350212-54350603 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 150

Conread position: 3-391
Cow position: chr5:55966734-55967125 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 28

Conread position: 3-391
Cow position: chr5:69337969-69337590 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 158

Conread position: 3-392
Cow position: chr5:67244067-67243681 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 161

Conread position: 3-406
Cow position: chr5:19278558-19278950 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 29

Conread position: 3-411
Cow position: chr5:56071009-56070591 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 358

Conread position: 3-417
Cow position: chr5:42064354-42063935 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 142

Conread position: 3-419
Cow position: chr5:31640574-31640159 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 214

Conread position: 3-434
Cow position: chr5:21617606-21617170 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 10

Conread position: 3-436
Cow position: chr5:9089879-9090307 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 43

Conread position: 3-448
Cow position: chr5:26476869-26477316 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 295
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 101, 95

Conread position: 3-457
Cow position: chr5:65753010-65752551 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 30

Conread position: 3-457
Cow position: chr5:65941102-65941560 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 28

Conread position: 3-461
Cow position: chr5:30276839-30276383 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 154

Conread position: 3-462
Cow position: chr5:17086871-17087343 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 76

Conread position: 3-465
Cow position: chr5:50723195-50722731 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 142

Conread position: 3-467
Cow position: chr5:28224601-28224136 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 62

Conread position: 3-467
Cow position: chr5:29828193-29827735 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 10

Conread position: 3-467
Cow position: chr5:52165030-52165497 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 47

Conread position: 3-467
Cow position: chr5:58856251-58855784 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 145

Conread position: 3-467
Cow position: chr5:61726110-61725653 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 22

Conread position: 3-467
Cow position: chr5:67932323-67932782 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 96

Conread position: 3-468
Cow position: chr5:9893975-9894443 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 10

Conread position: 3-468
Cow position: chr5:14314679-14314204 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 371

Conread position: 3-468
Cow position: chr5:26097439-26096978 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 96

Conread position: 3-468
Cow position: chr5:26990537-26990079 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 49

Conread position: 3-468
Cow position: chr5:35763404-35762971 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 27

Conread position: 3-468
Cow position: chr5:39258655-39258235 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 139

Conread position: 3-468
Cow position: chr5:39937264-39936784 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 308

Conread position: 3-468
Cow position: chr5:45225667-45226148 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 72

Conread position: 3-468
Cow position: chr5:46509715-46510187 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 176

Conread position: 3-468
Cow position: chr5:55068855-55068402 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 142

Conread position: 3-468
Cow position: chr5:55177036-55176573 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 73

Conread position: 3-468
Cow position: chr5:55756266-55756760 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 433

Conread position: 3-468
Cow position: chr5:66339224-66338767 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 73

Conread position: 3-468
Cow position: chr5:66366664-66366215 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 226

Conread position: 3-468
Cow position: chr5:74643529-74643978 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 116

Conread position: 3-471
Cow position: chr5:16206006-16206464 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 160

Conread position: 3-471
Cow position: chr5:16893623-16894091 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 29

Conread position: 3-471
Cow position: chr5:21829016-21828534 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 61

Conread position: 3-471
Cow position: chr5:30303040-30302576 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 107

Conread position: 3-471
Cow position: chr5:39447383-39447857 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 182

Conread position: 3-471
Cow position: chr5:41545744-41546212 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 150

Conread position: 3-471
Cow position: chr5:43858271-43858750 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 204

Conread position: 3-471
Cow position: chr5:45845539-45846015 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 36

Conread position: 3-471
Cow position: chr5:47601961-47601489 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 150

Conread position: 4-129
Cow position: chr5:75228051-75228180 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 4-192
Cow position: chr5:49341901-49342090 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 87, 157

Conread position: 4-209
Cow position: chr5:63234682-63234884 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 9, 0

Conread position: 4-242
Cow position: chr5:46681572-46681812 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 103, 37

Conread position: 4-261
Cow position: chr5:58446956-58446687 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 9, 147

Conread position: 4-281
Cow position: chr5:14473255-14473549 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 28, 279

Conread position: 4-281
Cow position: chr5:29097515-29097223 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 198
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 96, 35

