Cow genome map
| Conread name: | Ova1-OVRM10196B05 |
| Conread position: | 5-717 |
| Cow position: | chr24:36560391-36559651 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 121 |
| Conread position: | 7-234 |
| Cow position: | chr24:35990969-35990737 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 89, 177 |
| Conread position: | 7-387 |
| Cow position: | chr24:12289036-12288649 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 191 |
| Conread position: | 7-452 |
| Cow position: | chr24:17187228-17187698 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 279 |
| Conread position: | 7-488 |
| Cow position: | chr24:14391039-14390540 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 196 |
| Conread position: | 7-602 |
| Cow position: | chr24:15392614-15392021 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 188 |
| Conread position: | 7-614 |
| Cow position: | chr24:6335380-6336013 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 444 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 137 |
| Conread position: | 7-615 |
| Cow position: | chr24:12236744-12237386 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 191 |
| Conread position: | 7-725 |
| Cow position: | chr24:1447262-1448000 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 109 |
| Conread position: | 7-725 |
| Cow position: | chr24:35841920-35841178 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 42 |
| Conread position: | 7-732 |
| Cow position: | chr24:36707543-36708290 (view UCSC Genome Browser custom track) |
| Alignm length: | 764 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 42 |
| Conread position: | 8-508 |
| Cow position: | chr24:38635431-38635969 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 139 |
| Conread position: | 8-607 |
| Cow position: | chr24:32331029-32331639 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 161 |
| Conread position: | 8-722 |
| Cow position: | chr24:12798067-12797328 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 58 |
| Conread position: | 9-508 |
| Cow position: | chr24:39678129-39678624 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 63 |
| Conread position: | 9-569 |
| Cow position: | chr24:12114346-12113772 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 195 |
| Conread position: | 9-613 |
| Cow position: | chr24:6433922-6434570 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 419 |
| Conread position: | 9-613 |
| Cow position: | chr24:33933052-33933696 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 408 |
| Conread position: | 13-228 |
| Cow position: | chr24:37216415-37216651 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 15-452 |
| Cow position: | chr24:6645108-6645570 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 191 |
| Conread position: | 15-651 |
| Cow position: | chr24:33739652-33738970 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 138 |
| Conread position: | 33-569 |
| Cow position: | chr24:14873631-14873075 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 244 |
| Conread position: | 34-278 |
| Cow position: | chr24:8153102-8152865 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 12, 23 |
| Conread position: | 40-630 |
| Cow position: | chr24:35838913-35838272 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 513 |
| Conread position: | 41-607 |
| Cow position: | chr24:13187916-13188497 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 7 |
| Conread position: | 43-627 |
| Cow position: | chr24:148869-148274 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 20 |
| Conread position: | 45-613 |
| Cow position: | chr24:12161603-12162185 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 130 |
| Conread position: | 45-627 |
| Cow position: | chr24:12085924-12086543 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 178 |
| Conread position: | 45-627 |
| Cow position: | chr24:19833108-19833730 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 157 |
| Conread position: | 45-633 |
| Cow position: | chr24:4415807-4415178 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 199 |
| Conread position: | 46-722 |
| Cow position: | chr24:16649568-16648880 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 290 |
| Conread position: | 47-336 |
| Cow position: | chr24:13021398-13021699 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 45, 153 |
| Conread position: | 47-454 |
| Cow position: | chr24:7060833-7061259 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 252 |
| Conread position: | 47-545 |
| Cow position: | chr24:12131755-12131235 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 363 |
| Conread position: | 47-610 |
| Cow position: | chr24:12485591-12484990 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 364 |
| Conread position: | 47-613 |
| Cow position: | chr24:14384883-14384285 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 367 |
| Conread position: | 47-613 |
| Cow position: | chr24:22792903-22793502 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 155 |
| Conread position: | 47-632 |
| Cow position: | chr24:6025370-6024748 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 375 |
| Conread position: | 47-632 |
| Cow position: | chr24:6083743-6084367 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 370 |
| Conread position: | 47-651 |
| Cow position: | chr24:9189004-9188362 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 363 |
| Conread position: | 47-668 |
| Cow position: | chr24:6145086-6145755 (view UCSC Genome Browser custom track) |
| Alignm length: | 672 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 474 |
| Conread position: | 47-710 |
| Cow position: | chr24:12567981-12568658 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 29 |
| Conread position: | 50-295 |
| Cow position: | chr24:12207871-12208122 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 48, 99 |
| Conread position: | 75-454 |
| Cow position: | chr24:2635882-2636276 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 18 |
| Conread position: | 75-601 |
| Cow position: | chr24:44017308-44017864 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 18 |
| Conread position: | 75-613 |
| Cow position: | chr24:8029913-8030481 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 13 |
| Conread position: | 90-686 |
| Cow position: | chr24:6351973-6352584 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 210 |
| Conread position: | 91-589 |
| Cow position: | chr24:12939987-12940488 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 327 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 89, 12 |
| Conread position: | 93-402 |
| Cow position: | chr24:13531751-13531430 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 239 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 79, 19 |
| Conread position: | 126-651 |
| Cow position: | chr24:16084847-16084289 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 283 |
| Conread position: | 141-723 |
| Cow position: | chr24:17303768-17303177 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 121 |
| Conread position: | 147-673 |
| Cow position: | chr24:14584929-14585467 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 12 |
| Conread position: | 159-569 |
| Cow position: | chr24:22951982-22952411 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 253 |
| Conread position: | 167-665 |
| Cow position: | chr24:9092419-9091899 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 235 |
| Conread position: | 180-610 |
| Cow position: | chr24:40548747-40549201 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 225 |
| Conread position: | 226-424 |
| Cow position: | chr24:35987428-35987228 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 10, 67 |
| Conread position: | 232-616 |
| Cow position: | chr24:37216927-37217332 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 177 |
| Conread position: | 244-437 |
| Cow position: | chr24:14333036-14333241 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 163 |
| Conread position: | 252-703 |
| Cow position: | chr24:6660665-6660183 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 328 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 27, 147 |
| Conread position: | 311-569 |
| Cow position: | chr24:13524126-13524379 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 44, 61 |
| Conread position: | 325-627 |
| Cow position: | chr24:17696944-17696633 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 231 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 12, 70 |
| Conread position: | 342-710 |
| Cow position: | chr24:7091550-7091170 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 54 |
| Conread position: | 345-644 |
| Cow position: | chr24:12335724-12335413 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 224 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 65, 46 |
| Conread position: | 350-627 |
| Cow position: | chr24:29187338-29187628 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 44 |
| Conread position: | 359-611 |
| Cow position: | chr24:1438119-1437860 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 55, 26 |
| Conread position: | 371-704 |
| Cow position: | chr24:12288316-12287973 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 42, 14 |
| Conread position: | 420-666 |
| Cow position: | chr24:6645827-6646084 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 19, 93 |
| Conread position: | 470-698 |
| Cow position: | chr24:16376701-16376934 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 7, 39 |
| Conread position: | 570-723 |
| Cow position: | chr24:13302700-13302544 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 571-700 |
| Cow position: | chr24:38636893-38637025 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 575-702 |
| Cow position: | chr24:12145645-12145515 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
Show alignments to all cow chromosomes.