Cow genome map


           Conread name:
           Ova1-OVRM10196B05
        

               Conread position:
               4-619
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 232
               

               Conread position:
               7-346
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               48, 63
               

               Conread position:
               7-356
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 27
               

               Conread position:
               7-607
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 259
               

               Conread position:
               7-610
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 68
               

               Conread position:
               7-616
               

               Cow position:
               
               

               Alignm length:
               656
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 195
               

               Conread position:
               7-619
               

               Cow position:
               
               

               Alignm length:
               656
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 533
               

               Conread position:
               7-627
               

               Cow position:
               
               

               Alignm length:
               664
               

               Alignm identity:
               472
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 341
               

               Conread position:
               7-632
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 193
               

               Conread position:
               7-633
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 371
               

               Conread position:
               8-452
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 323
               

               Conread position:
               9-711
               

               Cow position:
               
               

               Alignm length:
               736
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 320
               

               Conread position:
               9-716
               

               Cow position:
               
               

               Alignm length:
               753
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 410
               

               Conread position:
               13-200
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               37, 109
               

               Conread position:
               15-365
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 189
               

               Conread position:
               15-656
               

               Cow position:
               
               

               Alignm length:
               688
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 400
               

               Conread position:
               15-669
               

               Cow position:
               
               

               Alignm length:
               700
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 406
               

               Conread position:
               28-633
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 126
               

               Conread position:
               34-710
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 43
               

               Conread position:
               43-486
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 227
               

               Conread position:
               45-408
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 368
               

               Conread position:
               45-613
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 375
               

               Conread position:
               45-627
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 373
               

               Conread position:
               45-648
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 179
               

               Conread position:
               45-651
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 56
               

               Conread position:
               46-339
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               38, 176
               

               Conread position:
               46-569
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 153
               

               Conread position:
               46-623
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 154
               

               Conread position:
               46-627
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 156
               

               Conread position:
               46-627
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 183
               

               Conread position:
               46-627
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 155
               

               Conread position:
               46-627
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 156
               

               Conread position:
               47-344
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               218
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               47-446
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 281
               

               Conread position:
               47-508
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 121
               

               Conread position:
               47-509
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 230
               

               Conread position:
               47-610
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 364
               

               Conread position:
               47-613
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 86
               

               Conread position:
               47-627
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 72
               

               Conread position:
               47-647
               

               Cow position:
               
               

               Alignm length:
               658
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 371
               

               Conread position:
               47-651
               

               Cow position:
               
               

               Alignm length:
               642
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 94
               

               Conread position:
               51-718
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 332
               

               Conread position:
               52-613
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 367
               

               Conread position:
               74-532
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 21
               

               Conread position:
               75-314
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               29, 18
               

               Conread position:
               90-615
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 318
               

               Conread position:
               95-667
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 313
               

               Conread position:
               107-703
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 85
               

               Conread position:
               115-635
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 290
               

               Conread position:
               118-613
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 328
               

               Conread position:
               121-613
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 63
               

               Conread position:
               128-610
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 29
               

               Conread position:
               157-722
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 111
               

               Conread position:
               165-723
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 366
               

               Conread position:
               167-344
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               179-480
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               18, 74
               

               Conread position:
               179-666
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 14
               

               Conread position:
               241-613
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 162
               

               Conread position:
               248-703
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               317
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               33, 154
               

               Conread position:
               280-570
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 48
               

               Conread position:
               280-613
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 120
               

               Conread position:
               306-613
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               233
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               50, 16
               

               Conread position:
               310-613
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               224
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               46, 8
               

               Conread position:
               331-633
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               232
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               20, 8
               

               Conread position:
               341-556
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               69, 53
               

               Conread position:
               345-623
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 32
               

               Conread position:
               352-723
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               269
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               353-613
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               60, 41
               

               Conread position:
               356-723
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 38
               

               Conread position:
               365-568
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               42, 48
               

               Conread position:
               394-627
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               60, 126
               

               Conread position:
               416-569
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               40, 96
               

               Conread position:
               436-613
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               26, 76
               

               Conread position:
               461-710
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               96, 49
               

               Conread position:
               478-722
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               91, 32
               

               Conread position:
               485-683
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               86, 24
               

               Conread position:
               570-699
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               39, 0
               
Show alignments to all cow chromosomes.