Cow genome map


           Conread name:
           Ova1-OVRM10196B05
        

               Conread position:
               1-699
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 11
               

               Conread position:
               5-613
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 188
               

               Conread position:
               7-454
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 98
               

               Conread position:
               7-482
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 185
               

               Conread position:
               7-501
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 98
               

               Conread position:
               7-569
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 338
               

               Conread position:
               7-570
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 57
               

               Conread position:
               7-613
               

               Cow position:
               
               

               Alignm length:
               650
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 257
               

               Conread position:
               7-613
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 50
               

               Conread position:
               7-627
               

               Cow position:
               
               

               Alignm length:
               664
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 159
               

               Conread position:
               7-645
               

               Cow position:
               
               

               Alignm length:
               664
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 123
               

               Conread position:
               7-687
               

               Cow position:
               
               

               Alignm length:
               733
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 339
               

               Conread position:
               8-667
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 184
               

               Conread position:
               9-627
               

               Cow position:
               
               

               Alignm length:
               663
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 219
               

               Conread position:
               9-627
               

               Cow position:
               
               

               Alignm length:
               661
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 157
               

               Conread position:
               13-407
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 310
               

               Conread position:
               13-613
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 22
               

               Conread position:
               13-613
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 50
               

               Conread position:
               15-651
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 406
               

               Conread position:
               29-697
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               442
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               23, 254
               

               Conread position:
               32-540
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 122
               

               Conread position:
               32-698
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 38
               

               Conread position:
               42-678
               

               Cow position:
               
               

               Alignm length:
               686
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 6
               

               Conread position:
               44-613
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 158
               

               Conread position:
               45-471
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 384
               

               Conread position:
               45-613
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 366
               

               Conread position:
               45-627
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 373
               

               Conread position:
               45-627
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 71
               

               Conread position:
               45-627
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 375
               

               Conread position:
               45-638
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 59
               

               Conread position:
               45-650
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 372
               

               Conread position:
               45-686
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 143
               

               Conread position:
               45-722
               

               Cow position:
               
               

               Alignm length:
               711
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 56
               

               Conread position:
               46-303
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               46-351
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               46-689
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 29
               

               Conread position:
               47-408
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               272
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               45, 365
               

               Conread position:
               47-444
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 140
               

               Conread position:
               47-449
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               47-569
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 375
               

               Conread position:
               47-610
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 71
               

               Conread position:
               47-613
               

               Cow position:
               
               

               Alignm length:
               633
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 245
               

               Conread position:
               47-613
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 88
               

               Conread position:
               47-613
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 54
               

               Conread position:
               47-613
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 350
               

               Conread position:
               47-613
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 142
               

               Conread position:
               47-627
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 22
               

               Conread position:
               52-569
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 151
               

               Conread position:
               56-729
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 127
               

               Conread position:
               75-336
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               26, 18
               

               Conread position:
               75-610
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 18
               

               Conread position:
               75-613
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 18
               

               Conread position:
               90-613
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 311
               

               Conread position:
               90-722
               

               Cow position:
               
               

               Alignm length:
               672
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 254
               

               Conread position:
               95-524
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               284
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               19, 86
               

               Conread position:
               95-530
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 302
               

               Conread position:
               125-613
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 19
               

               Conread position:
               156-697
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               380
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               78, 30
               

               Conread position:
               184-645
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 7
               

               Conread position:
               210-689
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 279
               

               Conread position:
               215-632
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 185
               

               Conread position:
               215-708
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 185
               

               Conread position:
               276-612
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 128
               

               Conread position:
               278-551
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               69, 111
               

               Conread position:
               303-667
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 219
               

               Conread position:
               319-611
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               33, 66
               

               Conread position:
               321-725
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               278
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               95, 31
               

               Conread position:
               330-627
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               126, 11
               

               Conread position:
               394-651
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               19, 119
               

               Conread position:
               408-627
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               54, 104
               

               Conread position:
               412-613
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               9, 46
               

               Conread position:
               446-722
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               16, 66
               

               Conread position:
               458-708
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               102, 24
               

               Conread position:
               461-722
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               211
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               110, 42
               
Show alignments to all cow chromosomes.