Cow genome map

Conread name: Ova1-OVRM10196B05

Conread position: 7-374
Cow position: chr10:31523524-31523881 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 94

Conread position: 7-435
Cow position: chr10:42747773-42748217 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 305
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 46, 42

Conread position: 7-455
Cow position: chr10:60489341-60489801 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 185

Conread position: 7-495
Cow position: chr10:4499386-4499868 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 105

Conread position: 7-532
Cow position: chr10:276263-276814 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 491

Conread position: 7-611
Cow position: chr10:62216277-62216922 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 218

Conread position: 7-630
Cow position: chr10:29695917-29696566 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 108

Conread position: 7-632
Cow position: chr10:25498025-25498688 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 195

Conread position: 7-694
Cow position: chr10:38546549-38545825 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 527

Conread position: 7-723
Cow position: chr10:14859654-14860394 (view UCSC Genome Browser custom track)
Alignm length: 749
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 347

Conread position: 7-723
Cow position: chr10:34318587-34317870 (view UCSC Genome Browser custom track)
Alignm length: 741
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 179

Conread position: 7-723
Cow position: chr10:38847045-38847772 (view UCSC Genome Browser custom track)
Alignm length: 744
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 18

Conread position: 7-725
Cow position: chr10:21901512-21900790 (view UCSC Genome Browser custom track)
Alignm length: 750
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 42

Conread position: 7-732
Cow position: chr10:46191058-46191791 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 101

Conread position: 8-304
Cow position: chr10:61297005-61297313 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 225
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 26, 34

Conread position: 8-360
Cow position: chr10:8328621-8328284 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 97

Conread position: 8-613
Cow position: chr10:10478459-10477819 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 67

Conread position: 8-631
Cow position: chr10:62778013-62778684 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 537

Conread position: 8-723
Cow position: chr10:49310211-49310916 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 77

Conread position: 9-351
Cow position: chr10:37060602-37060957 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 244
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 22, 254

Conread position: 9-432
Cow position: chr10:29846938-29846485 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 415

Conread position: 9-569
Cow position: chr10:38538818-38538231 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 178

Conread position: 9-609
Cow position: chr10:7283011-7282374 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 412

Conread position: 9-627
Cow position: chr10:25359074-25359731 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 430

Conread position: 9-638
Cow position: chr10:32650413-32651076 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 96

Conread position: 9-722
Cow position: chr10:42628347-42629051 (view UCSC Genome Browser custom track)
Alignm length: 741
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 64

Conread position: 10-627
Cow position: chr10:1375209-1375865 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 406

Conread position: 14-710
Cow position: chr10:24299168-24298442 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 60

Conread position: 15-323
Cow position: chr10:55092787-55093116 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 220
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 15-613
Cow position: chr10:21400989-21400354 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 401

Conread position: 15-613
Cow position: chr10:41876601-41877235 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 24

Conread position: 15-613
Cow position: chr10:47906460-47907095 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 189

Conread position: 26-507
Cow position: chr10:42663928-42664396 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 122

Conread position: 29-648
Cow position: chr10:16475462-16476110 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 413
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 47, 17

Conread position: 32-569
Cow position: chr10:53363690-53364223 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 366
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 25, 162

Conread position: 39-613
Cow position: chr10:14803542-14804153 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 9

Conread position: 41-651
Cow position: chr10:4192504-4191869 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 7

Conread position: 45-450
Cow position: chr10:39881559-39881117 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 299
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 5

Conread position: 45-613
Cow position: chr10:124030-124627 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 56

Conread position: 45-633
Cow position: chr10:19511319-19511945 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 105

Conread position: 45-648
Cow position: chr10:38345651-38345009 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 375

Conread position: 45-665
Cow position: chr10:22100953-22101601 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 233

Conread position: 46-336
Cow position: chr10:10581386-10581691 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 221
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 38, 0

Conread position: 46-568
Cow position: chr10:19143625-19143076 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 489

Conread position: 46-569
Cow position: chr10:24978421-24977877 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 371

Conread position: 46-613
Cow position: chr10:62409139-62408540 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 241

Conread position: 46-627
Cow position: chr10:21486629-21487247 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 232

Conread position: 46-627
Cow position: chr10:37769535-37770153 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 374

