Cow genome map
| Conread name: | Ova1-OVRM10188E11 |
| Conread position: | 458-649 |
| Cow position: | chr1:81924833-81924635 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 86, 7 |
| Conread position: | 459-605 |
| Cow position: | chr1:33310331-33310195 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 459-635 |
| Cow position: | chr1:75379538-75379712 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 83, 20 |
| Conread position: | 459-639 |
| Cow position: | chr1:3954328-3954148 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 89, 20 |
| Conread position: | 459-660 |
| Cow position: | chr1:49961913-49961714 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 89, 51 |
| Conread position: | 459-660 |
| Cow position: | chr1:99858210-99858416 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 85, 32 |
| Conread position: | 459-667 |
| Cow position: | chr1:24241022-24240810 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 89, 125 |
| Conread position: | 459-668 |
| Cow position: | chr1:18484472-18484263 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 87, 39 |
| Conread position: | 459-668 |
| Cow position: | chr1:52085474-52085266 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 166 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 158, 14 |
| Conread position: | 459-668 |
| Cow position: | chr1:53703767-53703560 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 51 |
| Conread position: | 459-668 |
| Cow position: | chr1:65073740-65073529 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 88, 110 |
| Conread position: | 460-626 |
| Cow position: | chr1:55682031-55681867 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 460-660 |
| Cow position: | chr1:25835409-25835603 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 88, 149 |
| Conread position: | 462-668 |
| Cow position: | chr1:33441756-33441545 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 79, 40 |
| Conread position: | 462-668 |
| Cow position: | chr1:84778144-84778353 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 127 |
| Conread position: | 463-660 |
| Cow position: | chr1:13245781-13245589 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 143, 37 |
| Conread position: | 463-660 |
| Cow position: | chr1:33131777-33131578 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 465-605 |
| Cow position: | chr1:88647974-88647839 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 465-660 |
| Cow position: | chr1:50272592-50272387 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 72, 54 |
| Conread position: | 465-660 |
| Cow position: | chr1:72791175-72791371 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 79, 33 |
| Conread position: | 465-667 |
| Cow position: | chr1:21932733-21932534 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 76, 37 |
| Conread position: | 465-667 |
| Cow position: | chr1:79915506-79915715 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 465-668 |
| Cow position: | chr1:1743304-1743096 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 44, 37 |
| Conread position: | 465-668 |
| Cow position: | chr1:45858754-45858952 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 164 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 466-660 |
| Cow position: | chr1:41732097-41731900 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 467-605 |
| Cow position: | chr1:34854975-34855113 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 11, 31 |
| Conread position: | 467-663 |
| Cow position: | chr1:55050353-55050540 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 152, 35 |
| Conread position: | 468-604 |
| Cow position: | chr1:2585038-2585178 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 468-660 |
| Cow position: | chr1:58690772-58690960 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 46 |
| Conread position: | 471-660 |
| Cow position: | chr1:46398174-46398362 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 72, 42 |
| Conread position: | 473-668 |
| Cow position: | chr1:52578688-52578871 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 484-659 |
| Cow position: | chr1:58194874-58194696 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 28, 10 |
| Conread position: | 487-611 |
| Cow position: | chr1:52066191-52066315 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 57, 92 |
| Conread position: | 495-646 |
| Cow position: | chr1:71146935-71146777 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 498-667 |
| Cow position: | chr1:6717397-6717224 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 500-667 |
| Cow position: | chr1:32607716-32607888 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 510-666 |
| Cow position: | chr1:79465998-79466158 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 27, 77 |
| Conread position: | 513-664 |
| Cow position: | chr1:92661706-92661556 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 89, 11 |
| Conread position: | 538-660 |
| Cow position: | chr1:67519962-67519837 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 538-668 |
| Cow position: | chr1:16299415-16299546 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 28, 81 |
| Conread position: | 538-668 |
| Cow position: | chr1:64973950-64974083 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 538-668 |
| Cow position: | chr1:97538085-97538224 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 539-668 |
| Cow position: | chr1:12884521-12884391 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 553-668 |
| Cow position: | chr1:62301588-62301473 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 554-668 |
| Cow position: | chr1:91043345-91043460 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 48, 75 |
Show alignments to all cow chromosomes.