Cow genome map

Conread name: Ova1-OVRM10187A11

Conread position: 1-129
Cow position: chr6:2757949-2757822 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 98

Conread position: 1-209
Cow position: chr6:36284406-36284198 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 8, 43

Conread position: 1-271
Cow position: chr6:10039888-10039609 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 122, 170

Conread position: 1-351
Cow position: chr6:65259328-65259655 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 246
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 83, 12

Conread position: 1-359
Cow position: chr6:16191836-16191471 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 254
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 147, 80

Conread position: 1-374
Cow position: chr6:23532817-23532452 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 12

Conread position: 1-381
Cow position: chr6:21736730-21737102 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 12

Conread position: 1-388
Cow position: chr6:51581089-51581484 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 40

Conread position: 1-468
Cow position: chr6:35842822-35842356 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 38

Conread position: 1-468
Cow position: chr6:49398453-49398922 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 114

Conread position: 1-468
Cow position: chr6:67214912-67214437 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 12

Conread position: 1-471
Cow position: chr6:36470399-36470873 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 11

Conread position: 2-209
Cow position: chr6:67643527-67643735 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 100, 162

Conread position: 2-323
Cow position: chr6:27888516-27888188 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 236
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 15, 152

Conread position: 2-359
Cow position: chr6:7128240-7128598 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 32

Conread position: 2-444
Cow position: chr6:21535203-21534778 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 159

Conread position: 3-111
Cow position: chr6:47676175-47676070 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 3-120
Cow position: chr6:36516123-36516006 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 104, 94

Conread position: 3-128
Cow position: chr6:3936945-3936818 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 96, 91

Conread position: 3-129
Cow position: chr6:50771200-50771326 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 3-139
Cow position: chr6:21066720-21066861 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 3-148
Cow position: chr6:30024048-30023899 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 3-151
Cow position: chr6:1002100-1002252 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 97, 0

Conread position: 3-151
Cow position: chr6:21470266-21470418 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 96, 0

Conread position: 3-162
Cow position: chr6:1941670-1941832 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 74, 11

Conread position: 3-165
Cow position: chr6:67069648-67069820 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 59, 127

Conread position: 3-182
Cow position: chr6:58725531-58725358 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 97, 31

Conread position: 3-186
Cow position: chr6:21293332-21293518 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 59

Conread position: 3-186
Cow position: chr6:53090171-53089986 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 149
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 97, 28

Conread position: 3-190
Cow position: chr6:48097436-48097627 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 54, 151

Conread position: 3-208
Cow position: chr6:55535589-55535792 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 87, 54

Conread position: 3-209
Cow position: chr6:3351193-3350975 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 18, 0

Conread position: 3-209
Cow position: chr6:9302557-9302759 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 87, 155

Conread position: 3-209
Cow position: chr6:18144360-18144149 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 85, 163

Conread position: 3-209
Cow position: chr6:24536368-24536586 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 34

Conread position: 3-209
Cow position: chr6:32809444-32809232 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 103, 161

Conread position: 3-209
Cow position: chr6:60468390-60468193 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 97, 36

Conread position: 3-209
Cow position: chr6:67282057-67281853 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 90, 132

Conread position: 3-209
Cow position: chr6:68816329-68816122 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 157
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 82, 131

Conread position: 3-227
Cow position: chr6:18117887-18118120 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 177
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 82, 0

Conread position: 3-229
Cow position: chr6:50504619-50504387 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 90, 162

Conread position: 3-234
Cow position: chr6:7801233-7801465 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 7, 96

Conread position: 3-235
Cow position: chr6:693981-694223 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 184
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 50, 156

Conread position: 3-235
Cow position: chr6:37395237-37395483 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 55, 240

Conread position: 3-236
Cow position: chr6:22985690-22985935 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 187
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 41, 157

Conread position: 3-238
Cow position: chr6:2623935-2623703 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 200, 11

Conread position: 3-238
Cow position: chr6:23465870-23466108 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 17, 80

Conread position: 3-245
Cow position: chr6:67451208-67451451 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 97, 150

Conread position: 3-256
Cow position: chr6:3592560-3592304 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 135, 119

