Cow genome map

Conread name: Ova1-OVRM10196B05

Conread position: 7-408
Cow position:
Alignm length: 426
Alignm identity: 290
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 38, 229

Conread position: 7-450
Cow position:
Alignm length: 469
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 228

Conread position: 7-569
Cow position:
Alignm length: 579
Alignm identity: 372
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 43, 28

Conread position: 7-569
Cow position:
Alignm length: 574
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 98

Conread position: 7-613
Cow position:
Alignm length: 645
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 111

Conread position: 7-613
Cow position:
Alignm length: 651
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 41

Conread position: 7-632
Cow position:
Alignm length: 671
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 133

Conread position: 7-632
Cow position:
Alignm length: 670
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 276

Conread position: 7-722
Cow position:
Alignm length: 761
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 38

Conread position: 7-722
Cow position:
Alignm length: 751
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 184

Conread position: 8-225
Cow position:
Alignm length: 234
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 171

Conread position: 8-400
Cow position:
Alignm length: 411
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 188

Conread position: 9-371
Cow position:
Alignm length: 391
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 9-627
Cow position:
Alignm length: 655
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 406

Conread position: 9-627
Cow position:
Alignm length: 657
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 183

Conread position: 9-632
Cow position:
Alignm length: 669
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 424

Conread position: 9-722
Cow position:
Alignm length: 747
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 178

Conread position: 11-613
Cow position:
Alignm length: 646
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 195

Conread position: 11-702
Cow position:
Alignm length: 746
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 28

Conread position: 15-303
Cow position:
Alignm length: 306
Alignm identity: 223
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 43, 64

Conread position: 15-613
Cow position:
Alignm length: 634
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 103

Conread position: 31-613
Cow position:
Alignm length: 617
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 10

Conread position: 35-491
Cow position:
Alignm length: 482
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 145

Conread position: 39-504
Cow position:
Alignm length: 483
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 112

Conread position: 44-613
Cow position:
Alignm length: 604
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 366

Conread position: 45-339
Cow position:
Alignm length: 308
Alignm identity: 220
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 53, 0

Conread position: 45-339
Cow position:
Alignm length: 309
Alignm identity: 222
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 53, 242

Conread position: 45-613
Cow position:
Alignm length: 594
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 56

Conread position: 45-627
Cow position:
Alignm length: 615
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 39

Conread position: 45-627
Cow position:
Alignm length: 625
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 375

Conread position: 45-627
Cow position:
Alignm length: 624
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 383

Conread position: 45-627
Cow position:
Alignm length: 625
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 384

Conread position: 45-627
Cow position:
Alignm length: 622
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 386

Conread position: 45-722
Cow position:
Alignm length: 709
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 326

Conread position: 46-323
Cow position:
Alignm length: 292
Alignm identity: 211
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 36, 266

Conread position: 46-604
Cow position:
Alignm length: 598
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 375

Conread position: 46-627
Cow position:
Alignm length: 622
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 184

Conread position: 46-627
Cow position:
Alignm length: 623
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 373

Conread position: 46-627
Cow position:
Alignm length: 626
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 157

Conread position: 46-627
Cow position:
Alignm length: 618
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 369

Conread position: 47-295
Cow position:
Alignm length: 257
Alignm identity: 184
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 51, 136

Conread position: 47-491
Cow position:
Alignm length: 472
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 362

Conread position: 47-569
Cow position:
Alignm length: 546
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 375

Conread position: 47-613
Cow position:
Alignm length: 608
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 485

Conread position: 47-613
Cow position:
Alignm length: 607
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 370

Conread position: 47-628
Cow position:
Alignm length: 623
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 372

Conread position: 47-632
Cow position:
Alignm length: 626
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 369

Conread position: 47-651
Cow position:
Alignm length: 642
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 54

Conread position: 63-613
Cow position:
Alignm length: 568
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 63

Conread position: 64-346
Cow position:
Alignm length: 285
Alignm identity: 214
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 172, 37

Conread position: 90-627
Cow position:
Alignm length: 575
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 313

Conread position: 95-624
Cow position:
Alignm length: 562
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 135

Conread position: 115-608
Cow position:
Alignm length: 524
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 174

Conread position: 125-454
Cow position:
Alignm length: 340
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 276

Conread position: 126-336
Cow position:
Alignm length: 220
Alignm identity: 167
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 54, 0

Conread position: 126-627
Cow position:
Alignm length: 535
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 286

Conread position: 127-569
Cow position:
Alignm length: 450
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 139

Conread position: 148-613
Cow position:
Alignm length: 497
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 157

Conread position: 179-623
Cow position:
Alignm length: 465
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 14

Conread position: 179-627
Cow position:
Alignm length: 474
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 14

Conread position: 189-569
Cow position:
Alignm length: 394
Alignm identity: 273
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 22, 32

Conread position: 189-702
Cow position:
Alignm length: 538
Alignm identity: 348
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 26, 153

Conread position: 196-627
Cow position:
Alignm length: 451
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 27

Conread position: 232-613
Cow position:
Alignm length: 407
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 285

Conread position: 248-569
Cow position:
Alignm length: 339
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 157

Conread position: 301-654
Cow position:
Alignm length: 366
Alignm identity: 239
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 6, 49

Conread position: 304-700
Cow position:
Alignm length: 406
Alignm identity: 253
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 92

Conread position: 308-727
Cow position:
Alignm length: 443
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 12

Conread position: 345-627
Cow position:
Alignm length: 299
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 49

Conread position: 345-627
Cow position:
Alignm length: 299
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 49

Conread position: 345-627
Cow position:
Alignm length: 298
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 69, 49

Conread position: 350-627
Cow position:
Alignm length: 294
Alignm identity: 214
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 60, 53

Conread position: 367-697
Cow position:
Alignm length: 344
Alignm identity: 243
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 42, 27

Conread position: 372-613
Cow position:
Alignm length: 256
Alignm identity: 187
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 37, 21

Conread position: 382-710
Cow position:
Alignm length: 351
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 68

Conread position: 412-723
Cow position:
Alignm length: 331
Alignm identity: 226
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 50, 100

Conread position: 413-613
Cow position:
Alignm length: 214
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 99

Conread position: 441-722
Cow position:
Alignm length: 298
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 68

Conread position: 458-619
Cow position:
Alignm length: 174
Alignm identity: 133
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 111, 50

Conread position: 522-720
Cow position:
Alignm length: 203
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 93, 55

Conread position: 568-710
Cow position:
Alignm length: 149
Alignm identity: 118
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 102

Conread position: 568-718
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 42

Conread position: 572-718
Cow position:
Alignm length: 150
Alignm identity: 119
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 42, 104

Show alignments to all cow chromosomes.