Conread position: 4-281
Cow position: chr5:56877630-56877352 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 159

Conread position: 4-285
Cow position: chr5:57101635-57101916 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 21

Conread position: 4-286
Cow position: chr5:64026871-64027149 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 145

Conread position: 4-289
Cow position: chr5:70951742-70952020 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 9

Conread position: 4-322
Cow position: chr5:1987762-1987443 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 223
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 28, 39

Conread position: 4-342
Cow position: chr5:22643086-22643411 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 9

Conread position: 4-382
Cow position: chr5:6683218-6683581 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 138

Conread position: 4-382
Cow position: chr5:36855354-36854979 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 137

Conread position: 4-388
Cow position: chr5:38833270-38832878 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 157

Conread position: 4-391
Cow position: chr5:40594882-40595244 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 270
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 77, 0

Conread position: 4-400
Cow position: chr5:11229525-11229924 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 146

Conread position: 4-418
Cow position: chr5:6503733-6504139 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 172

Conread position: 4-466
Cow position: chr5:44796585-44797032 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 141

Conread position: 4-468
Cow position: chr5:25035110-25035582 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 115

Conread position: 4-468
Cow position: chr5:26377520-26377983 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 40

Conread position: 4-468
Cow position: chr5:56524322-56523855 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 318

Conread position: 4-468
Cow position: chr5:59082046-59082511 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 161

Conread position: 4-471
Cow position: chr5:35145478-35145028 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 60

Conread position: 5-110
Cow position: chr5:35394286-35394392 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 102, 0

Conread position: 5-150
Cow position: chr5:34914906-34915055 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 5-157
Cow position: chr5:50824738-50824584 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 88, 9

Conread position: 5-272
Cow position: chr5:18289269-18289002 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 204
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 197, 101

Conread position: 5-276
Cow position: chr5:63426859-63427137 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 195
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 81, 9

Conread position: 5-277
Cow position: chr5:991621-991334 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 155

Conread position: 5-277
Cow position: chr5:54767762-54768042 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 94, 120

Conread position: 5-299
Cow position: chr5:45397716-45397424 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 60

Conread position: 5-304
Cow position: chr5:12673331-12673620 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 105

Conread position: 5-339
Cow position: chr5:4221124-4220790 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 8

Conread position: 5-346
Cow position: chr5:69731647-69731320 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 115

Conread position: 5-376
Cow position: chr5:72895833-72895465 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 152

Conread position: 5-382
Cow position: chr5:74858722-74858340 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 257
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 92, 278

Conread position: 5-388
Cow position: chr5:57074183-57074574 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 191

Conread position: 5-431
Cow position: chr5:63987298-63987729 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 282

Conread position: 5-443
Cow position: chr5:458635-458177 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 68

Conread position: 5-468
Cow position: chr5:4166787-4166351 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 47

Conread position: 5-468
Cow position: chr5:4710007-4710463 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 8

Conread position: 5-468
Cow position: chr5:12322658-12323113 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 274

Conread position: 5-468
Cow position: chr5:26467775-26467303 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 351

Conread position: 5-468
Cow position: chr5:42845444-42845919 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 280

Conread position: 5-468
Cow position: chr5:43457384-43457828 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 137

Conread position: 5-468
Cow position: chr5:55942232-55942720 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 188

Conread position: 5-468
Cow position: chr5:67212507-67212062 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 25

Conread position: 5-468
Cow position: chr5:74016087-74015621 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 159

Conread position: 5-471
Cow position: chr5:44993902-44994367 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 86

Conread position: 6-160
Cow position: chr5:60523878-60523721 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 6-196
Cow position: chr5:56153759-56153569 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 101, 11

Conread position: 6-209
Cow position: chr5:30805310-30805110 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 151

Conread position: 6-209
Cow position: chr5:66551750-66551957 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 90, 160

Conread position: 6-333
Cow position: chr5:37808517-37808849 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 237
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 78, 190

Conread position: 6-382
Cow position: chr5:33538020-33537661 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 150

Conread position: 6-400
Cow position: chr5:59325697-59326079 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 13

Conread position: 6-471
Cow position: chr5:15364028-15363571 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 157