Conread position: 3-262
Cow position: chr6:60273846-60274109 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 10

Conread position: 3-264
Cow position: chr6:61168918-61168670 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 154

Conread position: 3-269
Cow position: chr6:59603045-59603317 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 162

Conread position: 3-270
Cow position: chr6:582110-582382 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 199
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 83, 159

Conread position: 3-271
Cow position: chr6:61524042-61524310 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 157

Conread position: 3-281
Cow position: chr6:43134776-43135066 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 204
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 81, 142

Conread position: 3-284
Cow position: chr6:21235206-21234919 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 201
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 96, 143

Conread position: 3-289
Cow position: chr6:53841343-53841629 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 90, 136

Conread position: 3-315
Cow position: chr6:4691813-4692136 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 227
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 97, 46

Conread position: 3-318
Cow position: chr6:67323472-67323161 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 225
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 81, 141

Conread position: 3-323
Cow position: chr6:120408-120079 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 159

Conread position: 3-326
Cow position: chr6:15243418-15243088 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 158

Conread position: 3-330
Cow position: chr6:16764483-16764809 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 235
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 108, 268

Conread position: 3-336
Cow position: chr6:65264383-65264708 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 237
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 208, 132

Conread position: 3-345
Cow position: chr6:47575067-47574723 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 10

Conread position: 3-351
Cow position: chr6:47799456-47799110 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 158

Conread position: 3-351
Cow position: chr6:50577684-50577332 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 98

Conread position: 3-358
Cow position: chr6:63720364-63720004 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 288

Conread position: 3-370
Cow position: chr6:19695969-19695600 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 145

Conread position: 3-375
Cow position: chr6:53024643-53025010 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 6

Conread position: 3-378
Cow position: chr6:7539735-7539358 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 60

Conread position: 3-380
Cow position: chr6:8966260-8965873 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 127

Conread position: 3-383
Cow position: chr6:37199375-37199769 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 41

Conread position: 3-384
Cow position: chr6:38441335-38440961 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 95

Conread position: 3-384
Cow position: chr6:53460404-53460792 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 300

Conread position: 3-384
Cow position: chr6:53652203-53651818 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 128

Conread position: 3-386
Cow position: chr6:37149352-37148974 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 142

Conread position: 3-391
Cow position: chr6:24468233-24468620 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 136

Conread position: 3-391
Cow position: chr6:44194387-44194773 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 41

Conread position: 3-401
Cow position: chr6:46860003-46860403 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 33

Conread position: 3-403
Cow position: chr6:41375932-41375513 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 170

Conread position: 3-404
Cow position: chr6:26915492-26915089 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 138

Conread position: 3-410
Cow position: chr6:56850183-56849771 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 168

Conread position: 3-411
Cow position: chr6:15242999-15242588 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 149

Conread position: 3-416
Cow position: chr6:67951112-67950708 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 86

Conread position: 3-444
Cow position: chr6:55282131-55282570 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 11

Conread position: 3-446
Cow position: chr6:6264818-6264363 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 120

Conread position: 3-465
Cow position: chr6:44078677-44078214 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 95

Conread position: 3-467
Cow position: chr6:10105816-10106304 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 3-467
Cow position: chr6:39358179-39358642 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 5

Conread position: 3-467
Cow position: chr6:45690447-45690913 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 139

Conread position: 3-467
Cow position: chr6:47339193-47339660 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 168

Conread position: 3-467
Cow position: chr6:65871199-65870721 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 64

Conread position: 3-468
Cow position: chr6:445488-445022 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 164

Conread position: 3-468
Cow position: chr6:3978480-3978966 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 291

Conread position: 3-468
Cow position: chr6:5609284-5609763 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 156

Conread position: 3-468
Cow position: chr6:13367448-13366996 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 144

Conread position: 3-468
Cow position: chr6:16700426-16699957 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 148

Conread position: 3-468
Cow position: chr6:23696163-23695693 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 280

Conread position: 3-468
Cow position: chr6:24781397-24781869 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 49

Conread position: 3-468
Cow position: chr6:35103165-35103629 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 95

Conread position: 3-468
Cow position: chr6:46558222-46557753 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 187

Conread position: 3-468
Cow position: chr6:51835559-51835096 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 22

