Cow genome map


           Conread name:
           Ova1-OVRM10196B05
        

               Conread position:
               7-374
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 94
               

               Conread position:
               7-435
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               305
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               46, 42
               

               Conread position:
               7-455
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 185
               

               Conread position:
               7-495
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 105
               

               Conread position:
               7-532
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 491
               

               Conread position:
               7-611
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 218
               

               Conread position:
               7-630
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 108
               

               Conread position:
               7-632
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 195
               

               Conread position:
               7-694
               

               Cow position:
               
               

               Alignm length:
               727
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 527
               

               Conread position:
               7-723
               

               Cow position:
               
               

               Alignm length:
               749
               

               Alignm identity:
               541
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 347
               

               Conread position:
               7-723
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 179
               

               Conread position:
               7-723
               

               Cow position:
               
               

               Alignm length:
               744
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 18
               

               Conread position:
               7-725
               

               Cow position:
               
               

               Alignm length:
               750
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 42
               

               Conread position:
               7-732
               

               Cow position:
               
               

               Alignm length:
               757
               

               Alignm identity:
               561
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 101
               

               Conread position:
               8-304
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               225
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               26, 34
               

               Conread position:
               8-360
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 97
               

               Conread position:
               8-613
               

               Cow position:
               
               

               Alignm length:
               655
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 67
               

               Conread position:
               8-631
               

               Cow position:
               
               

               Alignm length:
               674
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 537
               

               Conread position:
               8-723
               

               Cow position:
               
               

               Alignm length:
               738
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 77
               

               Conread position:
               9-351
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               22, 254
               

               Conread position:
               9-432
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 415
               

               Conread position:
               9-569
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 178
               

               Conread position:
               9-609
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 412
               

               Conread position:
               9-627
               

               Cow position:
               
               

               Alignm length:
               660
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 430
               

               Conread position:
               9-638
               

               Cow position:
               
               

               Alignm length:
               667
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 96
               

               Conread position:
               9-722
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 64
               

               Conread position:
               10-627
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 406
               

               Conread position:
               14-710
               

               Cow position:
               
               

               Alignm length:
               732
               

               Alignm identity:
               558
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 60
               

               Conread position:
               15-323
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               15-613
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 401
               

               Conread position:
               15-613
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 24
               

               Conread position:
               15-613
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 189
               

               Conread position:
               26-507
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 122
               

               Conread position:
               29-648
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               413
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               47, 17
               

               Conread position:
               32-569
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               366
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               25, 162
               

               Conread position:
               39-613
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 9
               

               Conread position:
               41-651
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 7
               

               Conread position:
               45-450
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               299
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               41, 5
               

               Conread position:
               45-613
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 56
               

               Conread position:
               45-633
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 105
               

               Conread position:
               45-648
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 375
               

               Conread position:
               45-665
               

               Cow position:
               
               

               Alignm length:
               659
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 233
               

               Conread position:
               46-336
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               221
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               46-568
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 489
               

               Conread position:
               46-569
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 371
               

               Conread position:
               46-613
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 241
               

               Conread position:
               46-627
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 232
               

               Conread position:
               46-627
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 374
               

               Conread position:
               46-627
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 305
               

               Conread position:
               47-346
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               156, 21
               

               Conread position:
               47-453
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 81
               

               Conread position:
               47-506
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 110
               

               Conread position:
               47-569
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 24
               

               Conread position:
               47-613
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 278
               

               Conread position:
               47-613
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 151
               

               Conread position:
               47-613
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 155
               

               Conread position:
               47-613
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 140
               

               Conread position:
               47-613
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 95
               

               Conread position:
               47-616
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 54
               

               Conread position:
               47-632
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 317
               

               Conread position:
               47-632
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 157
               

               Conread position:
               47-632
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 147
               

               Conread position:
               47-632
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 122
               

               Conread position:
               47-638
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 364
               

               Conread position:
               50-651
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 308
               

               Conread position:
               91-568
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 103
               

               Conread position:
               123-480
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               259
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               57, 33
               

               Conread position:
               128-610
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 235
               

               Conread position:
               128-651
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 119
               

               Conread position:
               138-627
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 273
               

               Conread position:
               159-383
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               168-629
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               317
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               12, 147
               

               Conread position:
               179-702
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 126
               

               Conread position:
               182-698
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               341
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               67, 34
               

               Conread position:
               191-723
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 91
               

               Conread position:
               192-722
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 219
               

               Conread position:
               205-619
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               214-352
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               217-488
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 53
               

               Conread position:
               219-627
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 191
               

               Conread position:
               232-629
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 292
               

               Conread position:
               243-661
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               281
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               36, 16
               

               Conread position:
               249-627
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 160
               

               Conread position:
               269-528
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               126, 70
               

               Conread position:
               282-689
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               292
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               79, 15
               

               Conread position:
               311-564
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               45, 7
               

               Conread position:
               311-632
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               241
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               35, 7
               

               Conread position:
               317-723
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 71
               

               Conread position:
               345-627
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               46, 78
               

               Conread position:
               346-721
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 45
               

               Conread position:
               351-559
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               62, 43
               

               Conread position:
               353-610
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               60, 38
               

               Conread position:
               373-723
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 144
               

               Conread position:
               423-722
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               228
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               39, 56
               

               Conread position:
               433-569
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               23, 79
               

               Conread position:
               470-723
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               52, 21
               

               Conread position:
               497-722
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               72, 13
               

               Conread position:
               568-722
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               45, 31
               

               Conread position:
               569-722
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               46, 21
               
Show alignments to all cow chromosomes.