Cow genome map
| Conread name: | Ova1-OVRM10196B05 |
| Conread position: | 1-353 |
| Cow position: | chr12:48404639-48405004 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 200 |
| Conread position: | 1-632 |
| Cow position: | chr12:32653136-32653806 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 206 |
| Conread position: | 7-501 |
| Cow position: | chr12:1137190-1137704 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 146 |
| Conread position: | 7-569 |
| Cow position: | chr12:21901548-21902124 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 95 |
| Conread position: | 7-654 |
| Cow position: | chr12:2282143-2282830 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 57 |
| Conread position: | 8-722 |
| Cow position: | chr12:15951657-15950917 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 181 |
| Conread position: | 9-356 |
| Cow position: | chr12:22026355-22026714 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 36, 192 |
| Conread position: | 9-569 |
| Cow position: | chr12:22332216-22332811 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 518 |
| Conread position: | 9-613 |
| Cow position: | chr12:14663013-14662391 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 218 |
| Conread position: | 14-648 |
| Cow position: | chr12:6407041-6406374 (view UCSC Genome Browser custom track) |
| Alignm length: | 671 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 404 |
| Conread position: | 34-731 |
| Cow position: | chr12:21499752-21500461 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 7 |
| Conread position: | 35-303 |
| Cow position: | chr12:22255394-22255670 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 48, 56 |
| Conread position: | 37-336 |
| Cow position: | chr12:21197461-21197770 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 67, 160 |
| Conread position: | 41-627 |
| Cow position: | chr12:252425-251801 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 240 |
| Conread position: | 41-627 |
| Cow position: | chr12:27933314-27932688 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 380 |
| Conread position: | 45-627 |
| Cow position: | chr12:1402130-1402747 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 157 |
| Conread position: | 45-627 |
| Cow position: | chr12:42860178-42859570 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 249 |
| Conread position: | 45-632 |
| Cow position: | chr12:21426340-21426956 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 150 |
| Conread position: | 45-665 |
| Cow position: | chr12:28766379-28765724 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 56 |
| Conread position: | 45-686 |
| Cow position: | chr12:11097878-11098556 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 370 |
| Conread position: | 45-686 |
| Cow position: | chr12:22206108-22205434 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 382 |
| Conread position: | 46-686 |
| Cow position: | chr12:8678481-8677807 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 154 |
| Conread position: | 47-530 |
| Cow position: | chr12:26141452-26141962 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 364 |
| Conread position: | 47-532 |
| Cow position: | chr12:347488-347979 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 339 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 238, 9 |
| Conread position: | 47-613 |
| Cow position: | chr12:37558198-37558798 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 155 |
| Conread position: | 47-613 |
| Cow position: | chr12:43031737-43031143 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 362 |
| Conread position: | 47-633 |
| Cow position: | chr12:21255016-21254393 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 350 |
| Conread position: | 47-650 |
| Cow position: | chr12:3360552-3361185 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 54 |
| Conread position: | 50-613 |
| Cow position: | chr12:8310826-8311423 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 483 |
| Conread position: | 52-613 |
| Cow position: | chr12:20998477-20997891 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 361 |
| Conread position: | 59-627 |
| Cow position: | chr12:2449-3056 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 479 |
| Conread position: | 90-627 |
| Cow position: | chr12:25101369-25100804 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 104 |
| Conread position: | 95-574 |
| Cow position: | chr12:21207392-21207886 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 99 |
| Conread position: | 95-613 |
| Cow position: | chr12:45261301-45261865 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 294 |
| Conread position: | 95-645 |
| Cow position: | chr12:21941474-21942045 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 85 |
| Conread position: | 129-528 |
| Cow position: | chr12:8982685-8982278 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 56 |
| Conread position: | 181-595 |
| Cow position: | chr12:26947198-26946761 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 174 |
| Conread position: | 225-703 |
| Cow position: | chr12:3632427-3631934 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 340 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 11, 182 |
| Conread position: | 283-690 |
| Cow position: | chr12:18500941-18501347 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 29 |
| Conread position: | 345-665 |
| Cow position: | chr12:2838892-2838564 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 49 |
| Conread position: | 360-632 |
| Cow position: | chr12:21197935-21198223 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 54, 34 |
| Conread position: | 360-698 |
| Cow position: | chr12:48405248-48405577 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 25 |
| Conread position: | 379-651 |
| Cow position: | chr12:33986157-33986444 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 34, 134 |
| Conread position: | 440-651 |
| Cow position: | chr12:5861211-5861436 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 22, 71 |
Show alignments to all cow chromosomes.