Conread position: 46-627
Cow position: chr10:39041592-39040970 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 305

Conread position: 47-346
Cow position: chr10:20383809-20383516 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 220
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 156, 21

Conread position: 47-453
Cow position: chr10:19839874-19840298 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 81

Conread position: 47-506
Cow position: chr10:54059632-54059156 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 110

Conread position: 47-569
Cow position: chr10:29633144-29632601 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 24

Conread position: 47-613
Cow position: chr10:280906-280304 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 278

Conread position: 47-613
Cow position: chr10:11685946-11685354 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 151

Conread position: 47-613
Cow position: chr10:21741035-21740435 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 155

Conread position: 47-613
Cow position: chr10:25565525-25564941 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 140

Conread position: 47-613
Cow position: chr10:41157170-41157764 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 95

Conread position: 47-616
Cow position: chr10:39179507-39180103 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 54

Conread position: 47-632
Cow position: chr10:32578017-32578625 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 317

Conread position: 47-632
Cow position: chr10:41566822-41567439 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 157

Conread position: 47-632
Cow position: chr10:51952888-51952285 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 147

Conread position: 47-632
Cow position: chr10:57559833-57559199 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 122

Conread position: 47-638
Cow position: chr10:34685610-34686237 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 364

Conread position: 50-651
Cow position: chr10:39817628-39817006 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 308

Conread position: 91-568
Cow position: chr10:24314062-24313575 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 103

Conread position: 123-480
Cow position: chr10:21518534-21518177 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 259
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 57, 33

Conread position: 128-610
Cow position: chr10:13366050-13365556 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 235

Conread position: 128-651
Cow position: chr10:19496474-19495929 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 119

Conread position: 138-627
Cow position: chr10:8289796-8290310 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 273

Conread position: 159-383
Cow position: chr10:65307957-65308199 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 168-629
Cow position: chr10:14928491-14928952 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 317
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 12, 147

Conread position: 179-702
Cow position: chr10:44294698-44295242 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 126

Conread position: 182-698
Cow position: chr10:38404646-38404117 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 341
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 67, 34

Conread position: 191-723
Cow position: chr10:10415299-10415815 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 91

Conread position: 192-722
Cow position: chr10:15862265-15861705 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 219

Conread position: 205-619
Cow position: chr10:39854132-39853686 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 214-352
Cow position: chr10:28932453-28932313 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 217-488
Cow position: chr10:66176006-66175727 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 190
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 53

Conread position: 219-627
Cow position: chr10:16925431-16925867 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 191

Conread position: 232-629
Cow position: chr10:46694465-46694046 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 292

Conread position: 243-661
Cow position: chr10:38526846-38527267 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 281
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 16

Conread position: 249-627
Cow position: chr10:2123336-2122930 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 160

Conread position: 269-528
Cow position: chr10:11820299-11820555 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 179
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 126, 70

Conread position: 282-689
Cow position: chr10:40751616-40752041 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 292
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 79, 15

Conread position: 311-564
Cow position: chr10:55093245-55093496 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 45, 7

Conread position: 311-632
Cow position: chr10:40152451-40152116 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 241
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 35, 7

Conread position: 317-723
Cow position: chr10:20371964-20371550 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 71

Conread position: 345-627
Cow position: chr10:10581829-10582135 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 46, 78

Conread position: 346-721
Cow position: chr10:33346639-33347026 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 45

Conread position: 351-559
Cow position: chr10:28931982-28931774 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 62, 43

Conread position: 353-610
Cow position: chr10:19758396-19758662 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 60, 38

Conread position: 373-723
Cow position: chr10:8328209-8327845 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 144

Conread position: 423-722
Cow position: chr10:31523914-31524226 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 39, 56

Conread position: 433-569
Cow position: chr10:47157073-47157210 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 79

Conread position: 470-723
Cow position: chr10:22842914-22843180 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 52, 21

Conread position: 497-722
Cow position: chr10:54979280-54979044 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 72, 13

Conread position: 568-722
Cow position: chr10:8339168-8339323 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 131
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 45, 31

Conread position: 569-722
Cow position: chr10:60489867-60490022 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 46, 21

Show alignments to all cow chromosomes.