Conread position: 6-471
Cow position: chr5:72564910-72564437 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 165

Conread position: 7-119
Cow position: chr5:29149033-29148920 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 95
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 7-227
Cow position: chr5:70271011-70270783 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 100, 13

Conread position: 7-249
Cow position: chr5:12557142-12557396 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 90, 147

Conread position: 7-256
Cow position: chr5:38076338-38076594 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 93, 171

Conread position: 7-359
Cow position: chr5:57737244-57736904 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 138

Conread position: 7-379
Cow position: chr5:22242620-22243015 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 169

Conread position: 7-386
Cow position: chr5:37646399-37646789 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 53

Conread position: 7-399
Cow position: chr5:28302598-28302990 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 239

Conread position: 7-435
Cow position: chr5:50533243-50533667 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 273

Conread position: 7-468
Cow position: chr5:6045441-6044967 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 8-285
Cow position: chr5:20422050-20422319 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 5

Conread position: 8-471
Cow position: chr5:29771672-29771196 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 375

Conread position: 9-98
Cow position: chr5:49207184-49207273 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 78
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-152
Cow position: chr5:9233845-9233993 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 9-257
Cow position: chr5:7698143-7697893 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 196
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 90, 140

Conread position: 9-262
Cow position: chr5:64591952-64592211 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 194
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 73, 151

Conread position: 9-314
Cow position: chr5:65967588-65967897 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 9-379
Cow position: chr5:3771989-3771616 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 114

Conread position: 9-462
Cow position: chr5:15479268-15478795 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 36

Conread position: 9-464
Cow position: chr5:5110926-5111392 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 146

Conread position: 9-468
Cow position: chr5:53855849-53855383 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 155

Conread position: 10-468
Cow position: chr5:72045534-72045965 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 123

Conread position: 11-471
Cow position: chr5:6895986-6896446 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 304
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 121, 136

Conread position: 13-202
Cow position: chr5:22446049-22445863 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 51, 18

Conread position: 13-209
Cow position: chr5:61455983-61455787 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 14-125
Cow position: chr5:37842141-37842256 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 14-193
Cow position: chr5:2851728-2851546 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 126, 82

Conread position: 14-196
Cow position: chr5:56517242-56517057 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 148
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 72, 148

Conread position: 14-204
Cow position: chr5:66466452-66466265 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 77, 49

Conread position: 14-248
Cow position: chr5:35784851-35785079 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 29

Conread position: 14-270
Cow position: chr5:22667209-22666968 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 113

Conread position: 14-275
Cow position: chr5:44726196-44726456 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 201
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 86, 129

Conread position: 14-281
Cow position: chr5:40242181-40241915 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 196
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 93, 48

Conread position: 14-282
Cow position: chr5:29844418-29844142 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 181
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 120

Conread position: 14-284
Cow position: chr5:23529145-23529412 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 93, 25

Conread position: 14-321
Cow position: chr5:41452534-41452839 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 71

Conread position: 14-365
Cow position: chr5:26262541-26262890 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 68

Conread position: 14-370
Cow position: chr5:16025330-16025682 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 78

Conread position: 14-373
Cow position: chr5:27411263-27411614 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 245
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 72, 125

Conread position: 14-377
Cow position: chr5:71454474-71454824 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 85

Conread position: 14-380
Cow position: chr5:7723803-7723441 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 125

Conread position: 14-383
Cow position: chr5:24996085-24996458 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 61

Conread position: 14-384
Cow position: chr5:40927857-40928208 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 253
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 61, 33

Conread position: 14-385
Cow position: chr5:48143651-48144027 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 255
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 21, 36

Conread position: 14-386
Cow position: chr5:20128191-20127817 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 132

Conread position: 14-447
Cow position: chr5:14629667-14630124 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 292

Conread position: 14-464
Cow position: chr5:359801-360259 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 85

Conread position: 14-466
Cow position: chr5:68719005-68718573 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 136

Conread position: 14-468
Cow position: chr5:14903930-14904375 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 140

Conread position: 14-468
Cow position: chr5:62172549-62172087 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 11

Conread position: 14-471
Cow position: chr5:35826739-35826279 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 11

Conread position: 15-332
Cow position: chr5:46512632-46512950 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 56

