Cow genome map


           Conread name:
           Ova1-OVRM10196B05
        

               Conread position:
               5-717
               

               Cow position:
               
               

               Alignm length:
               749
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 121
               

               Conread position:
               7-234
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               89, 177
               

               Conread position:
               7-387
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 191
               

               Conread position:
               7-452
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 279
               

               Conread position:
               7-488
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 196
               

               Conread position:
               7-602
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 188
               

               Conread position:
               7-614
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 137
               

               Conread position:
               7-615
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 191
               

               Conread position:
               7-725
               

               Cow position:
               
               

               Alignm length:
               751
               

               Alignm identity:
               536
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 109
               

               Conread position:
               7-725
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 42
               

               Conread position:
               7-732
               

               Cow position:
               
               

               Alignm length:
               764
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 42
               

               Conread position:
               8-508
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 139
               

               Conread position:
               8-607
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 161
               

               Conread position:
               8-722
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               539
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 58
               

               Conread position:
               9-508
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 63
               

               Conread position:
               9-569
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 195
               

               Conread position:
               9-613
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 419
               

               Conread position:
               9-613
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 408
               

               Conread position:
               13-228
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               15-452
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 191
               

               Conread position:
               15-651
               

               Cow position:
               
               

               Alignm length:
               691
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 138
               

               Conread position:
               33-569
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 244
               

               Conread position:
               34-278
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               12, 23
               

               Conread position:
               40-630
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 513
               

               Conread position:
               41-607
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 7
               

               Conread position:
               43-627
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 20
               

               Conread position:
               45-613
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 130
               

               Conread position:
               45-627
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 178
               

               Conread position:
               45-627
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 157
               

               Conread position:
               45-633
               

               Cow position:
               
               

               Alignm length:
               634
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 199
               

               Conread position:
               46-722
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 290
               

               Conread position:
               47-336
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               45, 153
               

               Conread position:
               47-454
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 252
               

               Conread position:
               47-545
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 363
               

               Conread position:
               47-610
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 364
               

               Conread position:
               47-613
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 367
               

               Conread position:
               47-613
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 155
               

               Conread position:
               47-632
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 375
               

               Conread position:
               47-632
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 370
               

               Conread position:
               47-651
               

               Cow position:
               
               

               Alignm length:
               645
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 363
               

               Conread position:
               47-668
               

               Cow position:
               
               

               Alignm length:
               672
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 474
               

               Conread position:
               47-710
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 29
               

               Conread position:
               50-295
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               48, 99
               

               Conread position:
               75-454
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 18
               

               Conread position:
               75-601
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 18
               

               Conread position:
               75-613
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 13
               

               Conread position:
               90-686
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 210
               

               Conread position:
               91-589
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               327
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               89, 12
               

               Conread position:
               93-402
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               239
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               79, 19
               

               Conread position:
               126-651
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 283
               

               Conread position:
               141-723
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 121
               

               Conread position:
               147-673
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 12
               

               Conread position:
               159-569
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 253
               

               Conread position:
               167-665
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 235
               

               Conread position:
               180-610
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 225
               

               Conread position:
               226-424
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               10, 67
               

               Conread position:
               232-616
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 177
               

               Conread position:
               244-437
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               35, 163
               

               Conread position:
               252-703
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               328
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               27, 147
               

               Conread position:
               311-569
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               44, 61
               

               Conread position:
               325-627
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               231
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               12, 70
               

               Conread position:
               342-710
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 54
               

               Conread position:
               345-644
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               224
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               65, 46
               

               Conread position:
               350-627
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 44
               

               Conread position:
               359-611
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 26
               

               Conread position:
               371-704
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               42, 14
               

               Conread position:
               420-666
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               19, 93
               

               Conread position:
               470-698
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               7, 39
               

               Conread position:
               570-723
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               571-700
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               575-702
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               42, 0
               
Show alignments to all cow chromosomes.