Cow genome map

Conread name: Ova1-OVRM10196B05

Conread position: 1-455
Cow position: chr14:31607676-31607202 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 1-473
Cow position: chr14:23529748-23529276 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 316
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 95, 49

Conread position: 1-648
Cow position: chr14:28994611-28993922 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 423

Conread position: 1-710
Cow position: chr14:47589122-47589860 (view UCSC Genome Browser custom track)
Alignm length: 747
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 93

Conread position: 1-722
Cow position: chr14:35387887-35387143 (view UCSC Genome Browser custom track)
Alignm length: 760
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 166

Conread position: 7-481
Cow position: chr14:44261840-44261338 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 341
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 55, 279

Conread position: 7-613
Cow position: chr14:44130178-44130810 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 42

Conread position: 7-627
Cow position: chr14:47623821-47624465 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 72

Conread position: 7-629
Cow position: chr14:44376689-44377351 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 232

Conread position: 7-630
Cow position: chr14:45712729-45712076 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 79

Conread position: 7-667
Cow position: chr14:44225667-44226346 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 200

Conread position: 7-668
Cow position: chr14:45850478-45851182 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 196

Conread position: 7-691
Cow position: chr14:36967508-36968239 (view UCSC Genome Browser custom track)
Alignm length: 741
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 232

Conread position: 7-723
Cow position: chr14:22018652-22019399 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 274

Conread position: 7-727
Cow position: chr14:46083879-46084633 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 125

Conread position: 8-697
Cow position: chr14:13326858-13326163 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 184

Conread position: 8-732
Cow position: chr14:41407113-41407834 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 97

Conread position: 9-506
Cow position: chr14:45079789-45080300 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 292

Conread position: 9-564
Cow position: chr14:41755127-41755681 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 141

Conread position: 9-613
Cow position: chr14:9044817-9045463 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 412

Conread position: 9-627
Cow position: chr14:19329014-19328356 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 197

Conread position: 9-661
Cow position: chr14:40170427-40169759 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 136

Conread position: 9-667
Cow position: chr14:44685300-44685994 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 189

Conread position: 9-703
Cow position: chr14:14309805-14309073 (view UCSC Genome Browser custom track)
Alignm length: 748
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 33

Conread position: 13-615
Cow position: chr14:13272519-13273147 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 144

Conread position: 13-616
Cow position: chr14:7831278-7830640 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 61

Conread position: 13-722
Cow position: chr14:40338970-40339691 (view UCSC Genome Browser custom track)
Alignm length: 741
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 186

Conread position: 15-632
Cow position: chr14:30585678-30585035 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 219

Conread position: 16-290
Cow position: chr14:34774857-34775143 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 203
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 35, 219

Conread position: 31-628
Cow position: chr14:42151611-42152236 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 6

Conread position: 32-629
Cow position: chr14:48406380-48405774 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 399
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 20, 84

Conread position: 35-611
Cow position: chr14:50109863-50110461 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 14

Conread position: 36-408
Cow position: chr14:44580223-44580599 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 274
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 13, 150

Conread position: 42-627
Cow position: chr14:5528356-5528974 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 157

Conread position: 42-627
Cow position: chr14:7471665-7472280 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 228

Conread position: 43-699
Cow position: chr14:47654051-47654723 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 75

Conread position: 45-234
Cow position: chr14:13778156-13778356 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 45-611
Cow position: chr14:44856133-44855532 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 364

Conread position: 45-627
Cow position: chr14:13302323-13302940 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 179

Conread position: 45-627
Cow position: chr14:16920390-16919778 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 176

Conread position: 45-627
Cow position: chr14:17684691-17685308 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 110

Conread position: 45-627
Cow position: chr14:48255020-48254393 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 355

Conread position: 45-631
Cow position: chr14:16274005-16273380 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 370

Conread position: 45-644
Cow position: chr14:37223194-37223830 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 358

Conread position: 46-627
Cow position: chr14:11154860-11154254 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 224

Conread position: 46-635
Cow position: chr14:20781752-20782377 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 379

Conread position: 47-426
Cow position: chr14:45160159-45160546 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 275
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 33, 265

Conread position: 47-611
Cow position: chr14:23690932-23690334 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 310

