Cow genome map


           Conread name:
           Ova1-OVRM10196B05
        

               Conread position:
               5-627
               

               Cow position:
               
               

               Alignm length:
               667
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 418
               

               Conread position:
               7-425
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 68
               

               Conread position:
               7-562
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 194
               

               Conread position:
               7-613
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 127
               

               Conread position:
               7-613
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 25
               

               Conread position:
               7-627
               

               Cow position:
               
               

               Alignm length:
               661
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 147
               

               Conread position:
               7-630
               

               Cow position:
               
               

               Alignm length:
               681
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 320
               

               Conread position:
               7-721
               

               Cow position:
               
               

               Alignm length:
               764
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 167
               

               Conread position:
               7-722
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 20
               

               Conread position:
               7-723
               

               Cow position:
               
               

               Alignm length:
               755
               

               Alignm identity:
               551
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 28
               

               Conread position:
               8-723
               

               Cow position:
               
               

               Alignm length:
               758
               

               Alignm identity:
               563
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 238
               

               Conread position:
               9-613
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 412
               

               Conread position:
               9-613
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 237
               

               Conread position:
               9-613
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 84
               

               Conread position:
               9-627
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 147
               

               Conread position:
               15-569
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 295
               

               Conread position:
               15-574
               

               Cow position:
               
               

               Alignm length:
               594
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 418
               

               Conread position:
               15-609
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 402
               

               Conread position:
               15-613
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 190
               

               Conread position:
               15-632
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 176
               

               Conread position:
               20-632
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 169
               

               Conread position:
               25-207
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               25, 173
               

               Conread position:
               31-532
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               341
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               54, 299
               

               Conread position:
               32-651
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 18
               

               Conread position:
               38-481
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               59, 157
               

               Conread position:
               40-336
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               223
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               41-627
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 379
               

               Conread position:
               41-635
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 9
               

               Conread position:
               44-629
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 5
               

               Conread position:
               45-371
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               241
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               53, 219
               

               Conread position:
               45-393
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               254
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               39, 26
               

               Conread position:
               45-627
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 410
               

               Conread position:
               45-627
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 363
               

               Conread position:
               45-627
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 151
               

               Conread position:
               46-473
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 142
               

               Conread position:
               46-627
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 155
               

               Conread position:
               46-627
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 386
               

               Conread position:
               46-721
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 135
               

               Conread position:
               46-725
               

               Cow position:
               
               

               Alignm length:
               710
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 363
               

               Conread position:
               47-518
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 364
               

               Conread position:
               47-568
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 97
               

               Conread position:
               47-610
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 195
               

               Conread position:
               47-613
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 155
               

               Conread position:
               47-615
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 370
               

               Conread position:
               47-629
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 141
               

               Conread position:
               49-656
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 94
               

               Conread position:
               51-644
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 18
               

               Conread position:
               53-569
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 365
               

               Conread position:
               53-628
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 170
               

               Conread position:
               70-721
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 111
               

               Conread position:
               89-668
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 15
               

               Conread position:
               90-604
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 322
               

               Conread position:
               90-607
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 133
               

               Conread position:
               95-651
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 314
               

               Conread position:
               96-613
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 388
               

               Conread position:
               100-613
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 91
               

               Conread position:
               105-632
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 143
               

               Conread position:
               119-632
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 208
               

               Conread position:
               122-613
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 370
               

               Conread position:
               125-421
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               112, 82
               

               Conread position:
               148-456
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               5, 31
               

               Conread position:
               179-627
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 14
               

               Conread position:
               183-632
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 8
               

               Conread position:
               184-616
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 8
               

               Conread position:
               244-601
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 161
               

               Conread position:
               248-689
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 277
               

               Conread position:
               281-537
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               80, 121
               

               Conread position:
               302-665
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               256
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               29, 13
               

               Conread position:
               353-669
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               11, 42
               

               Conread position:
               376-648
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               213
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               20, 137
               

               Conread position:
               394-610
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               19, 119
               

               Conread position:
               398-635
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               12, 163
               

               Conread position:
               415-569
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               53, 97
               

               Conread position:
               431-693
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               30, 9
               
Show alignments to all cow chromosomes.