Conread position: 3-471
Cow position: chr6:10613004-10612555 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 81

Conread position: 3-471
Cow position: chr6:38771443-38770991 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 93

Conread position: 3-471
Cow position: chr6:46465984-46465520 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 156

Conread position: 3-471
Cow position: chr6:52478247-52478750 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 3-471
Cow position: chr6:61269475-61269027 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 28

Conread position: 3-471
Cow position: chr6:66531661-66532110 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 10

Conread position: 4-112
Cow position: chr6:60186501-60186613 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 96
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 4-116
Cow position: chr6:36570621-36570509 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 4-124
Cow position: chr6:41226671-41226792 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 4-156
Cow position: chr6:60850862-60850707 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 81, 135

Conread position: 4-203
Cow position: chr6:66570601-66570399 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 96, 10

Conread position: 4-208
Cow position: chr6:47884868-47885064 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 88, 0

Conread position: 4-263
Cow position: chr6:7119457-7119714 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 197
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 95, 149

Conread position: 4-294
Cow position: chr6:60667571-60667286 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 103, 14

Conread position: 4-309
Cow position: chr6:16316478-16316160 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 227
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 72, 272

Conread position: 4-343
Cow position: chr6:37783562-37783234 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 248
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 96, 155

Conread position: 4-358
Cow position: chr6:6401112-6400753 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 27

Conread position: 4-391
Cow position: chr6:60144036-60144405 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 144

Conread position: 4-408
Cow position: chr6:38853495-38853903 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 148

Conread position: 4-436
Cow position: chr6:54365170-54365596 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 41

Conread position: 4-463
Cow position: chr6:47520215-47519751 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 364

Conread position: 4-468
Cow position: chr6:5095380-5095859 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 156

Conread position: 4-468
Cow position: chr6:13687653-13688114 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 10

Conread position: 4-468
Cow position: chr6:39093911-39093458 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 331
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 96, 32

Conread position: 4-468
Cow position: chr6:67187846-67187392 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 235

Conread position: 5-119
Cow position: chr6:28900487-28900369 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 88, 0

Conread position: 5-129
Cow position: chr6:16091063-16090936 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 80, 17

Conread position: 5-133
Cow position: chr6:51933710-51933583 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 109
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 81, 19

Conread position: 5-254
Cow position: chr6:44867381-44867636 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 141

Conread position: 5-297
Cow position: chr6:38640394-38640093 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 160

Conread position: 5-338
Cow position: chr6:8125487-8125157 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 140

Conread position: 5-362
Cow position: chr6:59069459-59069827 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 152

Conread position: 5-376
Cow position: chr6:6098105-6098495 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 283

Conread position: 5-384
Cow position: chr6:36202983-36202607 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 178

Conread position: 5-404
Cow position: chr6:9736500-9736880 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 33

Conread position: 5-448
Cow position: chr6:54867678-54867227 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 271

Conread position: 5-468
Cow position: chr6:6060410-6060862 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 141

Conread position: 5-468
Cow position: chr6:15937694-15938169 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 141

Conread position: 5-468
Cow position: chr6:36196370-36195909 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 8

Conread position: 6-152
Cow position: chr6:54471772-54471921 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 6-152
Cow position: chr6:61109945-61109797 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 80, 7

Conread position: 6-310
Cow position: chr6:57571639-57571326 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 147

Conread position: 6-311
Cow position: chr6:46282844-46283146 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 190

Conread position: 6-330
Cow position: chr6:19446410-19446093 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 155

Conread position: 6-363
Cow position: chr6:5113896-5114245 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 6-391
Cow position: chr6:68049577-68049208 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 71

Conread position: 6-455
Cow position: chr6:34195989-34196440 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 135

Conread position: 6-468
Cow position: chr6:42565848-42565381 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 29

Conread position: 7-190
Cow position: chr6:62056773-62056587 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 148
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 79, 143

Conread position: 7-209
Cow position: chr6:28178796-28178990 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 7-209
Cow position: chr6:47958971-47958768 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 91

Conread position: 7-323
Cow position: chr6:57546070-57546376 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 195, 82

Conread position: 7-388
Cow position: chr6:21869490-21869870 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 158