Conread position: 47-613
Cow position: chr14:749870-750467 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 363

Conread position: 47-613
Cow position: chr14:17492157-17491559 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 364

Conread position: 47-613
Cow position: chr14:22032388-22031790 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 240

Conread position: 47-613
Cow position: chr14:45672749-45672148 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 362

Conread position: 47-627
Cow position: chr14:44421852-44422466 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 224

Conread position: 47-673
Cow position: chr14:45767302-45767962 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 484

Conread position: 47-701
Cow position: chr14:35928476-35929162 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 147

Conread position: 50-613
Cow position: chr14:30597071-30596487 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 128

Conread position: 50-651
Cow position: chr14:29048597-29047966 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 148

Conread position: 51-613
Cow position: chr14:45205373-45205974 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 146

Conread position: 62-723
Cow position: chr14:12608528-12609190 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 81

Conread position: 88-691
Cow position: chr14:16845796-16846413 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 390
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 173, 35

Conread position: 90-626
Cow position: chr14:38532952-38532380 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 62

Conread position: 90-700
Cow position: chr14:27992940-27992320 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 71

Conread position: 91-632
Cow position: chr14:33394430-33393859 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 317

Conread position: 95-627
Cow position: chr14:17001705-17001147 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 317

Conread position: 95-632
Cow position: chr14:23256711-23257276 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 311

Conread position: 105-569
Cow position: chr14:13660627-13660150 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 296

Conread position: 108-682
Cow position: chr14:43552783-43553391 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 197

Conread position: 109-451
Cow position: chr14:33235367-33235706 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 237
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 127, 81

Conread position: 119-647
Cow position: chr14:45833539-45834088 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 8

Conread position: 129-722
Cow position: chr14:45303976-45303359 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 278

Conread position: 154-651
Cow position: chr14:45029704-45029187 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 125

Conread position: 165-610
Cow position: chr14:23901381-23900906 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 244

Conread position: 176-629
Cow position: chr14:47640581-47641054 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 315
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 58, 125

Conread position: 179-362
Cow position: chr14:1500468-1500654 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 153

Conread position: 179-613
Cow position: chr14:2283777-2284236 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 14

Conread position: 179-627
Cow position: chr14:15277143-15276668 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 230

Conread position: 179-633
Cow position: chr14:50134510-50134994 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 14

Conread position: 181-564
Cow position: chr14:48824053-48824420 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 273
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 16, 144

Conread position: 181-632
Cow position: chr14:46464509-46464990 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 348

Conread position: 193-702
Cow position: chr14:38146063-38146565 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 72

Conread position: 214-687
Cow position: chr14:31887150-31887653 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 332
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 39, 192

Conread position: 225-627
Cow position: chr14:13778450-13778867 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 142

Conread position: 241-616
Cow position: chr14:13864582-13864182 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 18

Conread position: 250-600
Cow position: chr14:41085274-41084915 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 259

Conread position: 259-627
Cow position: chr14:5201539-5201169 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 267
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 20, 81

Conread position: 277-616
Cow position: chr14:45916957-45917318 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 259
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 58, 8

Conread position: 285-616
Cow position: chr14:42123637-42123311 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 221
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 40

Conread position: 285-710
Cow position: chr14:37414341-37413900 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 116

Conread position: 300-609
Cow position: chr14:13480165-13479841 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 235
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 55, 81

Conread position: 308-667
Cow position: chr14:22242463-22242832 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 261
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 15, 79

Conread position: 321-711
Cow position: chr14:19619809-19620214 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 282
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 78

Conread position: 344-569
Cow position: chr14:44551502-44551724 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 65, 9

Conread position: 345-613
Cow position: chr14:44287633-44287353 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 65, 49

Conread position: 350-686
Cow position: chr14:5511445-5511791 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 241
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 60, 44

Conread position: 373-722
Cow position: chr14:44580608-44580956 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 253
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 196, 16

Conread position: 398-630
Cow position: chr14:45771105-45770864 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 187
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 64, 15

Conread position: 416-668
Cow position: chr14:45160786-45161049 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 52, 99

Conread position: 433-722
Cow position: chr14:33675517-33675821 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 5

Conread position: 457-708
Cow position: chr14:44777257-44777000 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 71

Show alignments to all cow chromosomes.