Cow genome map
| Conread name: | Ova1-OVRM10188E11 |
| Conread position: | 455-660 |
| Cow position: | chrX:21206137-21205936 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 11, 91 |
| Conread position: | 455-668 |
| Cow position: | chrX:4794184-4793974 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 9, 40 |
| Conread position: | 457-620 |
| Cow position: | chrX:29573574-29573737 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 87, 45 |
| Conread position: | 459-667 |
| Cow position: | chrX:35695264-35695476 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 85, 6 |
| Conread position: | 459-667 |
| Cow position: | chrX:37139615-37139824 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 164 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 148, 193 |
| Conread position: | 459-668 |
| Cow position: | chrX:4629680-4629467 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 82, 174 |
| Conread position: | 459-668 |
| Cow position: | chrX:40142223-40142011 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 89, 192 |
| Conread position: | 460-605 |
| Cow position: | chrX:32773621-32773475 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 460-638 |
| Cow position: | chrX:5648154-5647972 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 460-660 |
| Cow position: | chrX:6380828-6381022 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 83, 5 |
| Conread position: | 460-668 |
| Cow position: | chrX:4424974-4425187 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 460-668 |
| Cow position: | chrX:25824286-25824076 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 94, 5 |
| Conread position: | 463-668 |
| Cow position: | chrX:37873188-37873383 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 36 |
| Conread position: | 465-605 |
| Cow position: | chrX:20505025-20505166 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 90 |
| Conread position: | 465-633 |
| Cow position: | chrX:8827526-8827359 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 79, 147 |
| Conread position: | 465-664 |
| Cow position: | chrX:34865836-34865637 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 78, 34 |
| Conread position: | 465-666 |
| Cow position: | chrX:263808-263602 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 52 |
| Conread position: | 465-667 |
| Cow position: | chrX:19210389-19210193 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 36, 21 |
| Conread position: | 465-668 |
| Cow position: | chrX:10462636-10462843 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 166 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 76, 164 |
| Conread position: | 468-668 |
| Cow position: | chrX:12811069-12811269 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 74, 64 |
| Conread position: | 468-668 |
| Cow position: | chrX:17200722-17200926 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 468-668 |
| Cow position: | chrX:46372737-46372532 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 75, 22 |
| Conread position: | 484-646 |
| Cow position: | chrX:46907042-46906881 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 65, 16 |
| Conread position: | 484-659 |
| Cow position: | chrX:17265068-17264897 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 484-668 |
| Cow position: | chrX:25707801-25707621 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 61, 153 |
| Conread position: | 525-660 |
| Cow position: | chrX:15844161-15844020 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 547-668 |
| Cow position: | chrX:19093947-19093825 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
Show alignments to all cow chromosomes.