Conread position: 7-411
Cow position: chr6:54132971-54132571 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 28

Conread position: 8-253
Cow position: chr6:17794606-17794850 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 92, 142

Conread position: 8-330
Cow position: chr6:15447040-15447375 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 160

Conread position: 8-336
Cow position: chr6:11246924-11246591 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 26

Conread position: 8-361
Cow position: chr6:12091834-12092182 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 115

Conread position: 9-140
Cow position: chr6:12761435-12761301 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 90, 56

Conread position: 9-199
Cow position: chr6:35964378-35964568 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 89

Conread position: 9-200
Cow position: chr6:34119197-34119390 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 84, 148

Conread position: 9-217
Cow position: chr6:19131587-19131378 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 75, 136

Conread position: 9-225
Cow position: chr6:49437490-49437278 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 89, 152

Conread position: 9-235
Cow position: chr6:11830344-11830118 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 202, 15

Conread position: 9-235
Cow position: chr6:60516982-60516757 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 176
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 78, 143

Conread position: 9-323
Cow position: chr6:31847084-31847380 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 216
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 166, 74

Conread position: 9-406
Cow position: chr6:54990844-54991235 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 144

Conread position: 9-411
Cow position: chr6:68376166-68376551 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 25

Conread position: 10-255
Cow position: chr6:66375177-66375426 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 191
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 90, 158

Conread position: 10-264
Cow position: chr6:26043890-26043647 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 10-445
Cow position: chr6:61515036-61515481 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 48

Conread position: 10-467
Cow position: chr6:19681369-19681820 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 238

Conread position: 11-388
Cow position: chr6:66874503-66874137 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 11

Conread position: 13-234
Cow position: chr6:59770376-59770156 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 83, 18

Conread position: 13-281
Cow position: chr6:25614938-25615222 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 209
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 60, 260

Conread position: 13-448
Cow position: chr6:38218820-38218379 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 131

Conread position: 13-467
Cow position: chr6:26728380-26728830 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 21

Conread position: 14-119
Cow position: chr6:25773067-25773173 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 14-183
Cow position: chr6:53546187-53546017 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 85, 147

Conread position: 14-190
Cow position: chr6:68685705-68685529 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 93, 146

Conread position: 14-197
Cow position: chr6:19259190-19259377 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 86, 153

Conread position: 14-208
Cow position: chr6:17068496-17068692 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 137

Conread position: 14-209
Cow position: chr6:2078663-2078864 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 162
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 94, 0

Conread position: 14-209
Cow position: chr6:16287909-16288096 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 65, 118

Conread position: 14-250
Cow position: chr6:17245466-17245697 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 86, 40

Conread position: 14-251
Cow position: chr6:143223-143460 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 85, 130

Conread position: 14-275
Cow position: chr6:58597353-58597620 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 14-321
Cow position: chr6:58590425-58590116 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 208

Conread position: 14-322
Cow position: chr6:48112348-48112045 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 124

Conread position: 14-342
Cow position: chr6:52901390-52901062 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 236
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 11, 18

Conread position: 14-367
Cow position: chr6:51463482-51463820 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 40

Conread position: 14-369
Cow position: chr6:38641645-38641292 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 70

Conread position: 14-378
Cow position: chr6:17997168-17997530 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 88

Conread position: 14-384
Cow position: chr6:28976888-28977252 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 207

Conread position: 14-384
Cow position: chr6:31564186-31564554 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 67

Conread position: 14-384
Cow position: chr6:45064865-45065227 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 266
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 79, 142

Conread position: 14-388
Cow position: chr6:46865440-46865824 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 264
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 70, 131

Conread position: 14-400
Cow position: chr6:13040591-13040215 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 43

Conread position: 14-464
Cow position: chr6:9008460-9008908 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 94

Conread position: 14-467
Cow position: chr6:11169854-11169404 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 153

Conread position: 14-468
Cow position: chr6:8637433-8636970 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 273

Conread position: 14-468
Cow position: chr6:15305720-15305284 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 130

Conread position: 14-468
Cow position: chr6:28483168-28482710 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 132

Conread position: 14-468
Cow position: chr6:33302546-33302106 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 84

