Cow genome map
| Conread name: | Ova1-OVRM10196B05 |
| Conread position: | 1-569 |
| Cow position: | chr23:1025459-1024875 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 134 |
| Conread position: | 7-288 |
| Cow position: | chr23:1330689-1330392 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 219 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 42, 193 |
| Conread position: | 7-371 |
| Cow position: | chr23:31652242-31651889 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 263 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 97, 49 |
| Conread position: | 7-455 |
| Cow position: | chr23:16481754-16481299 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 308 |
| Conread position: | 7-567 |
| Cow position: | chr23:22147662-22147063 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 425 |
| Conread position: | 7-568 |
| Cow position: | chr23:3013228-3013834 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 246 |
| Conread position: | 7-592 |
| Cow position: | chr23:5875175-5874559 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 195 |
| Conread position: | 7-611 |
| Cow position: | chr23:989044-988406 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 413 |
| Conread position: | 7-611 |
| Cow position: | chr23:5779489-5778845 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 532 |
| Conread position: | 7-616 |
| Cow position: | chr23:16617240-16616599 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 82 |
| Conread position: | 7-638 |
| Cow position: | chr23:7273258-7273902 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 71 |
| Conread position: | 8-391 |
| Cow position: | chr23:22876028-22875631 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 18 |
| Conread position: | 9-269 |
| Cow position: | chr23:1141168-1141433 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 39, 66 |
| Conread position: | 9-627 |
| Cow position: | chr23:2795963-2795309 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 280 |
| Conread position: | 9-627 |
| Cow position: | chr23:19489139-19489801 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 195 |
| Conread position: | 9-627 |
| Cow position: | chr23:30636703-30636042 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 468 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 415 |
| Conread position: | 9-667 |
| Cow position: | chr23:2574164-2574832 (view UCSC Genome Browser custom track) |
| Alignm length: | 694 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 315 |
| Conread position: | 15-627 |
| Cow position: | chr23:4434076-4434715 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 397 |
| Conread position: | 15-651 |
| Cow position: | chr23:19950980-19950302 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 178 |
| Conread position: | 33-627 |
| Cow position: | chr23:3882068-3881446 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 161 |
| Conread position: | 41-304 |
| Cow position: | chr23:2715985-2716260 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 5, 269 |
| Conread position: | 41-323 |
| Cow position: | chr23:2765734-2765449 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 56 |
| Conread position: | 42-627 |
| Cow position: | chr23:967712-967091 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 375 |
| Conread position: | 45-613 |
| Cow position: | chr23:15525252-15525854 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 155 |
| Conread position: | 45-631 |
| Cow position: | chr23:27399142-27399766 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 235 |
| Conread position: | 45-632 |
| Cow position: | chr23:4509745-4510342 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 156 |
| Conread position: | 45-632 |
| Cow position: | chr23:28913051-28913660 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 311 |
| Conread position: | 46-556 |
| Cow position: | chr23:4815714-4816251 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 101 |
| Conread position: | 46-627 |
| Cow position: | chr23:4640985-4640365 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 383 |
| Conread position: | 46-632 |
| Cow position: | chr23:36031730-36031110 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 157 |
| Conread position: | 46-697 |
| Cow position: | chr23:15220253-15219563 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 386 |
| Conread position: | 47-280 |
| Cow position: | chr23:31595536-31595292 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 190 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 42, 69 |
| Conread position: | 47-353 |
| Cow position: | chr23:8980848-8980530 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 157 |
| Conread position: | 47-630 |
| Cow position: | chr23:4276599-4277217 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 151 |
| Conread position: | 47-651 |
| Cow position: | chr23:4359477-4360114 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 363 |
| Conread position: | 47-666 |
| Cow position: | chr23:28216932-28217588 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 355 |
| Conread position: | 50-293 |
| Cow position: | chr23:2725506-2725758 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 192 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 48, 126 |
| Conread position: | 75-610 |
| Cow position: | chr23:31446491-31447056 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 18 |
| Conread position: | 89-723 |
| Cow position: | chr23:19332706-19332056 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 430 |
| Conread position: | 91-612 |
| Cow position: | chr23:15176768-15177314 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 10 |
| Conread position: | 93-702 |
| Cow position: | chr23:4751709-4752322 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 35 |
| Conread position: | 95-652 |
| Cow position: | chr23:2313541-2312955 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 308 |
| Conread position: | 95-667 |
| Cow position: | chr23:20301908-20302510 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 305 |
| Conread position: | 96-627 |
| Cow position: | chr23:2027418-2026860 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 98 |
| Conread position: | 99-632 |
| Cow position: | chr23:11778186-11778753 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 223 |
| Conread position: | 111-347 |
| Cow position: | chr23:7750105-7750347 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 115-627 |
| Cow position: | chr23:4888397-4888932 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 288 |
| Conread position: | 128-627 |
| Cow position: | chr23:2757310-2757853 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 37 |
| Conread position: | 142-569 |
| Cow position: | chr23:2524452-2524008 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 273 |
| Conread position: | 175-631 |
| Cow position: | chr23:20156453-20155955 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 16 |
| Conread position: | 179-666 |
| Cow position: | chr23:14974777-14974273 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 12 |
| Conread position: | 181-627 |
| Cow position: | chr23:14965961-14965493 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 269 |
| Conread position: | 199-722 |
| Cow position: | chr23:38578095-38578631 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 54 |
| Conread position: | 204-569 |
| Cow position: | chr23:6216383-6216759 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 218 |
| Conread position: | 223-632 |
| Cow position: | chr23:25684231-25683799 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 119 |
| Conread position: | 251-648 |
| Cow position: | chr23:2716259-2716668 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 281 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 28, 50 |
| Conread position: | 257-668 |
| Cow position: | chr23:31591946-31591503 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 63 |
| Conread position: | 262-727 |
| Cow position: | chr23:29474686-29474195 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 67 |
| Conread position: | 280-722 |
| Cow position: | chr23:1327571-1327118 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 75 |
| Conread position: | 299-569 |
| Cow position: | chr23:10903440-10903724 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 28, 101 |
| Conread position: | 331-609 |
| Cow position: | chr23:31595288-31594996 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 21, 48 |
| Conread position: | 359-506 |
| Cow position: | chr23:31651575-31651433 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 402-710 |
| Cow position: | chr23:16615975-16615655 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 111 |
| Conread position: | 431-613 |
| Cow position: | chr23:2765403-2765209 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 28, 80 |
| Conread position: | 431-723 |
| Cow position: | chr23:22875623-22875329 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 60 |
| Conread position: | 499-732 |
| Cow position: | chr23:31650790-31650549 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 72, 9 |
| Conread position: | 568-722 |
| Cow position: | chr23:1402685-1402528 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 50, 0 |
Show alignments to all cow chromosomes.