Cow genome map

Conread name: Ova1-OVRM10196B05

Conread position: 4-613
Cow position: chr22:46852936-46853586 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 183

Conread position: 5-480
Cow position: chr22:1293896-1293395 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 146

Conread position: 7-238
Cow position: chr22:36534368-36534121 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 47, 0

Conread position: 7-365
Cow position: chr22:309320-309688 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 60

Conread position: 7-420
Cow position: chr22:1285335-1284894 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 296
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 45, 412

Conread position: 7-613
Cow position: chr22:118219-117598 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 357

Conread position: 7-613
Cow position: chr22:36736371-36737003 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 57

Conread position: 7-614
Cow position: chr22:37131247-37131878 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 172

Conread position: 7-668
Cow position: chr22:5672335-5673037 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 181

Conread position: 7-694
Cow position: chr22:41420088-41419369 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 195

Conread position: 7-704
Cow position: chr22:1321220-1321923 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 70

Conread position: 7-722
Cow position: chr22:6504057-6503322 (view UCSC Genome Browser custom track)
Alignm length: 747
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 95

Conread position: 8-612
Cow position: chr22:39882575-39881933 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 154

Conread position: 8-632
Cow position: chr22:15850943-15851584 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 147

Conread position: 9-280
Cow position: chr22:46585713-46585426 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 193
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 11-698
Cow position: chr22:871235-870568 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 94

Conread position: 14-710
Cow position: chr22:7277126-7277860 (view UCSC Genome Browser custom track)
Alignm length: 741
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 332

Conread position: 15-556
Cow position: chr22:24949434-24950006 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 406

Conread position: 15-613
Cow position: chr22:3278745-3278112 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 310

Conread position: 15-613
Cow position: chr22:5233692-5233061 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 120

Conread position: 15-613
Cow position: chr22:44370009-44369382 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 187

Conread position: 41-651
Cow position: chr22:35672720-35672072 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 7

Conread position: 45-627
Cow position: chr22:34167970-34168590 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 375

Conread position: 45-627
Cow position: chr22:36861892-36861271 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 384

Conread position: 45-627
Cow position: chr22:39469879-39469264 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 175

Conread position: 45-631
Cow position: chr22:17329101-17328476 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 384

Conread position: 45-644
Cow position: chr22:31312983-31313615 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 158

Conread position: 45-653
Cow position: chr22:44933618-44934265 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 374

Conread position: 45-686
Cow position: chr22:18816743-18816070 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 107

Conread position: 46-353
Cow position: chr22:9657964-9658284 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 46-626
Cow position: chr22:21588972-21589582 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 239

Conread position: 46-627
Cow position: chr22:561060-560446 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 239

Conread position: 46-627
Cow position: chr22:19144058-19143440 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 104

Conread position: 46-627
Cow position: chr22:42990811-42991431 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 374

Conread position: 47-283
Cow position: chr22:44456954-44457204 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 51, 193

Conread position: 47-319
Cow position: chr22:18476120-18475838 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 45, 153

Conread position: 47-421
Cow position: chr22:6984895-6985295 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 364

Conread position: 47-569
Cow position: chr22:32485687-32485164 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 146

Conread position: 47-611
Cow position: chr22:5307758-5308345 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 198

Conread position: 47-611
Cow position: chr22:10546291-10546887 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 152

Conread position: 47-613
Cow position: chr22:1319036-1319641 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 492

Conread position: 47-613
Cow position: chr22:27310136-27309529 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 376

Conread position: 47-615
Cow position: chr22:693280-693872 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 54

Conread position: 47-644
Cow position: chr22:31335392-31334762 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 372

Conread position: 47-653
Cow position: chr22:158274-157621 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 423

Conread position: 47-669
Cow position: chr22:1878434-1879092 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 368

Conread position: 47-722
Cow position: chr22:3307078-3306377 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 81

Conread position: 50-653
Cow position: chr22:44353304-44352680 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 238

