Cow genome map
| Conread name: | Ova1-OVRM10196B05 |
| Conread position: | 1-628 |
| Cow position: | chr19:76545-75912 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 157 |
| Conread position: | 4-613 |
| Cow position: | chr19:7488003-7488654 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 420 |
| Conread position: | 7-216 |
| Cow position: | chr19:6553101-6553309 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 57, 98 |
| Conread position: | 7-277 |
| Cow position: | chr19:42649372-42649097 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 55, 189 |
| Conread position: | 7-351 |
| Cow position: | chr19:4252664-4252303 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 353 |
| Conread position: | 7-407 |
| Cow position: | chr19:4533050-4532632 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 133 |
| Conread position: | 7-446 |
| Cow position: | chr19:29209260-29209721 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 155 |
| Conread position: | 7-506 |
| Cow position: | chr19:34116-34640 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 101 |
| Conread position: | 7-569 |
| Cow position: | chr19:39688243-39688813 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 127 |
| Conread position: | 7-613 |
| Cow position: | chr19:1031807-1032416 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 191 |
| Conread position: | 7-721 |
| Cow position: | chr19:15953570-15954285 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 98 |
| Conread position: | 8-508 |
| Cow position: | chr19:20125328-20125834 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 61 |
| Conread position: | 8-667 |
| Cow position: | chr19:32665227-32665918 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 228 |
| Conread position: | 9-499 |
| Cow position: | chr19:55078441-55078963 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 415 |
| Conread position: | 9-613 |
| Cow position: | chr19:40852735-40852097 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 407 |
| Conread position: | 15-216 |
| Cow position: | chr19:36477062-36477271 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 15-323 |
| Cow position: | chr19:52152548-52152232 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 33, 90 |
| Conread position: | 15-613 |
| Cow position: | chr19:772311-772940 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 90 |
| Conread position: | 15-613 |
| Cow position: | chr19:7341773-7342409 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 168 |
| Conread position: | 32-614 |
| Cow position: | chr19:28592998-28593605 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 467 |
| Conread position: | 35-731 |
| Cow position: | chr19:30754897-30755632 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 34 |
| Conread position: | 41-613 |
| Cow position: | chr19:43143448-43144057 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 7 |
| Conread position: | 41-651 |
| Cow position: | chr19:37640-38276 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 7 |
| Conread position: | 41-686 |
| Cow position: | chr19:39390253-39390921 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 120 |
| Conread position: | 43-609 |
| Cow position: | chr19:439913-439320 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 380 |
| Conread position: | 45-352 |
| Cow position: | chr19:536626-536929 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 128, 18 |
| Conread position: | 45-568 |
| Cow position: | chr19:261175-261728 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 100 |
| Conread position: | 45-628 |
| Cow position: | chr19:203698-204317 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 382 |
| Conread position: | 45-632 |
| Cow position: | chr19:171946-172572 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 375 |
| Conread position: | 45-632 |
| Cow position: | chr19:10672571-10671945 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 375 |
| Conread position: | 46-569 |
| Cow position: | chr19:7450261-7449739 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 358 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 41, 155 |
| Conread position: | 46-627 |
| Cow position: | chr19:33941348-33941966 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 374 |
| Conread position: | 46-632 |
| Cow position: | chr19:28581905-28581299 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 55 |
| Conread position: | 46-686 |
| Cow position: | chr19:4385221-4385882 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 248 |
| Conread position: | 47-408 |
| Cow position: | chr19:32193321-32193701 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 54, 46 |
| Conread position: | 47-613 |
| Cow position: | chr19:39546374-39546952 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 11 |
| Conread position: | 47-632 |
| Cow position: | chr19:32212323-32211712 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 148 |
| Conread position: | 51-310 |
| Cow position: | chr19:35376296-35376573 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 212 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 31, 262 |
| Conread position: | 52-455 |
| Cow position: | chr19:548138-548535 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 274 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 46, 83 |
| Conread position: | 73-390 |
| Cow position: | chr19:561732-561412 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 43 |
| Conread position: | 75-569 |
| Cow position: | chr19:32244453-32244970 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 18 |
| Conread position: | 76-703 |
| Cow position: | chr19:35979043-35979682 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 388 |
| Conread position: | 90-722 |
| Cow position: | chr19:378084-377461 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 205 |
| Conread position: | 93-718 |
| Cow position: | chr19:32223638-32223000 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 86 |
| Conread position: | 95-632 |
| Cow position: | chr19:170947-170386 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 427 |
| Conread position: | 95-681 |
| Cow position: | chr19:893809-893205 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 13 |
| Conread position: | 97-569 |
| Cow position: | chr19:40887853-40887370 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 100 |
| Conread position: | 105-616 |
| Cow position: | chr19:416456-417004 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 432 |
| Conread position: | 105-619 |
| Cow position: | chr19:30372086-30372594 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 357 |
| Conread position: | 125-430 |
| Cow position: | chr19:27052940-27052623 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 55, 79 |
| Conread position: | 139-498 |
| Cow position: | chr19:543790-543410 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 274 |
| Conread position: | 148-701 |
| Cow position: | chr19:42248661-42249236 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 173 |
| Conread position: | 179-627 |
| Cow position: | chr19:33873308-33873782 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 14 |
| Conread position: | 195-570 |
| Cow position: | chr19:350387-350004 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 226 |
| Conread position: | 201-702 |
| Cow position: | chr19:6553515-6554025 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 193 |
| Conread position: | 232-454 |
| Cow position: | chr19:18728791-18729020 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 69 |
| Conread position: | 248-504 |
| Cow position: | chr19:32237730-32237460 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 37, 126 |
| Conread position: | 306-613 |
| Cow position: | chr19:20104737-20105054 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 50, 16 |
| Conread position: | 311-632 |
| Cow position: | chr19:52151804-52151469 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 240 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 45, 7 |
| Conread position: | 312-722 |
| Cow position: | chr19:35376813-35377230 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 84 |
| Conread position: | 325-632 |
| Cow position: | chr19:2274338-2274018 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 227 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 12, 70 |
| Conread position: | 345-698 |
| Cow position: | chr19:352932-352562 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 255 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 71, 40 |
| Conread position: | 355-666 |
| Cow position: | chr19:687136-687458 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 58, 36 |
| Conread position: | 417-731 |
| Cow position: | chr19:42648979-42648655 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 95 |
| Conread position: | 441-630 |
| Cow position: | chr19:28376641-28376845 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 25, 70 |
| Conread position: | 503-722 |
| Cow position: | chr19:42906-43137 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 65, 7 |
| Conread position: | 509-703 |
| Cow position: | chr19:27052622-27052417 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 60, 93 |
| Conread position: | 570-722 |
| Cow position: | chr19:137058-136907 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 94, 0 |
Show alignments to all cow chromosomes.