Cow genome map
| Conread name: | Ova1-OVRM10188E11 |
| Conread position: | 456-667 |
| Cow position: | chr11:64083067-64083272 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 78, 9 |
| Conread position: | 458-668 |
| Cow position: | chr11:21886592-21886371 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 92, 171 |
| Conread position: | 459-639 |
| Cow position: | chr11:56396348-56396171 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 35, 52 |
| Conread position: | 459-660 |
| Cow position: | chr11:32317390-32317190 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 151, 35 |
| Conread position: | 459-668 |
| Cow position: | chr11:25379587-25379375 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 81, 111 |
| Conread position: | 459-668 |
| Cow position: | chr11:44244132-44243926 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 77, 39 |
| Conread position: | 459-668 |
| Cow position: | chr11:55354418-55354213 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 55, 134 |
| Conread position: | 461-664 |
| Cow position: | chr11:83763812-83764016 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 87, 112 |
| Conread position: | 465-605 |
| Cow position: | chr11:18891211-18891349 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 465-627 |
| Cow position: | chr11:45430319-45430481 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 69, 91 |
| Conread position: | 465-660 |
| Cow position: | chr11:38355050-38355252 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 158 |
| Conread position: | 465-666 |
| Cow position: | chr11:21525420-21525612 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 465-666 |
| Cow position: | chr11:29014361-29014566 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 162 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 465-668 |
| Cow position: | chr11:61754155-61754351 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 465-668 |
| Cow position: | chr11:80003004-80003213 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 167 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 76, 204 |
| Conread position: | 466-668 |
| Cow position: | chr11:81278602-81278816 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 27 |
| Conread position: | 468-638 |
| Cow position: | chr11:54264986-54265159 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 72, 110 |
| Conread position: | 469-668 |
| Cow position: | chr11:40050166-40049968 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 133, 32 |
| Conread position: | 471-661 |
| Cow position: | chr11:48930448-48930262 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 73, 107 |
| Conread position: | 471-667 |
| Cow position: | chr11:42682694-42682498 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 86, 68 |
| Conread position: | 488-660 |
| Cow position: | chr11:3680929-3680754 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 490-664 |
| Cow position: | chr11:53270531-53270354 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 54, 83 |
| Conread position: | 492-668 |
| Cow position: | chr11:86925337-86925153 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 497-667 |
| Cow position: | chr11:50134170-50133999 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 44, 113 |
| Conread position: | 500-667 |
| Cow position: | chr11:9063226-9063053 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 510-667 |
| Cow position: | chr11:60008214-60008375 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 39, 118 |
| Conread position: | 514-660 |
| Cow position: | chr11:31126257-31126404 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 515-657 |
| Cow position: | chr11:54668832-54668980 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 548-646 |
| Cow position: | chr11:14266127-14266227 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
Show alignments to all cow chromosomes.