Conread position: 14-468
Cow position: chr6:46571257-46570816 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 103

Conread position: 14-471
Cow position: chr6:2547407-2546935 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 332

Conread position: 14-471
Cow position: chr6:8209454-8209893 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 44

Conread position: 14-471
Cow position: chr6:17414293-17414761 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 149

Conread position: 14-471
Cow position: chr6:63047744-63047269 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 298

Conread position: 15-175
Cow position: chr6:13653494-13653340 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 143, 65

Conread position: 15-385
Cow position: chr6:4383629-4383271 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 19

Conread position: 16-191
Cow position: chr6:63065979-63065798 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 61, 154

Conread position: 16-209
Cow position: chr6:51530038-51530230 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 77, 131

Conread position: 16-359
Cow position: chr6:32268738-32269066 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 242
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 195, 115

Conread position: 16-448
Cow position: chr6:57164575-57164142 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 25

Conread position: 16-471
Cow position: chr6:32287785-32287312 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 47

Conread position: 18-129
Cow position: chr6:18430386-18430497 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 18-319
Cow position: chr6:27815322-27815625 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 207
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 63

Conread position: 18-468
Cow position: chr6:32122056-32121606 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 25

Conread position: 18-471
Cow position: chr6:36652569-36652122 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 21

Conread position: 19-129
Cow position: chr6:23938207-23938093 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 19-147
Cow position: chr6:43651899-43651767 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 19-150
Cow position: chr6:1871051-1871186 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 19-151
Cow position: chr6:18422844-18422979 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 19-182
Cow position: chr6:4702677-4702842 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 80, 144

Conread position: 19-209
Cow position: chr6:31078722-31078916 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 81, 16

Conread position: 19-212
Cow position: chr6:32853334-32853139 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 158
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 67, 145

Conread position: 19-289
Cow position: chr6:28999793-29000052 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 211
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 15

Conread position: 19-312
Cow position: chr6:6965253-6965534 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 81, 47

Conread position: 19-330
Cow position: chr6:47640286-47640604 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 6

Conread position: 19-362
Cow position: chr6:21231672-21231337 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 150

Conread position: 19-391
Cow position: chr6:60350145-60350527 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 132

Conread position: 19-454
Cow position: chr6:7130733-7131162 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 150

Conread position: 19-468
Cow position: chr6:37634942-37634485 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 12

Conread position: 19-471
Cow position: chr6:12551417-12550960 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 144

Conread position: 20-149
Cow position: chr6:57328248-57328380 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 70, 37

Conread position: 20-359
Cow position: chr6:16423847-16423503 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 47

Conread position: 20-471
Cow position: chr6:58074193-58073735 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 18

Conread position: 21-195
Cow position: chr6:69334165-69334342 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 52, 143

Conread position: 21-198
Cow position: chr6:60266038-60266215 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 143
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 78, 118

Conread position: 21-209
Cow position: chr6:68652206-68652397 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 71, 141

Conread position: 21-382
Cow position: chr6:7189974-7190338 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 116

Conread position: 21-424
Cow position: chr6:49421647-49422043 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 96

Conread position: 21-467
Cow position: chr6:17090743-17090289 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 18

Conread position: 21-471
Cow position: chr6:56843299-56842852 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 220

Conread position: 22-204
Cow position: chr6:32516966-32517139 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 146
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 71, 22

Conread position: 22-390
Cow position: chr6:35613273-35613636 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 148

Conread position: 22-466
Cow position: chr6:31526190-31525749 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 85

Conread position: 22-471
Cow position: chr6:1886523-1886955 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 123

Conread position: 22-471
Cow position: chr6:4864403-4864846 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 128

Conread position: 22-471
Cow position: chr6:47305483-47305020 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 12

Conread position: 23-402
Cow position: chr6:20097816-20098203 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 280

Conread position: 24-264
Cow position: chr6:59718938-59718691 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 71, 126

Conread position: 27-396
Cow position: chr6:38614951-38614590 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 65

Conread position: 27-427
Cow position: chr6:24223021-24223425 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 271
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 124, 12

Conread position: 30-193
Cow position: chr6:54082853-54083019 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 77, 101

