Cow genome map
| Conread name: | Ova1-OVRM10196B05 |
| Conread position: | 4-619 |
| Cow position: | chr18:51310273-51310927 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 232 |
| Conread position: | 7-346 |
| Cow position: | chr18:29763180-29763503 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 48, 63 |
| Conread position: | 7-356 |
| Cow position: | chr18:45958392-45958740 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 27 |
| Conread position: | 7-607 |
| Cow position: | chr18:51257672-51258314 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 259 |
| Conread position: | 7-610 |
| Cow position: | chr18:33335564-33336196 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 68 |
| Conread position: | 7-616 |
| Cow position: | chr18:47719880-47719244 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 195 |
| Conread position: | 7-619 |
| Cow position: | chr18:43147236-43146582 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 533 |
| Conread position: | 7-627 |
| Cow position: | chr18:23944682-23944023 (view UCSC Genome Browser custom track) |
| Alignm length: | 664 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 341 |
| Conread position: | 7-632 |
| Cow position: | chr18:39748273-39748935 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 479 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 193 |
| Conread position: | 7-633 |
| Cow position: | chr18:35335174-35335837 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 371 |
| Conread position: | 8-452 |
| Cow position: | chr18:17992871-17992401 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 323 |
| Conread position: | 9-711 |
| Cow position: | chr18:27838610-27837883 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 320 |
| Conread position: | 9-716 |
| Cow position: | chr18:36508024-36508771 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 410 |
| Conread position: | 13-200 |
| Cow position: | chr18:35287956-35288145 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 37, 109 |
| Conread position: | 15-365 |
| Cow position: | chr18:16078400-16078769 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 189 |
| Conread position: | 15-656 |
| Cow position: | chr18:47741715-47742400 (view UCSC Genome Browser custom track) |
| Alignm length: | 688 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 400 |
| Conread position: | 15-669 |
| Cow position: | chr18:55089228-55088532 (view UCSC Genome Browser custom track) |
| Alignm length: | 700 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 406 |
| Conread position: | 28-633 |
| Cow position: | chr18:44601253-44601873 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 126 |
| Conread position: | 34-710 |
| Cow position: | chr18:37599804-37599107 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 43 |
| Conread position: | 43-486 |
| Cow position: | chr18:9187033-9186568 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 227 |
| Conread position: | 45-408 |
| Cow position: | chr18:27986760-27987146 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 368 |
| Conread position: | 45-613 |
| Cow position: | chr18:41841094-41840488 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 375 |
| Conread position: | 45-627 |
| Cow position: | chr18:40478116-40478734 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 373 |
| Conread position: | 45-648 |
| Cow position: | chr18:16176875-16176246 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 179 |
| Conread position: | 45-651 |
| Cow position: | chr18:11275357-11274729 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 56 |
| Conread position: | 46-339 |
| Cow position: | chr18:32651728-32652036 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 38, 176 |
| Conread position: | 46-569 |
| Cow position: | chr18:54024623-54024078 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 153 |
| Conread position: | 46-623 |
| Cow position: | chr18:28974166-28973555 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 154 |
| Conread position: | 46-627 |
| Cow position: | chr18:14415711-14416327 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 156 |
| Conread position: | 46-627 |
| Cow position: | chr18:23797383-23797999 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 183 |
| Conread position: | 46-627 |
| Cow position: | chr18:37504798-37505415 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 155 |
| Conread position: | 46-627 |
| Cow position: | chr18:51480572-51481191 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 156 |
| Conread position: | 47-344 |
| Cow position: | chr18:51660157-51660463 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 218 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 47-446 |
| Cow position: | chr18:44621490-44621917 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 281 |
| Conread position: | 47-508 |
| Cow position: | chr18:18897245-18897716 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 121 |
| Conread position: | 47-509 |
| Cow position: | chr18:16660271-16659795 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 230 |
| Conread position: | 47-610 |
| Cow position: | chr18:22602220-22602821 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 364 |
| Conread position: | 47-613 |
| Cow position: | chr18:48221611-48222215 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 86 |
| Conread position: | 47-627 |
