Cow genome map
| Conread name: | Ova1-OVRM10196B05 |
| Conread position: | 1-722 |
| Cow position: | chr20:18315935-18315204 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 195 |
| Conread position: | 5-567 |
| Cow position: | chr20:20755781-20755208 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 375 |
| Conread position: | 7-429 |
| Cow position: | chr20:35973750-35973307 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 65 |
| Conread position: | 7-654 |
| Cow position: | chr20:5483844-5484534 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 170 |
| Conread position: | 7-711 |
| Cow position: | chr20:8313780-8313047 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 193 |
| Conread position: | 8-389 |
| Cow position: | chr20:28593402-28593799 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 147 |
| Conread position: | 8-424 |
| Cow position: | chr20:4799993-4799554 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 56 |
| Conread position: | 9-613 |
| Cow position: | chr20:3270375-3271002 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 77 |
| Conread position: | 9-613 |
| Cow position: | chr20:13762558-13763202 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 189 |
| Conread position: | 9-632 |
| Cow position: | chr20:15064417-15065084 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 101 |
| Conread position: | 9-706 |
| Cow position: | chr20:20905529-20904819 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 136 |
| Conread position: | 10-435 |
| Cow position: | chr20:22718026-22717586 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 75 |
| Conread position: | 15-455 |
| Cow position: | chr20:21393231-21393692 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 191 |
| Conread position: | 20-710 |
| Cow position: | chr20:13435241-13434564 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 68 |
| Conread position: | 28-610 |
| Cow position: | chr20:13665505-13664921 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 21 |
| Conread position: | 29-684 |
| Cow position: | chr20:9954281-9953617 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 76 |
| Conread position: | 43-613 |
| Cow position: | chr20:19437656-19438238 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 7 |
| Conread position: | 45-627 |
| Cow position: | chr20:5534634-5535250 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 157 |
| Conread position: | 45-627 |
| Cow position: | chr20:15098175-15097564 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 138 |
| Conread position: | 45-627 |
| Cow position: | chr20:23469968-23469353 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 376 |
| Conread position: | 45-627 |
| Cow position: | chr20:25851298-25850678 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 212 |
| Conread position: | 45-627 |
| Cow position: | chr20:28565908-28565283 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 379 |
| Conread position: | 45-635 |
| Cow position: | chr20:12439069-12438439 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 375 |
| Conread position: | 45-665 |
| Cow position: | chr20:21914019-21914672 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 24 |
| Conread position: | 45-723 |
| Cow position: | chr20:31379178-31378477 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 57 |
| Conread position: | 46-330 |
| Cow position: | chr20:24516564-24516859 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 35, 27 |
| Conread position: | 46-425 |
| Cow position: | chr20:10102852-10102461 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 148 |
| Conread position: | 46-627 |
| Cow position: | chr20:23798576-23799198 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 373 |
| Conread position: | 46-638 |
| Cow position: | chr20:28160474-28161094 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 225 |
| Conread position: | 46-648 |
| Cow position: | chr20:27868890-27869530 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 386 |
| Conread position: | 47-610 |
| Cow position: | chr20:822452-823062 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 62 |
| Conread position: | 47-653 |
| Cow position: | chr20:7116776-7116129 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 374 |
| Conread position: | 50-629 |
| Cow position: | chr20:24614247-24614850 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 148 |
| Conread position: | 70-344 |
| Cow position: | chr20:19192403-19192121 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 75-638 |
| Cow position: | chr20:5560985-5560391 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 18 |
| Conread position: | 90-626 |
| Cow position: | chr20:28476088-28476603 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 358 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 194, 18 |
| Conread position: | 90-627 |
| Cow position: | chr20:30684084-30684633 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 196 |
| Conread position: | 95-353 |
| Cow position: | chr20:13758017-13758272 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 129, 75 |
| Conread position: | 95-702 |
| Cow position: | chr20:22206293-22206925 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 142 |
| Conread position: | 105-432 |
| Cow position: | chr20:29572423-29572088 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 91 |
| Conread position: | 105-614 |
| Cow position: | chr20:3252373-3251836 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 306 |
| Conread position: | 110-518 |
| Cow position: | chr20:11679345-11678918 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 293 |
| Conread position: | 136-627 |
| Cow position: | chr20:35119365-35119882 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 276 |
| Conread position: | 142-355 |
| Cow position: | chr20:24390170-24390390 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 38, 185 |
| Conread position: | 165-648 |
| Cow position: | chr20:29948338-29948832 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 148 |
| Conread position: | 179-613 |
| Cow position: | chr20:15291856-15292308 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 14 |
| Conread position: | 179-686 |
| Cow position: | chr20:8004385-8003856 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 12 |
| Conread position: | 216-668 |
| Cow position: | chr20:15947519-15947029 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 341 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 20, 325 |
| Conread position: | 233-631 |
| Cow position: | chr20:25960995-25961420 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 172 |
| Conread position: | 241-667 |
| Cow position: | chr20:3032964-3033414 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 73 |
| Conread position: | 248-669 |
| Cow position: | chr20:13680150-13679703 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 160 |
| Conread position: | 299-633 |
| Cow position: | chr20:3684523-3684168 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 105 |
| Conread position: | 315-732 |
| Cow position: | chr20:8993654-8993216 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 290 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 153, 16 |
Show alignments to all cow chromosomes.