Conread position: 32-468
Cow position: chr6:19427583-19427145 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 7

Conread position: 34-392
Cow position: chr6:130030-130393 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 114

Conread position: 38-316
Cow position: chr6:61608640-61608354 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 124

Conread position: 39-360
Cow position: chr6:65872014-65871700 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 211
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 25

Conread position: 39-382
Cow position: chr6:23247839-23248182 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 122

Conread position: 39-383
Cow position: chr6:899166-899504 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 122

Conread position: 39-388
Cow position: chr6:28079787-28080127 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 246
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 172, 54

Conread position: 39-391
Cow position: chr6:48572753-48573110 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 98

Conread position: 39-448
Cow position: chr6:55689153-55688756 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 68

Conread position: 39-471
Cow position: chr6:28810871-28811303 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 60

Conread position: 39-471
Cow position: chr6:31635557-31635995 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 208

Conread position: 39-471
Cow position: chr6:63197036-63197475 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 100

Conread position: 40-285
Cow position: chr6:15022421-15022684 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 198
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 60, 121

Conread position: 41-325
Cow position: chr6:12542805-12543095 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 243

Conread position: 41-356
Cow position: chr6:28318522-28318216 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 96

Conread position: 43-227
Cow position: chr6:28972913-28973097 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 103

Conread position: 43-268
Cow position: chr6:54208012-54208248 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 86

Conread position: 43-281
Cow position: chr6:16266847-16266597 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 64, 114

Conread position: 43-358
Cow position: chr6:52412982-52412659 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 82

Conread position: 43-466
Cow position: chr6:48567231-48567645 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 14

Conread position: 43-468
Cow position: chr6:1770075-1770500 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 115

Conread position: 43-468
Cow position: chr6:10331978-10332411 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 57

Conread position: 43-468
Cow position: chr6:60673688-60673243 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 334

Conread position: 43-468
Cow position: chr6:66363112-66363549 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 103

Conread position: 45-209
Cow position: chr6:47306026-47306182 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 49-194
Cow position: chr6:12197297-12197148 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 116

Conread position: 49-391
Cow position: chr6:2582976-2582647 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 243
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 109, 13

Conread position: 51-400
Cow position: chr6:54600463-54600131 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 254
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 56, 114

Conread position: 53-327
Cow position: chr6:60783983-60783706 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 202
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 47, 65

Conread position: 53-413
Cow position: chr6:58732190-58732562 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 49

Conread position: 58-382
Cow position: chr6:54430938-54430600 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 49

Conread position: 61-368
Cow position: chr6:20157438-20157120 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 229
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 46, 96

Conread position: 61-468
Cow position: chr6:8318059-8318470 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 97

Conread position: 62-382
Cow position: chr6:35415411-35415740 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 31, 73

Conread position: 62-384
Cow position: chr6:6994852-6995165 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 213
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 32

Conread position: 62-406
Cow position: chr6:7173645-7174013 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 248
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 29, 113

Conread position: 63-411
Cow position: chr6:20330111-20329773 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 126

Conread position: 68-232
Cow position: chr6:36493443-36493622 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 68-326
Cow position: chr6:59109043-59108779 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 31, 77

Conread position: 70-471
Cow position: chr6:1944809-1944422 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 80

Conread position: 73-375
Cow position: chr6:57405032-57405336 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 223
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 21, 72

Conread position: 73-376
Cow position: chr6:24962238-24961932 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 90

Conread position: 73-468
Cow position: chr6:9323237-9322835 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 26

Conread position: 75-289
Cow position: chr6:12829134-12829352 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 172
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 25, 107

Conread position: 85-276
Cow position: chr6:11192387-11192583 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 126, 151

Conread position: 85-467
Cow position: chr6:607337-606958 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 8

Conread position: 86-468
Cow position: chr6:18961439-18961825 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 71

Conread position: 86-471
Cow position: chr6:44099163-44098780 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 55

Conread position: 88-366
Cow position: chr6:48425250-48425524 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 205
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 123, 47

Conread position: 89-390
Cow position: chr6:21542396-21542093 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 191

Conread position: 89-468
Cow position: chr6:67045025-67044666 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 46