| Cow position: | chr18:2019946-2019335 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 72 |
| Conread position: | 47-647 |
| Cow position: | chr18:1520863-1521518 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 371 |
| Conread position: | 47-651 |
| Cow position: | chr18:33953834-33953198 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 94 |
| Conread position: | 51-718 |
| Cow position: | chr18:54172105-54171419 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 332 |
| Conread position: | 52-613 |
| Cow position: | chr18:33358606-33359202 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 367 |
| Conread position: | 74-532 |
| Cow position: | chr18:43200835-43201299 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 75-314 |
| Cow position: | chr18:37585894-37585648 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 29, 18 |
| Conread position: | 90-615 |
| Cow position: | chr18:19352170-19352724 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 318 |
| Conread position: | 95-667 |
| Cow position: | chr18:6869466-6868867 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 313 |
| Conread position: | 107-703 |
| Cow position: | chr18:16877287-16877891 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 85 |
| Conread position: | 115-635 |
| Cow position: | chr18:53785650-53786198 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 290 |
| Conread position: | 118-613 |
| Cow position: | chr18:54044889-54044386 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 328 |
| Conread position: | 121-613 |
| Cow position: | chr18:16533799-16534315 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 63 |
| Conread position: | 128-610 |
| Cow position: | chr18:51689449-51689958 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 29 |
| Conread position: | 157-722 |
| Cow position: | chr18:29236669-29237257 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 111 |
| Conread position: | 165-723 |
| Cow position: | chr18:2887164-2886571 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 366 |
| Conread position: | 167-344 |
| Cow position: | chr18:22869616-22869801 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 179-480 |
| Cow position: | chr18:35288404-35288729 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 18, 74 |
| Conread position: | 179-666 |
| Cow position: | chr18:51341563-51342077 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 14 |
| Conread position: | 241-613 |
| Cow position: | chr18:14130328-14130721 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 162 |
| Conread position: | 248-703 |
| Cow position: | chr18:36258411-36257927 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 317 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 33, 154 |
| Conread position: | 280-570 |
| Cow position: | chr18:114376-114672 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 48 |
| Conread position: | 280-613 |
| Cow position: | chr18:52650913-52651256 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 120 |
| Conread position: | 306-613 |
| Cow position: | chr18:24040713-24040395 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 50, 16 |
| Conread position: | 310-613 |
| Cow position: | chr18:19539558-19539248 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 224 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 46, 8 |
| Conread position: | 331-633 |
| Cow position: | chr18:16078760-16079078 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 232 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 20, 8 |
| Conread position: | 341-556 |
| Cow position: | chr18:25350718-25350934 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 69, 53 |
| Conread position: | 345-623 |
| Cow position: | chr18:32652277-32652550 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 32 |
| Conread position: | 352-723 |
| Cow position: | chr18:54269647-54270026 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 269 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 353-613 |
| Cow position: | chr18:51463010-51462742 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 60, 41 |
| Conread position: | 356-723 |
| Cow position: | chr18:16843268-16842891 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 38 |
| Conread position: | 365-568 |
| Cow position: | chr18:18089396-18089192 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 42, 48 |
| Conread position: | 394-627 |
| Cow position: | chr18:54003622-54003872 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 60, 126 |
| Conread position: | 416-569 |
| Cow position: | chr18:27987188-27987342 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 96 |
| Conread position: | 436-613 |
| Cow position: | chr18:17992273-17992084 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 26, 76 |
| Conread position: | 461-710 |
| Cow position: | chr18:29763545-29763800 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 96, 49 |
| Conread position: | 478-722 |
| Cow position: | chr18:56462711-56462460 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 91, 32 |
| Conread position: | 485-683 |
| Cow position: | chr18:51629645-51629845 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 24 |
| Conread position: | 570-699 |
| Cow position: | chr18:35289610-35289743 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
Show alignments to all cow chromosomes.