Cow genome map
| Conread name: | Ova1-OVRM10196B05 |
| Conread position: | 5-693 |
| Cow position: | chr13:34936512-34937250 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 544 |
| Conread position: | 5-722 |
| Cow position: | chr13:20542989-20542244 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 134 |
| Conread position: | 7-295 |
| Cow position: | chr13:13046446-13046143 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 221 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 44, 194 |
| Conread position: | 7-370 |
| Cow position: | chr13:46732970-46732592 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 183 |
| Conread position: | 7-437 |
| Cow position: | chr13:34868146-34868606 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 426 |
| Conread position: | 7-449 |
| Cow position: | chr13:2232047-2232505 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 83 |
| Conread position: | 7-564 |
| Cow position: | chr13:30140368-30140956 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 322 |
| Conread position: | 7-613 |
| Cow position: | chr13:2909070-2908428 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 195 |
| Conread position: | 7-613 |
| Cow position: | chr13:3276533-3277175 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 382 |
| Conread position: | 7-613 |
| Cow position: | chr13:30657587-30656956 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 201 |
| Conread position: | 7-613 |
| Cow position: | chr13:33825363-33824714 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 204 |
| Conread position: | 7-638 |
| Cow position: | chr13:34143285-34142610 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 416 |
| Conread position: | 7-661 |
| Cow position: | chr13:33928172-33927517 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 12 |
| Conread position: | 7-710 |
| Cow position: | chr13:34767844-34767179 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 24 |
| Conread position: | 7-710 |
| Cow position: | chr13:54283969-54284685 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 137 |
| Conread position: | 9-627 |
| Cow position: | chr13:31612959-31612300 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 414 |
| Conread position: | 9-627 |
| Cow position: | chr13:34042987-34042333 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 409 |
| Conread position: | 13-609 |
| Cow position: | chr13:6668744-6668106 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 397 |
| Conread position: | 37-613 |
| Cow position: | chr13:32986637-32986036 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 11 |
| Conread position: | 40-613 |
| Cow position: | chr13:34326266-34325654 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 193 |
| Conread position: | 41-613 |
| Cow position: | chr13:31734659-31734064 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 7 |
| Conread position: | 42-645 |
| Cow position: | chr13:35756644-35757294 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 387 |
| Conread position: | 42-703 |
| Cow position: | chr13:30063571-30064225 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 66 |
| Conread position: | 43-613 |
| Cow position: | chr13:62328165-62327563 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 296 |
| Conread position: | 45-482 |
| Cow position: | chr13:30302488-30302944 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 113 |
| Conread position: | 45-613 |
| Cow position: | chr13:21840780-21840173 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 373 |
| Conread position: | 45-614 |
| Cow position: | chr13:34187272-34186665 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 359 |
| Conread position: | 45-627 |
| Cow position: | chr13:1593739-1593119 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 373 |
| Conread position: | 45-627 |
| Cow position: | chr13:3654890-3654288 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 366 |
| Conread position: | 45-627 |
| Cow position: | chr13:15924967-15924348 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 373 |
| Conread position: | 45-633 |
| Cow position: | chr13:15521098-15520472 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 373 |
| Conread position: | 46-551 |
| Cow position: | chr13:33336906-33336394 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 239 |
| Conread position: | 46-627 |
| Cow position: | chr13:9043928-9044536 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 147 |
| Conread position: | 46-709 |
| Cow position: | chr13:15080752-15080123 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 27 |
| Conread position: | 47-326 |
| Cow position: | chr13:3058575-3058280 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 47-504 |
| Cow position: | chr13:2297379-2296896 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 95 |
| Conread position: | 47-574 |
| Cow position: | chr13:30245316-30244762 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 370 |
| Conread position: | 47-613 |
| Cow position: | chr13:17307903-17308496 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 136 |
| Conread position: | 47-613 |
| Cow position: | chr13:34692581-34693186 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 101 |
| Conread position: | 47-613 |
| Cow position: | chr13:34911946-34911358 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 325 |
| Conread position: | 47-627 |
| Cow position: | chr13:4940504-4941124 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 147 |
| Conread position: | 47-628 |
| Cow position: | chr13:31832027-31832636 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 47-632 |
| Cow position: | chr13:50108884-50109503 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 155 |
| Conread position: | 47-633 |
| Cow position: | chr13:4872497-4873121 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 155 |
| Conread position: | 50-698 |
| Cow position: | chr13:60701845-60701201 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 407 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 72, 51 |
| Conread position: | 60-707 |
| Cow position: | chr13:11764758-11764140 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 420 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 120, 41 |
| Conread position: | 95-613 |
| Cow position: | chr13:2389320-2388797 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 84 |
| Conread position: | 95-627 |
| Cow position: | chr13:32738345-32737786 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 100 |
| Conread position: | 105-344 |
| Cow position: | chr13:47859937-47860178 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 138, 58 |
| Conread position: | 107-629 |
| Cow position: | chr13:31560679-31561226 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 55 |
| Conread position: | 124-616 |
| Cow position: | chr13:21130832-21131335 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 335 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 53, 23 |
| Conread position: | 126-651 |
| Cow position: | chr13:13324262-13324810 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 54 |
| Conread position: | 130-630 |
| Cow position: | chr13:56730764-56730248 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 20 |
| Conread position: | 160-510 |
| Cow position: | chr13:10115081-10114745 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 257 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 17, 38 |
| Conread position: | 165-666 |
| Cow position: | chr13:49973226-49973760 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 244 |
| Conread position: | 168-569 |
| Cow position: | chr13:22186172-22185773 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 276 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 84, 39 |
| Conread position: | 171-569 |
| Cow position: | chr13:23003966-23003550 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 250 |
| Conread position: | 181-612 |
| Cow position: | chr13:35030110-35030571 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 287 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 14, 173 |
| Conread position: | 256-616 |
| Cow position: | chr13:3567423-3567818 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 281 |
| Conread position: | 285-605 |
| Cow position: | chr13:47230304-47229974 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 240 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 71, 24 |
| Conread position: | 343-627 |
| Cow position: | chr13:4483544-4483830 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 67, 41 |
| Conread position: | 345-656 |
| Cow position: | chr13:46732480-46732163 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 27, 55 |
| Conread position: | 347-668 |
| Cow position: | chr13:4178908-4178569 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 25, 47 |
| Conread position: | 427-563 |
| Cow position: | chr13:30237941-30238078 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 35, 84 |
| Conread position: | 432-651 |
| Cow position: | chr13:60466165-60466398 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 36, 80 |
| Conread position: | 461-627 |
| Cow position: | chr13:32544918-32545095 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 110, 49 |
| Conread position: | 461-710 |
| Cow position: | chr13:34111155-34111403 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 90, 12 |
| Conread position: | 512-722 |
| Cow position: | chr13:15451647-15451431 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 62, 112 |
Show alignments to all cow chromosomes.