Conread position: 89-471
Cow position: chr6:44371872-44372246 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 45

Conread position: 92-468
Cow position: chr6:12623538-12623166 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 29

Conread position: 94-383
Cow position: chr6:10254309-10254022 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 211
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 117, 41

Conread position: 94-391
Cow position: chr6:7824834-7824535 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 36

Conread position: 97-240
Cow position: chr6:63168930-63169083 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 97-447
Cow position: chr6:48806928-48807277 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 252
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 13, 28

Conread position: 97-465
Cow position: chr6:16411254-16410894 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 24

Conread position: 98-306
Cow position: chr6:44757099-44756895 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 6, 45

Conread position: 98-370
Cow position: chr6:61137439-61137158 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 212
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 113, 60

Conread position: 99-227
Cow position: chr6:31228826-31228700 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 101-285
Cow position: chr6:38234020-38233834 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 109, 40

Conread position: 101-425
Cow position: chr6:54294163-54293849 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 40

Conread position: 102-383
Cow position: chr6:34031721-34031448 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 43

Conread position: 106-386
Cow position: chr6:49685641-49685362 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 97, 51

Conread position: 107-367
Cow position: chr6:416161-415891 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 51, 46

Conread position: 108-359
Cow position: chr6:53731578-53731325 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 194
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 97, 46

Conread position: 109-468
Cow position: chr6:20230773-20231130 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 30

Conread position: 109-471
Cow position: chr6:60456882-60456523 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 144

Conread position: 111-384
Cow position: chr6:20172277-20172000 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 187
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 101, 186

Conread position: 111-390
Cow position: chr6:25773334-25773608 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 164

Conread position: 111-461
Cow position: chr6:58173236-58172890 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 35

Conread position: 111-471
Cow position: chr6:23986694-23987045 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 28

Conread position: 113-452
Cow position: chr6:62479111-62479454 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 160

Conread position: 115-339
Cow position: chr6:49604723-49604507 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 18

Conread position: 115-342
Cow position: chr6:18968733-18968952 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 96, 26

Conread position: 115-465
Cow position: chr6:22877109-22877456 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 42

Conread position: 115-468
Cow position: chr6:3936599-3936242 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 45

Conread position: 116-380
Cow position: chr6:48344379-48344111 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 19

Conread position: 122-390
Cow position: chr6:24917681-24917934 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 58, 11

Conread position: 123-338
Cow position: chr6:9839211-9838987 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 88, 38

Conread position: 124-330
Cow position: chr6:58363970-58364179 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 87, 155

Conread position: 134-392
Cow position: chr6:10423198-10422945 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 187
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 35, 102

Conread position: 141-442
Cow position: chr6:2832852-2833154 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 69, 15

Conread position: 142-324
Cow position: chr6:633334-633522 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 9, 16

Conread position: 143-375
Cow position: chr6:13592728-13592498 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 70, 0

Conread position: 146-468
Cow position: chr6:24902126-24902442 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 25

Conread position: 147-374
Cow position: chr6:46400394-46400616 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 9

Conread position: 148-413
Cow position: chr6:53711132-53710866 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 92

Conread position: 150-365
Cow position: chr6:8187502-8187721 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 10, 109

Conread position: 151-362
Cow position: chr6:33277057-33276840 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 60, 167

Conread position: 154-384
Cow position: chr6:10636186-10635956 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 187
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 53, 143

Conread position: 156-397
Cow position: chr6:39994452-39994695 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 236

Conread position: 158-378
Cow position: chr6:30786148-30786363 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 51, 71

Conread position: 158-471
Cow position: chr6:33851790-33852091 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 223
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 53, 74

Conread position: 161-381
Cow position: chr6:15922995-15923215 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 117

Conread position: 162-465
Cow position: chr6:32210625-32210931 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 135

Conread position: 162-471
Cow position: chr6:2013022-2012711 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 116

Conread position: 179-471
Cow position: chr6:55607831-55608114 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 80

Conread position: 181-316
Cow position: chr6:18904364-18904495 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 192-408
Cow position: chr6:1002266-1002479 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 99

Conread position: 204-367
Cow position: chr6:88949-89113 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 132
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 151, 0

Show alignments to all cow chromosomes.