Conread position: 50-693
Cow position: chr22:327505-326843 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 121

Conread position: 50-710
Cow position: chr22:8136548-8135865 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 284

Conread position: 59-722
Cow position: chr22:11030619-11031316 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 49

Conread position: 75-354
Cow position: chr22:4065317-4065604 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 170
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 26, 18

Conread position: 75-651
Cow position: chr22:16200171-16200757 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 67

Conread position: 84-616
Cow position: chr22:5933292-5932753 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 9

Conread position: 90-487
Cow position: chr22:37265146-37265562 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 317

Conread position: 90-654
Cow position: chr22:1270806-1270247 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 18

Conread position: 90-697
Cow position: chr22:15957003-15956380 (view UCSC Genome Browser custom track)
Alignm length: 639
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 52

Conread position: 93-569
Cow position: chr22:46636002-46635525 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 31

Conread position: 94-632
Cow position: chr22:32348272-32347724 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 79

Conread position: 95-374
Cow position: chr22:10077051-10076772 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 260, 95

Conread position: 95-564
Cow position: chr22:37073471-37073029 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 88

Conread position: 95-616
Cow position: chr22:44489587-44490134 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 63

Conread position: 95-719
Cow position: chr22:34598374-34599011 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 47

Conread position: 95-726
Cow position: chr22:36267073-36267691 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 83

Conread position: 125-613
Cow position: chr22:27283776-27284275 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 9

Conread position: 125-649
Cow position: chr22:44475005-44475517 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 55

Conread position: 126-654
Cow position: chr22:11782804-11782251 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 61

Conread position: 128-613
Cow position: chr22:36183488-36184000 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 28

Conread position: 132-523
Cow position: chr22:27386698-27386289 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 280

Conread position: 142-569
Cow position: chr22:36274549-36274998 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 162

Conread position: 142-722
Cow position: chr22:44609357-44609941 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 14

Conread position: 160-613
Cow position: chr22:536862-537345 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 252

Conread position: 170-722
Cow position: chr22:13917278-13917859 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 20

Conread position: 179-477
Cow position: chr22:12732060-12731753 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 225
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 57, 12

Conread position: 181-648
Cow position: chr22:15314162-15313672 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 12

Conread position: 191-628
Cow position: chr22:525881-525434 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 75

Conread position: 203-528
Cow position: chr22:34606870-34607204 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 233
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 49, 145

Conread position: 226-613
Cow position: chr22:36533907-36533497 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 294

Conread position: 232-613
Cow position: chr22:46547827-46547420 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 176

Conread position: 248-651
Cow position: chr22:20240988-20240558 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 157

Conread position: 250-651
Cow position: chr22:46581724-46581304 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 296
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 56, 30

Conread position: 273-687
Cow position: chr22:1048293-1048721 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 124

Conread position: 276-569
Cow position: chr22:8874879-8875176 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 205
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 61, 123

Conread position: 280-532
Cow position: chr22:45975866-45976121 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 126

Conread position: 280-613
Cow position: chr22:42771364-42771699 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 241
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 75, 106

Conread position: 287-613
Cow position: chr22:10909942-10909589 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 255
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 51, 169

Conread position: 306-651
Cow position: chr22:6020589-6020946 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 16

Conread position: 343-704
Cow position: chr22:309740-310110 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 56

Conread position: 350-600
Cow position: chr22:44396420-44396681 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 198
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 60, 44

Conread position: 353-516
Cow position: chr22:1860839-1860671 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 25

Conread position: 363-569
Cow position: chr22:35943224-35943021 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 24, 31

Conread position: 400-632
Cow position: chr22:18027300-18027543 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 71, 10

Conread position: 415-721
Cow position: chr22:1283616-1283303 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 101

Conread position: 433-720
Cow position: chr22:23853383-23853683 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 59

Conread position: 437-613
Cow position: chr22:38938027-38937839 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 74

Show alignments to all cow chromosomes.