Conread position: 15-374
Cow position: chr5:5257151-5257522 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 238

Conread position: 15-425
Cow position: chr5:12351672-12352058 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 10

Conread position: 15-467
Cow position: chr5:20783759-20783309 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 158

Conread position: 16-237
Cow position: chr5:35976646-35976429 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 74, 138

Conread position: 16-242
Cow position: chr5:30233044-30232802 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 10, 34

Conread position: 16-314
Cow position: chr5:74580925-74580627 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 123

Conread position: 16-334
Cow position: chr5:34625096-34624783 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 135

Conread position: 16-344
Cow position: chr5:34562153-34561813 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 149

Conread position: 16-367
Cow position: chr5:62142812-62142452 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 145

Conread position: 16-468
Cow position: chr5:43923026-43923468 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 33

Conread position: 16-468
Cow position: chr5:57934972-57935432 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 145

Conread position: 16-468
Cow position: chr5:65932807-65933248 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 81

Conread position: 17-391
Cow position: chr5:52000353-51999977 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 50

Conread position: 18-204
Cow position: chr5:24136848-24136660 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 76, 43

Conread position: 18-285
Cow position: chr5:7755437-7755702 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 14

Conread position: 18-471
Cow position: chr5:27155139-27154702 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 51

Conread position: 19-173
Cow position: chr5:45186987-45187142 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 66, 33

Conread position: 19-208
Cow position: chr5:63150036-63150224 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 81, 141

Conread position: 19-209
Cow position: chr5:1461222-1461029 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 80, 126

Conread position: 19-283
Cow position: chr5:72951977-72951701 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 145

Conread position: 19-362
Cow position: chr5:45804193-45803847 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 32

Conread position: 19-370
Cow position: chr5:15721941-15722275 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 127

Conread position: 19-390
Cow position: chr5:53835849-53835474 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 52

Conread position: 19-390
Cow position: chr5:57626921-57626568 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 47

Conread position: 19-397
Cow position: chr5:8024067-8024440 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 64

Conread position: 19-435
Cow position: chr5:63992039-63992450 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 142

Conread position: 19-466
Cow position: chr5:50821916-50821471 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 120

Conread position: 19-468
Cow position: chr5:74003502-74003965 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 116

Conread position: 19-471
Cow position: chr5:29903390-29903844 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 137

Conread position: 19-471
Cow position: chr5:44847888-44848332 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 129

Conread position: 19-471
Cow position: chr5:66257769-66257324 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 139

Conread position: 20-193
Cow position: chr5:40237343-40237171 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 87, 113

Conread position: 20-214
Cow position: chr5:63627403-63627588 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 20-260
Cow position: chr5:27171861-27172095 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 183, 80

Conread position: 20-382
Cow position: chr5:15426670-15426295 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 342

Conread position: 21-152
Cow position: chr5:65679842-65679974 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 21-380
Cow position: chr5:64758636-64758998 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 243

Conread position: 22-322
Cow position: chr5:3549662-3549951 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 221
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 121, 45

Conread position: 22-349
Cow position: chr5:56518092-56518410 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 244
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 77, 113

Conread position: 22-462
Cow position: chr5:28927464-28927910 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 62

Conread position: 22-468
Cow position: chr5:15598108-15598552 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 40

Conread position: 22-468
Cow position: chr5:62107357-62107808 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 17

Conread position: 25-209
Cow position: chr5:26150294-26150479 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 146
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 70, 132

Conread position: 25-338
Cow position: chr5:48009732-48010036 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 75

Conread position: 25-415
Cow position: chr5:64139687-64139297 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 109

Conread position: 27-377
Cow position: chr5:37065222-37064865 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 234
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 58, 12

Conread position: 28-468
Cow position: chr5:41609408-41608995 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 73

Conread position: 31-468
Cow position: chr5:58793486-58793933 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 119

Conread position: 32-471
Cow position: chr5:27615631-27615182 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 7

Conread position: 34-471
Cow position: chr5:20407560-20407980 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 130

Conread position: 35-277
Cow position: chr5:59717853-59717616 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 135

Conread position: 39-308
Cow position: chr5:37068996-37068732 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 179
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 170, 31

