Cow genome map


           Conread name:
           Ova1-OVRM10196B05
        

               Conread position:
               1-569
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 134
               

               Conread position:
               7-288
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               219
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               42, 193
               

               Conread position:
               7-371
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               263
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               97, 49
               

               Conread position:
               7-455
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 308
               

               Conread position:
               7-567
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 425
               

               Conread position:
               7-568
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 246
               

               Conread position:
               7-592
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 195
               

               Conread position:
               7-611
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 413
               

               Conread position:
               7-611
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               464
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 532
               

               Conread position:
               7-616
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 82
               

               Conread position:
               7-638
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 71
               

               Conread position:
               8-391
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 18
               

               Conread position:
               9-269
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               39, 66
               

               Conread position:
               9-627
               

               Cow position:
               
               

               Alignm length:
               660
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 280
               

               Conread position:
               9-627
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 195
               

               Conread position:
               9-627
               

               Cow position:
               
               

               Alignm length:
               665
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 415
               

               Conread position:
               9-667
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 315
               

               Conread position:
               15-627
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 397
               

               Conread position:
               15-651
               

               Cow position:
               
               

               Alignm length:
               687
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 178
               

               Conread position:
               33-627
               

               Cow position:
               
               

               Alignm length:
               630
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 161
               

               Conread position:
               41-304
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               5, 269
               

               Conread position:
               41-323
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 56
               

               Conread position:
               42-627
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 375
               

               Conread position:
               45-613
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 155
               

               Conread position:
               45-631
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               455
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 235
               

               Conread position:
               45-632
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 156
               

               Conread position:
               45-632
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 311
               

               Conread position:
               46-556
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 101
               

               Conread position:
               46-627
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 383
               

               Conread position:
               46-632
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 157
               

               Conread position:
               46-697
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 386
               

               Conread position:
               47-280
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               190
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               42, 69
               

               Conread position:
               47-353
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 157
               

               Conread position:
               47-630
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 151
               

               Conread position:
               47-651
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 363
               

               Conread position:
               47-666
               

               Cow position:
               
               

               Alignm length:
               662
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 355
               

               Conread position:
               50-293
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               48, 126
               

               Conread position:
               75-610
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 18
               

               Conread position:
               89-723
               

               Cow position:
               
               

               Alignm length:
               655
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 430
               

               Conread position:
               91-612
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 10
               

               Conread position:
               93-702
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 35
               

               Conread position:
               95-652
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 308
               

               Conread position:
               95-667
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 305
               

               Conread position:
               96-627
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 98
               

               Conread position:
               99-632
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 223
               

               Conread position:
               111-347
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               115-627
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 288
               

               Conread position:
               128-627
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 37
               

               Conread position:
               142-569
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 273
               

               Conread position:
               175-631
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 16
               

               Conread position:
               179-666
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 12
               

               Conread position:
               181-627
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 269
               

               Conread position:
               199-722
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 54
               

               Conread position:
               204-569
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 218
               

               Conread position:
               223-632
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 119
               

               Conread position:
               251-648
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               281
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               28, 50
               

               Conread position:
               257-668
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 63
               

               Conread position:
               262-727
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 67
               

               Conread position:
               280-722
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 75
               

               Conread position:
               299-569
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               28, 101
               

               Conread position:
               331-609
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               21, 48
               

               Conread position:
               359-506
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               402-710
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 111
               

               Conread position:
               431-613
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               28, 80
               

               Conread position:
               431-723
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 60
               

               Conread position:
               499-732
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               72, 9
               

               Conread position:
               568-722
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               50, 0
               
Show alignments to all cow chromosomes.