Conread position: 39-330
Cow position: chr5:55929057-55928761 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 207
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 54, 243

Conread position: 39-370
Cow position: chr5:48758053-48757723 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 232
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 42, 104

Conread position: 39-467
Cow position: chr5:68481335-68480892 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 317
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 172, 23

Conread position: 39-468
Cow position: chr5:61840302-61839869 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 77

Conread position: 40-468
Cow position: chr5:28248285-28247857 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 99

Conread position: 41-257
Cow position: chr5:57561634-57561405 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 42-411
Cow position: chr5:34050228-34049847 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 122

Conread position: 43-263
Cow position: chr5:19524009-19523779 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 115

Conread position: 43-288
Cow position: chr5:55259519-55259284 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 73

Conread position: 43-313
Cow position: chr5:61809577-61809854 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 57, 122

Conread position: 43-340
Cow position: chr5:74610593-74610883 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 210
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 68, 38

Conread position: 43-356
Cow position: chr5:44049807-44049495 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 232
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 57, 80

Conread position: 43-380
Cow position: chr5:64137365-64137020 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 116

Conread position: 43-422
Cow position: chr5:4506856-4507234 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 64

Conread position: 43-431
Cow position: chr5:60952769-60952380 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 177

Conread position: 43-467
Cow position: chr5:12149655-12149228 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 241

Conread position: 43-468
Cow position: chr5:39094659-39094234 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 57

Conread position: 43-471
Cow position: chr5:22565728-22565316 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 57

Conread position: 44-359
Cow position: chr5:40039657-40039981 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 119

Conread position: 49-197
Cow position: chr5:63192638-63192788 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 37, 108

Conread position: 49-203
Cow position: chr5:43408255-43408411 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 84

Conread position: 49-258
Cow position: chr5:56868109-56867911 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 28, 11

Conread position: 49-378
Cow position: chr5:41302975-41303320 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 199

Conread position: 51-439
Cow position: chr5:31469492-31469873 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 56

Conread position: 51-465
Cow position: chr5:18702119-18702525 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 49

Conread position: 51-468
Cow position: chr5:33414310-33414724 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 117

Conread position: 52-468
Cow position: chr5:21525259-21524846 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 62

Conread position: 53-209
Cow position: chr5:57639875-57640026 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 53-351
Cow position: chr5:45409422-45409123 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 221
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 58, 47

Conread position: 53-384
Cow position: chr5:73080304-73079977 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 236
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 37, 212

Conread position: 53-468
Cow position: chr5:28330244-28330648 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 55

Conread position: 53-468
Cow position: chr5:45706133-45705728 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 54

Conread position: 54-457
Cow position: chr5:16509204-16508788 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 236

Conread position: 55-426
Cow position: chr5:40889200-40889560 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 52

Conread position: 62-468
Cow position: chr5:38805254-38805663 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 77

Conread position: 63-471
Cow position: chr5:35209386-35209794 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 74

Conread position: 67-376
Cow position: chr5:56820179-56820487 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 48

Conread position: 67-378
Cow position: chr5:46122268-46122578 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 222
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 19, 72

Conread position: 69-468
Cow position: chr5:47313556-47313154 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 83

Conread position: 69-471
Cow position: chr5:34638967-34638571 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 92

Conread position: 70-359
Cow position: chr5:63185172-63185464 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 30

Conread position: 72-267
Cow position: chr5:50799614-50799418 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 28, 66

Conread position: 79-381
Cow position: chr5:3627084-3627400 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 12

Conread position: 85-323
Cow position: chr5:29979919-29980160 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 68, 193

Conread position: 85-378
Cow position: chr5:28926117-28926414 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 219
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 126, 61

Conread position: 85-468
Cow position: chr5:2500116-2500512 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 275
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 70, 219

Conread position: 89-330
Cow position: chr5:6670134-6670379 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 71

Conread position: 92-362
Cow position: chr5:35235653-35235922 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 197
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 119, 56

Conread position: 92-394
Cow position: chr5:32956038-32956335 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 119, 54

Conread position: 95-235
Cow position: chr5:34922904-34923040 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 95-366
Cow position: chr5:60126428-60126156 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 68

Conread position: 99-430
Cow position: chr5:29681133-29680797 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 30

Conread position: 99-457
Cow position: chr5:4797274-4797621 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 44

Conread position: 99-471
Cow position: chr5:34115702-34115326 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 172

Conread position: 99-471
Cow position: chr5:62826703-62827077 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 8

Conread position: 100-468
Cow position: chr5:64651181-64650809 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 101-471
Cow position: chr5:24485387-24485732 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 169

Conread position: 102-468
Cow position: chr5:27015726-27015374 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 52

Conread position: 104-464
Cow position: chr5:6086516-6086877 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 42

Conread position: 105-468
Cow position: chr5:19470147-19470502 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 108-384
Cow position: chr5:37713854-37714140 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 22

Conread position: 111-280
Cow position: chr5:38647392-38647224 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 95, 34

Conread position: 115-468
Cow position: chr5:34288435-34288786 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 135

Conread position: 116-281
Cow position: chr5:7921372-7921536 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 87, 39

Conread position: 122-335
Cow position: chr5:17644628-17644842 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 84, 35

Conread position: 123-435
Cow position: chr5:9859686-9859999 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 245

Conread position: 123-448
Cow position: chr5:72150275-72149952 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 157

Conread position: 123-468
Cow position: chr5:10261208-10261561 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 246

Conread position: 124-277
Cow position: chr5:41486713-41486873 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 36, 15

Conread position: 131-471
Cow position: chr5:26376574-26376246 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 238
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 14, 99

Conread position: 135-353
Cow position: chr5:35449263-35449049 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 169
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 34, 25

Conread position: 137-437
Cow position: chr5:72286898-72287207 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 212
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 66, 141

Conread position: 138-426
Cow position: chr5:21357014-21357296 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 196
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 10

Conread position: 138-468
Cow position: chr5:14420334-14420664 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 7

Conread position: 138-468
Cow position: chr5:37736701-37736366 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 242
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 28, 39

Conread position: 139-467
Cow position: chr5:42748166-42747844 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 241
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 64, 20

Conread position: 140-370
Cow position: chr5:5848178-5848408 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 182
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 57, 141

Conread position: 142-325
Cow position: chr5:38838045-38838234 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 68, 32

Conread position: 144-389
Cow position: chr5:13044387-13044651 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 67, 14

Conread position: 146-325
Cow position: chr5:53145881-53146063 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 61, 13

Conread position: 146-361
Cow position: chr5:17812652-17812870 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 148
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 92, 0

Conread position: 146-370
Cow position: chr5:1950058-1950281 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 63, 128

Conread position: 146-448
Cow position: chr5:61488104-61488402 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 224
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 62, 12

Conread position: 146-471
Cow position: chr5:4631124-4630804 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 237
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 65, 13

Conread position: 148-471
Cow position: chr5:51357496-51357824 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 233

Conread position: 149-281
Cow position: chr5:19294487-19294622 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 92

Conread position: 150-362
Cow position: chr5:62026946-62027159 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 61, 123

Conread position: 150-380
Cow position: chr5:73253093-73252865 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 17, 22

Conread position: 151-426
Cow position: chr5:59297959-59298236 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 127

Conread position: 152-414
Cow position: chr5:3492194-3491936 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 117

Conread position: 152-465
Cow position: chr5:1398079-1398405 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 222
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 15, 20

Conread position: 152-467
Cow position: chr5:16185087-16184774 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 129

Conread position: 158-384
Cow position: chr5:45037014-45036785 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 184
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 53, 72

Conread position: 158-388
Cow position: chr5:56433797-56433562 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 180
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 53, 202

Conread position: 160-471
Cow position: chr5:60520154-60519853 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 106

Conread position: 161-366
Cow position: chr5:57271275-57271483 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 50, 113

Conread position: 172-318
Cow position: chr5:61875205-61875347 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 39

Conread position: 173-384
Cow position: chr5:33467064-33467277 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 107

Conread position: 180-471
Cow position: chr5:12672068-12672344 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 202-384
Cow position: chr5:24837003-24837175 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 148
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 76, 0

Show alignments to all cow chromosomes.